##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933402.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 580823 Sequences flagged as poor quality 0 Sequence length 51 %GC 35 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.080678623263886 31.0 28.0 31.0 25.0 34.0 2 27.896465876867826 31.0 25.0 33.0 16.0 34.0 3 27.843959347339894 31.0 25.0 33.0 16.0 34.0 4 32.83383750299144 35.0 32.0 37.0 28.0 37.0 5 34.16880529868824 35.0 33.0 37.0 30.0 37.0 6 33.22410786074243 35.0 32.0 37.0 28.0 37.0 7 33.76656743965029 35.0 33.0 37.0 30.0 37.0 8 33.224035549556405 35.0 32.0 37.0 28.0 37.0 9 34.77183926945042 37.0 34.0 39.0 28.0 39.0 10 34.833811677567866 37.0 33.0 39.0 28.0 39.0 11 35.176907594912734 37.0 34.0 39.0 30.0 39.0 12 35.319257329685634 37.0 34.0 39.0 30.0 39.0 13 35.341007501424706 37.0 34.0 39.0 30.0 39.0 14 36.11863855253666 38.0 34.0 40.0 29.0 41.0 15 36.288871136301424 38.0 34.0 40.0 29.0 41.0 16 36.37763139545094 38.0 34.0 40.0 30.0 41.0 17 35.508951952660276 37.0 33.0 40.0 27.0 41.0 18 35.2944511494896 37.0 33.0 39.0 27.0 40.0 19 34.57720854718219 37.0 33.0 37.0 27.0 40.0 20 33.34599525156545 35.0 32.0 37.0 25.0 39.0 21 33.96548173884299 35.0 33.0 37.0 27.0 39.0 22 34.454014389926016 35.0 33.0 38.0 28.0 40.0 23 34.62072438591447 35.0 33.0 38.0 29.0 40.0 24 34.20547912186673 35.0 33.0 38.0 27.0 40.0 25 33.214004955037936 35.0 32.0 38.0 24.0 40.0 26 33.14926578320762 35.0 31.0 38.0 24.0 40.0 27 33.93010779531802 35.0 33.0 38.0 25.0 40.0 28 33.41185524677914 35.0 33.0 38.0 24.0 40.0 29 33.36284892299375 35.0 33.0 38.0 23.0 40.0 30 32.64337672578393 35.0 31.0 38.0 21.0 40.0 31 32.694077197356165 35.0 32.0 38.0 21.0 40.0 32 31.8818331918674 35.0 31.0 38.0 15.0 40.0 33 30.583050257995982 35.0 25.0 38.0 10.0 40.0 34 30.068885013162358 35.0 23.0 39.0 8.0 40.0 35 29.50026428016797 35.0 21.0 39.0 7.0 40.0 36 28.827703104043746 35.0 18.0 39.0 7.0 40.0 37 28.70533708203704 35.0 18.0 39.0 7.0 40.0 38 28.18498062232384 35.0 18.0 38.0 7.0 40.0 39 28.10592383566078 34.0 17.0 38.0 7.0 40.0 40 27.667867835812288 33.0 15.0 38.0 7.0 40.0 41 27.290868302391605 33.0 15.0 38.0 7.0 40.0 42 27.70978938506223 34.0 15.0 38.0 7.0 40.0 43 27.6023952219523 34.0 15.0 38.0 7.0 40.0 44 27.682631369625515 34.0 15.0 39.0 7.0 40.0 45 27.748357072636587 34.0 15.0 39.0 7.0 40.0 46 27.514721352288046 34.0 15.0 38.0 7.0 40.0 47 27.35106047797694 33.0 15.0 38.0 7.0 40.0 48 27.25773084054867 34.0 15.0 38.0 7.0 40.0 49 27.47154296575721 34.0 15.0 38.0 7.0 40.0 50 27.381257284921567 34.0 13.0 38.0 7.0 40.0 51 26.509962587569706 32.0 12.0 37.0 7.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 7.0 9 17.0 10 26.0 11 34.0 12 49.0 13 79.0 14 123.0 15 188.0 16 357.0 17 714.0 18 1593.0 19 2830.0 20 4512.0 21 6761.0 22 9671.0 23 13633.0 24 19606.0 25 28277.0 26 35908.0 27 36360.0 28 31866.0 29 28265.0 30 27781.0 31 30373.0 32 33880.0 33 38646.0 34 44174.0 35 49639.0 36 50657.0 37 47162.0 38 32999.0 39 4636.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.68469568181701 2.2185760550115954 24.51194253671084 41.58478572646055 2 41.23373213526324 23.1022187482245 25.061335381002475 10.602713735509784 3 9.705538520340964 23.233411900010847 56.27669703162581 10.784352548022374 4 8.406347544776981 2.4219082233313762 76.81978847256393 12.351955759327712 5 24.53673494334763 2.7183840860296513 58.22204010516112 14.522840865461594 6 10.48253943111757 19.374404939198346 61.57504093329638 8.568014696387712 7 40.97857695029295 1.106877654638332 55.31478608801649 2.5997593070522345 8 38.84849601341544 15.684296248598969 41.55327870969297 3.9139290282926127 9 36.553476704607085 2.307932020598358 40.14785915846996 20.990732116324594 10 26.773216625374687 13.949860800966905 46.521057189539675 12.755865384118742 11 23.149909697102217 13.195930601921757 51.13141180703932 12.522747893936707 12 15.605098282953673 12.061677998288635 53.236183828808436 19.09703988994926 13 15.485440487033056 14.161112765851215 61.00653727555555 9.346909471560183 14 13.620844904557844 21.78288394226813 49.711185679630454 14.885085473543574 15 9.028223744583117 13.703658429504342 63.101495636364255 14.166622189548278 16 10.156450416047575 16.287405973936984 49.969612084920875 23.586531525094564 17 11.003352139980683 17.72347169447491 56.77495553722907 14.49822062831534 18 11.235264443728985 15.54897102903983 54.3370355512781 18.878728975953088 19 11.138677359539825 18.637691689206523 50.75591014818628 19.46772080306737 20 14.200195240202266 16.76465980169518 58.409704849842385 10.625440108260175 21 14.010636631125145 23.97615108217133 51.0334473669259 10.979764919777626 22 11.463216849195021 13.423538668406726 55.536884730804395 19.57635975159386 23 13.079371856830738 22.464330785798772 52.67818250999014 11.778114847380355 24 14.426253781272436 16.74675417467972 50.215642286892916 18.611349757154933 25 10.254070517179931 27.686231433672564 48.20814602727509 13.851552021872413 26 11.827183152182334 14.922101914008227 54.22615839937468 19.02455653443476 27 16.465601396638906 18.649571384053317 47.96986345237706 16.91496376693072 28 9.635293368203394 18.89749545042121 54.91879625978999 16.548414921585405 29 16.73917871709626 13.621533582519977 49.09171985269178 20.547567847691983 30 15.13507557379787 22.701236004772536 50.27245821876889 11.891230202660708 31 16.503650854046757 19.570678158406263 45.11236641799653 18.81330456955045 32 21.416162927432282 21.440610995088004 43.699371409190064 13.443854668289651 33 14.243926290797711 21.782367433796527 41.74800240348609 22.225703871919674 34 17.460568882430618 23.587220203056695 39.94332180371645 19.008889110796233 35 18.855830433712164 20.166212426160808 39.13205916432373 21.8458979758033 36 14.523185204442662 25.316662735463304 39.41321194236454 20.746940117729498 37 22.853261664913408 21.034979675391643 40.131503056869306 15.980255602825647 38 16.610223768686847 29.091306645914507 35.35500488100506 18.94346470439359 39 22.334170650955627 25.12228338065125 36.396802468221814 16.146743500171308 40 17.02188102055187 24.699779450882627 37.66190388466021 20.616435643905287 41 16.549447938528605 28.489402107010225 38.392074694011775 16.5690752604494 42 17.055454071205858 21.355559266764573 40.754584443109174 20.834402218920395 43 19.21222127911601 21.043071641446705 37.724057070742724 22.02065000869456 44 20.72851798224244 22.48275292128583 35.834324742649656 20.954404353822078 45 15.78243285820293 21.958668992102588 36.16402931702085 26.09486883267364 46 24.23165060612269 23.831184371142328 33.616093026619126 18.321071996115855 47 14.303496934522222 21.539091943673032 45.485285534491574 18.672125587313175 48 19.10547619498539 24.834760331460703 33.408973129507615 22.650790344046293 49 16.204248110009416 19.77504334366924 41.58943430270495 22.431274243616386 50 18.481533961292858 19.6340365309225 38.907377979177824 22.97705152860682 51 17.723299524984377 20.14520774831575 34.97072257813482 27.160770148565057 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 39.0 1 788.0 2 1537.0 3 19885.5 4 38234.0 5 29563.5 6 20893.0 7 20256.5 8 19620.0 9 19372.5 10 19125.0 11 18363.0 12 17601.0 13 16865.5 14 16130.0 15 15024.0 16 13918.0 17 13081.0 18 12244.0 19 11438.0 20 10632.0 21 9948.5 22 9265.0 23 8672.5 24 8080.0 25 7777.5 26 7323.5 27 7172.0 28 7241.0 29 7310.0 30 7587.5 31 7865.0 32 8523.5 33 9182.0 34 10346.5 35 11511.0 36 12207.5 37 12904.0 38 14032.0 39 15160.0 40 15632.0 41 16104.0 42 16405.5 43 16707.0 44 18717.0 45 20727.0 46 65092.5 47 109458.0 48 73152.5 49 36847.0 50 32316.0 51 27785.0 52 23683.5 53 19582.0 54 17864.5 55 16147.0 56 14948.0 57 13749.0 58 12111.0 59 10473.0 60 9374.0 61 8275.0 62 7210.5 63 6146.0 64 5254.0 65 4362.0 66 3645.0 67 2928.0 68 2403.5 69 1879.0 70 1607.5 71 1336.0 72 1162.5 73 989.0 74 775.5 75 482.0 76 402.0 77 339.5 78 277.0 79 198.5 80 120.0 81 82.5 82 45.0 83 27.0 84 9.0 85 7.5 86 6.0 87 5.5 88 5.0 89 4.5 90 4.0 91 2.5 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 580823.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.42957097933563 #Duplication Level Percentage of deduplicated Percentage of total 1 86.54488032985638 39.316967838433186 2 5.337369292816335 4.849487942618523 3 1.9355046119372272 2.6378743244650114 4 1.1577623717868728 2.1038659138518283 5 0.8065715539015216 1.8321099828941103 6 0.6027585275021334 1.6429836785134802 7 0.48364621407067127 1.538028800770736 8 0.4074313405973041 1.480754480549688 9 0.3288567243149945 1.3445837909369869 >10 2.2775195172835123 17.038445307334964 >50 0.0668747249680157 2.120066049585881 >100 0.04279982397058222 3.597966661535654 >500 0.0026749889981613887 0.6734143633339832 >1k 0.003439271569064643 4.523976513049824 >5k 3.82141285451627E-4 0.9157671478697502 >10k+ 0.001528565141806508 14.383707204256382 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCCGAGAACTTCGTATGCCG 22166 3.8163089271602537 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCGAGAACTTCGTATGC 20294 3.49400764088199 No Hit GAATCTGTCTCTTATACACATCTGACGCCGAGAACTTCGTATGCCGTCTTC 20204 3.4785123867339967 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 20189 3.4759298443759974 No Hit GAACTGTCTCTTATACACATCTGACGCCGAGAACTTCGTATGCCGTCTTCT 5275 0.9081940625629494 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCGAGAACTT 4749 0.8176329105424543 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCGAGAACTTCGTATGCCGTC 4603 0.7924961649245985 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCGAGAACTTCGTA 4185 0.7205293178816955 No Hit GAATGACTGTCTCTTATACACATCTGACGCCGAGAACTTCGTATGCCGTCT 3737 0.6433973861227947 No Hit GCTGTCTCTTATACACATCTGACGCCGAGAACTTCGTATGCCGTCTTCTGC 3626 0.6242865726736029 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCCGAGAACTTCGT 1662 0.28614569326627903 No Hit GAATGCTGTCTCTTATACACATCTGACGCCGAGAACTTCGTATGCCGTCTT 1414 0.24344765961403042 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCCGAGAACTTCGTAT 1064 0.18318833792738923 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCCGAGAACTTCGTATG 1019 0.1754407108533925 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 602 0.10364603330102287 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0995139655282246 0.0 2 1.7216949053326056E-4 0.0 0.0 0.8425974866697772 0.0 3 1.7216949053326056E-4 0.0 0.0 0.948826062328799 0.0 4 1.7216949053326056E-4 0.0 0.0 2.0381424289327383 0.0 5 1.7216949053326056E-4 0.0 0.0 6.0774108463335645 0.0 6 1.7216949053326056E-4 0.0 0.0 6.424504539248618 0.0 7 1.7216949053326056E-4 0.0 0.0 7.236800195584541 0.0 8 1.7216949053326056E-4 0.0 0.0 8.216961105190393 0.0 9 1.7216949053326056E-4 0.0 0.0 8.347982087486205 0.0 10 1.7216949053326056E-4 0.0 0.0 12.91684385776734 0.0 11 1.7216949053326056E-4 0.0 0.0 13.146690127629244 0.0 12 1.7216949053326056E-4 0.0 0.0 17.483123085690476 0.0 13 1.7216949053326056E-4 0.0 0.0 17.8160988803818 0.0 14 1.7216949053326056E-4 0.0 0.0 18.086577150009557 0.0 15 1.7216949053326056E-4 0.0 0.0 19.03368151743302 0.0 16 1.7216949053326056E-4 0.0 0.0 19.489414158874563 0.0 17 1.7216949053326056E-4 0.0 0.0 19.676045886612616 0.0 18 1.7216949053326056E-4 0.0 0.0 19.833236631469482 0.0 19 1.7216949053326056E-4 0.0 0.0 20.961291133443407 0.0 20 1.7216949053326056E-4 0.0 0.0 21.189243538909444 0.0 21 1.7216949053326056E-4 0.0 0.0 21.350910690520177 0.0 22 1.7216949053326056E-4 0.0 0.0 21.67699970559017 0.0 23 1.7216949053326056E-4 0.0 0.0 21.835395636880772 0.0 24 1.7216949053326056E-4 0.0 0.0 21.994996754605104 0.0 25 1.7216949053326056E-4 0.0 0.0 22.10793994039492 0.0 26 1.7216949053326056E-4 0.0 0.0 22.291816956284446 0.0 27 1.7216949053326056E-4 0.0 0.0 22.494976955113692 0.0 28 1.7216949053326056E-4 0.0 0.0 22.618078140844972 0.0 29 1.7216949053326056E-4 0.0 0.0 22.763905699326646 0.0 30 1.7216949053326056E-4 0.0 0.0 22.908528071374583 0.0 31 1.7216949053326056E-4 0.0 0.0 23.055388646799454 0.0 32 1.7216949053326056E-4 0.0 0.0 23.205864781525523 0.0 33 1.7216949053326056E-4 0.0 0.0 23.34824895019653 0.0 34 1.7216949053326056E-4 0.0 0.0 23.558467898137643 0.0 35 1.7216949053326056E-4 0.0 0.0 23.732186914085702 0.0 36 1.7216949053326056E-4 0.0 0.0 23.889721997923637 0.0 37 1.7216949053326056E-4 0.0 0.0 24.070844301964627 0.0 38 1.7216949053326056E-4 0.0 0.0 24.24576850434642 0.0 39 1.7216949053326056E-4 0.0 0.0 24.460636028531926 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAACCCG 20 7.0304004E-4 45.000004 37 GGAACGT 20 7.0304004E-4 45.000004 8 CGTTAGG 35 1.2105374E-7 45.0 2 TATCGGG 35 1.2105374E-7 45.0 3 CGATACG 25 3.8884144E-5 45.0 4 CGTTTTT 18290 0.0 44.483326 1 ACGGCTG 2430 0.0 43.24074 8 CGGCTGT 2505 0.0 43.203594 9 TACGGCT 2445 0.0 42.97546 7 GATACCT 2605 0.0 42.58157 5 TGATACC 2615 0.0 42.50478 4 TGATGCG 85 0.0 42.35294 4 CCGATGA 645 0.0 42.2093 18 CACCGGT 225 0.0 42.0 16 CGACCCT 65 0.0 41.538464 12 TACCTGT 2700 0.0 41.333336 7 ATACCTG 2685 0.0 41.312847 6 GTATGAT 170 0.0 41.02941 1 CCGGTGA 105 0.0 40.714287 18 GATGAAT 725 0.0 40.655174 20 >>END_MODULE