##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933399.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 291846 Sequences flagged as poor quality 0 Sequence length 51 %GC 33 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.395318078712744 31.0 26.0 31.0 16.0 33.0 2 28.281686231779773 31.0 28.0 33.0 16.0 34.0 3 28.404110386984918 31.0 28.0 33.0 16.0 34.0 4 31.87886762196501 35.0 28.0 37.0 19.0 37.0 5 33.68585486866361 35.0 33.0 37.0 28.0 37.0 6 32.34669997190299 35.0 32.0 37.0 17.0 37.0 7 32.50547549049841 35.0 32.0 37.0 26.0 37.0 8 32.66844157535139 35.0 32.0 37.0 25.0 37.0 9 33.32346511516348 35.0 32.0 39.0 25.0 39.0 10 32.573281799305114 37.0 30.0 39.0 17.0 39.0 11 33.28927242449785 37.0 31.0 39.0 17.0 39.0 12 33.93566127341132 37.0 31.0 39.0 25.0 39.0 13 34.082742268182535 37.0 32.0 39.0 26.0 39.0 14 34.48883657819535 37.0 32.0 40.0 25.0 41.0 15 34.77312349663864 37.0 32.0 40.0 25.0 41.0 16 34.95361252167239 37.0 32.0 40.0 26.0 41.0 17 32.95189928935123 36.0 30.0 40.0 19.0 41.0 18 33.421160475045056 36.0 31.0 39.0 24.0 39.0 19 33.03436744036238 36.0 31.0 37.0 23.0 39.0 20 32.16164346950104 34.0 30.0 35.0 24.0 39.0 21 32.64080713801114 35.0 31.0 36.0 24.0 39.0 22 32.471406152559915 34.0 30.0 37.0 24.0 39.0 23 33.407817821727896 35.0 32.0 37.0 26.0 39.0 24 31.96052370085593 35.0 31.0 36.0 21.0 39.0 25 31.316982244060224 34.0 30.0 36.0 18.0 39.0 26 29.91654845363651 33.0 25.0 36.0 18.0 39.0 27 31.960129657422065 34.0 30.0 37.0 22.0 39.0 28 31.88516889044222 35.0 30.0 37.0 21.0 39.0 29 31.893049759119535 35.0 30.0 37.0 21.0 39.0 30 31.210354090856136 34.0 29.0 37.0 18.0 39.0 31 31.455147577832143 34.0 30.0 36.0 19.0 39.0 32 31.21465773044688 35.0 30.0 37.0 16.0 39.0 33 30.713855937720577 35.0 28.0 37.0 14.0 40.0 34 29.593234102917293 35.0 24.0 37.0 8.0 39.0 35 28.904658621327687 34.0 22.0 37.0 7.0 40.0 36 28.035158953694758 33.0 18.0 37.0 7.0 40.0 37 28.018564585432042 34.0 18.0 37.0 7.0 40.0 38 27.842156479787285 33.0 18.0 37.0 7.0 40.0 39 27.30639446831548 33.0 18.0 37.0 7.0 39.0 40 27.044146570451538 33.0 16.0 37.0 7.0 39.0 41 26.343688109482397 31.0 15.0 36.0 7.0 39.0 42 26.792452183685917 33.0 15.0 36.0 7.0 39.0 43 26.84084071736464 33.0 15.0 37.0 7.0 39.0 44 26.77887653077308 33.0 15.0 37.0 7.0 39.0 45 26.911429315460893 33.0 15.0 37.0 7.0 40.0 46 26.610558308148818 33.0 15.0 37.0 7.0 40.0 47 26.574316591627092 33.0 15.0 37.0 7.0 40.0 48 26.40103342173612 33.0 14.0 36.0 7.0 39.0 49 26.314566586487395 32.0 13.0 36.0 7.0 39.0 50 26.478677110530896 33.0 15.0 36.0 7.0 39.0 51 24.825983566675575 29.0 10.0 35.0 7.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 2.0 9 6.0 10 14.0 11 18.0 12 33.0 13 45.0 14 58.0 15 147.0 16 304.0 17 672.0 18 1300.0 19 1990.0 20 2980.0 21 4264.0 22 5958.0 23 8158.0 24 11003.0 25 15090.0 26 18910.0 27 20488.0 28 19246.0 29 18416.0 30 18938.0 31 20222.0 32 22015.0 33 23479.0 34 24688.0 35 26096.0 36 16961.0 37 8499.0 38 1802.0 39 43.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 22.509474174735992 2.03977440156795 25.664220170912056 49.786531252784 2 47.789587659244944 15.585274425553203 25.940735867546582 10.68440204765527 3 9.310047079624185 15.314926365274836 64.49188955819164 10.883136996909329 4 8.760099504533212 2.17546240140348 76.13844287740795 12.925995216655359 5 19.51919848139087 2.4153149263652747 64.15335485153129 13.912131740712569 6 10.829684148489271 13.199084448647575 66.46621848509146 9.505012917771701 7 40.59709572856918 1.0937275138257847 55.73110476072998 2.5780719968750643 8 40.318866799613495 10.5966845528121 45.41950206615818 3.6649465814162263 9 37.14972965193972 2.1648403610123146 44.91889558191649 15.766534405131475 10 23.54666502196364 13.728130589420449 50.01062204039116 12.714582348224749 11 19.415033956264605 11.811023622047244 56.68948692118446 12.08445550050369 12 15.44307614289728 10.503142068077 58.11112710127945 15.942654687746277 13 14.228394427197905 11.596526935438552 64.32193691193301 9.853141725430534 14 11.937460167348533 15.891257718111607 56.907752718899694 15.263529395640166 15 8.815265585274426 11.816848611939173 65.3718056783372 13.996080124449195 16 10.452430391370791 12.527840025218781 55.976096982655235 21.043632600755195 17 11.200770269251592 13.76513640755741 60.76012691625036 14.273966406940646 18 10.938303077650541 12.554909095893038 59.312788251338034 17.193999575118387 19 11.174729137970026 15.768590283916861 55.74618120515614 17.31049937295697 20 13.413581135256264 14.071804993044276 61.53930497591196 10.975308895787505 21 13.44818842814361 18.961370037622583 55.58239619525366 12.008045338980148 22 11.762710470590655 12.025520308655935 58.77654653481631 17.435222685937106 23 12.75398669161133 18.259287432412986 56.570931244560484 12.4157946314152 24 13.078815539702445 13.727102650027753 55.47343461962816 17.72064719064164 25 10.630606552770983 20.69893025773867 53.8924638336657 14.777999355824647 26 11.442336026534543 12.984930408503114 59.53413786723135 16.038595697730994 27 12.946554004509228 14.909232951625173 54.70761977207157 17.436593271794028 28 9.286747120056468 15.718906546603344 60.1652926543451 14.829053678995086 29 14.162948952529758 12.230422894266155 57.22058894074272 16.386039212461366 30 10.909863421119358 17.909445392432996 55.707119508233795 15.473571678213851 31 14.0786579223289 15.346792486448333 52.28819308813553 18.286356503087244 32 15.270724971389022 17.09977179745482 51.63271040206136 15.996792829094797 33 13.136722792157506 15.356043940982572 48.74899775909212 22.758235507767797 34 17.107310019667906 17.436593271794028 50.89464991810749 14.561446790430569 35 12.397291722346719 19.120357997025828 47.4534514778342 21.028898802793254 36 14.575495295464048 23.526448880574 45.14401430891635 16.754041515045607 37 14.441863174413902 19.248850421112504 44.92814703645073 21.38113936802286 38 15.627419940653633 22.115088094405955 42.00091829252414 20.256573672416277 39 19.791945066918853 19.539071976316276 42.294908958834455 18.374073997930417 40 15.506465738780042 18.738992482336574 46.83531725636123 18.919224522522153 41 17.543841615098373 24.934725848563968 41.06103904113814 16.460393495199526 42 14.934588789978276 20.162688541216944 48.140457638617626 16.762265030187155 43 16.38124216196213 21.533274398141486 41.913543444145205 20.171939995751185 44 18.92470686594985 19.919066905148604 41.04699053610466 20.109235692796886 45 15.455411415609602 20.703384661773676 42.603290776642474 21.237913145974247 46 18.979872946691064 22.352199447653902 39.83162352747682 18.836304078178216 47 13.941256690172214 19.10870801724197 47.36950309409757 19.580532198488243 48 18.475154704878598 20.635883308320143 39.700047285212065 21.188914701589194 49 15.091178224131903 18.222281614276024 45.48015049032709 21.206389671264983 50 16.1828498591723 18.568354543149468 42.839031544033496 22.409764053644732 51 16.997320504649714 17.801169109735955 41.88853025225633 23.312980133358003 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 56.0 1 297.0 2 538.0 3 18914.0 4 37290.0 5 25153.5 6 13017.0 7 12452.0 8 11887.0 9 11584.0 10 11281.0 11 10412.0 12 9543.0 13 8783.5 14 8024.0 15 7264.5 16 6505.0 17 5855.5 18 5206.0 19 4765.0 20 4324.0 21 3910.5 22 3497.0 23 3306.0 24 3115.0 25 2906.0 26 2661.0 27 2625.0 28 2774.5 29 2924.0 30 3076.5 31 3229.0 32 3423.0 33 3617.0 34 4145.5 35 4674.0 36 4756.5 37 4839.0 38 5244.0 39 5649.0 40 5910.5 41 6172.0 42 6624.0 43 7076.0 44 8280.0 45 9484.0 46 21676.5 47 33869.0 48 26648.5 49 19428.0 50 17576.0 51 15724.0 52 13324.5 53 10925.0 54 9956.0 55 8987.0 56 8460.5 57 7934.0 58 7250.0 59 6566.0 60 6171.0 61 5776.0 62 5130.5 63 4485.0 64 4089.0 65 3693.0 66 3041.0 67 2389.0 68 2093.0 69 1797.0 70 1433.5 71 1070.0 72 937.5 73 805.0 74 651.5 75 409.5 76 321.0 77 238.5 78 156.0 79 114.0 80 72.0 81 63.5 82 55.0 83 36.0 84 17.0 85 10.5 86 4.0 87 2.5 88 1.0 89 1.5 90 2.0 91 2.0 92 2.0 93 1.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 291846.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.541086622542174 #Duplication Level Percentage of deduplicated Percentage of total 1 82.9542028335977 40.266871454496 2 6.826653781465353 6.627463850964296 3 3.0898104410642526 4.499482688008054 4 1.8820980010603807 3.6543632840634164 5 1.3339688960893699 3.237614986842553 6 0.9714220344392956 2.8292328672458398 7 0.6477097000410983 2.2008372859169034 8 0.5135854637722437 1.9943997188037583 9 0.3846135022785106 1.6802601597270455 >10 1.2734354824444345 9.522027252905973 >50 0.07264526803624248 2.275833615259349 >100 0.042020302099395154 3.855399738321777 >500 0.0028488340406369597 1.1315211032574584 >1k 0.0035610425507961994 4.474573064302256 >5k 7.122085101592399E-4 2.8054670800288037 >10k+ 7.122085101592399E-4 8.94465184985647 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 25873 8.865291969052173 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTCACCGTATCGTATGCCG 8115 2.7805760572356655 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTCACCGTATCGTATGC 4932 1.689932361587961 No Hit GAATCTGTCTCTTATACACATCTGACGCTCACCGTATCGTATGCCGTCTTC 4079 1.3976549275988022 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTCACCGTAT 1489 0.5102005852401609 No Hit GAACTGTCTCTTATACACATCTGACGCTCACCGTATCGTATGCCGTCTTCT 1339 0.45880361560549054 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTCACCGTATCGTATGCCGTC 1104 0.3782816965111737 No Hit GCTGTCTCTTATACACATCTGACGCTCACCGTATCGTATGCCGTCTTCTGC 960 0.32894060566189015 TruSeq Adapter, Index 14 (95% over 23bp) GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTCACCGTATCGTA 919 0.3148921006284136 No Hit GAATGACTGTCTCTTATACACATCTGACGCTCACCGTATCGTATGCCGTCT 757 0.25938337342296963 No Hit GAATGATACCTGTCTCTTCTACACATCTGACGCTCACCGTATCGTATGCCG 637 0.21826579771523336 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 426 0.1459673937624638 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCTCACCGTATCGT 421 0.1442541614413081 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA 411 0.14082769679899673 No Hit GAATCTTTCTCTTATACACATCTGACGCTCACCGTATCGTATGCCGTCTTC 388 0.1329468281216806 No Hit GAATGACTCTCTCTTATACACATCTGACGCTCACCGTATCGTATGCCGTCT 336 0.11512921198166155 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTCACCGTATCGTATGCCC 300 0.10279393926934068 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.426464642311356E-4 0.0 0.0 0.09217189887817548 0.0 2 3.426464642311356E-4 0.0 0.0 0.6023724841183364 0.0 3 3.426464642311356E-4 0.0 0.0 0.7699266051273617 0.0 4 3.426464642311356E-4 0.0 0.0 1.5491046647889641 0.0 5 3.426464642311356E-4 0.0 0.0 3.510070379583753 0.0 6 3.426464642311356E-4 0.0 0.0 3.82290660142678 0.0 7 3.426464642311356E-4 0.0 0.0 4.289248439245355 0.0 8 3.426464642311356E-4 0.0 0.0 4.949185529354523 0.0 9 3.426464642311356E-4 0.0 0.0 5.14757783214435 0.0 10 3.426464642311356E-4 0.0 0.0 8.95540798914496 0.0 11 3.426464642311356E-4 0.0 0.0 9.530368756124805 0.0 12 3.426464642311356E-4 0.0 0.0 12.055673197508275 0.0 13 3.426464642311356E-4 0.0 0.0 12.333216833535495 0.0 14 3.426464642311356E-4 0.0 0.0 12.481240106083344 0.0 15 3.426464642311356E-4 0.0 0.0 13.03153032763855 0.0 16 3.426464642311356E-4 0.0 0.0 13.365610630263907 0.0 17 3.426464642311356E-4 0.0 0.0 13.623623417829952 0.0 18 3.426464642311356E-4 0.0 0.0 13.865874468041364 0.0 19 3.426464642311356E-4 0.0 0.0 14.698162729658792 0.0 20 3.426464642311356E-4 0.0 0.0 14.985643113148715 0.0 21 3.426464642311356E-4 0.0 0.0 15.265242627961323 0.0 22 3.426464642311356E-4 0.0 0.0 15.700060991070632 0.0 23 3.426464642311356E-4 0.0 0.0 15.960472303886297 0.0 24 3.426464642311356E-4 0.0 0.0 16.159549899604585 0.0 25 3.426464642311356E-4 0.0 0.0 16.35040398018133 0.0 26 3.426464642311356E-4 0.0 0.0 16.521727212296895 0.0 27 3.426464642311356E-4 0.0 0.0 16.722860686800573 0.0 28 3.426464642311356E-4 0.0 0.0 16.874310423990735 0.0 29 3.426464642311356E-4 0.0 0.0 17.043235130856683 0.0 30 3.426464642311356E-4 0.0 0.0 17.24025684778959 0.0 31 3.426464642311356E-4 0.0 0.0 17.396160989014753 0.0 32 3.426464642311356E-4 0.0 0.0 17.579476847378412 0.0 33 3.426464642311356E-4 0.0 0.0 17.738464806781657 0.0 34 3.426464642311356E-4 0.0 0.0 17.9193821398957 0.0 35 3.426464642311356E-4 0.0 0.0 18.09207595786819 0.0 36 3.426464642311356E-4 0.0 0.0 18.249350684950283 0.0 37 3.426464642311356E-4 0.0 0.0 18.411079816067378 0.0 38 3.426464642311356E-4 0.0 0.0 18.60981476532144 0.0 39 3.426464642311356E-4 0.0 0.0 18.83047908828629 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTGCGG 35 1.2077726E-7 45.000004 2 ACCGCCT 30 2.1599153E-6 45.000004 14 GCGAGAC 20 7.024626E-4 45.0 21 TCCGACC 20 7.024626E-4 45.0 35 GTCAAGC 20 7.024626E-4 45.0 16 TCAAGCG 20 7.024626E-4 45.0 17 CAAAGTG 20 7.024626E-4 45.0 33 GTCGGGA 25 3.8836304E-5 44.999996 4 CGTTTTT 11995 0.0 44.606087 1 CGATGAA 140 0.0 43.39286 19 GATACCT 1105 0.0 43.16742 5 ACGGCTG 715 0.0 43.11189 8 AATGCTA 95 0.0 42.63158 2 TGATACC 1115 0.0 42.578476 4 AATGATC 230 0.0 42.065216 2 TGATCCG 70 0.0 41.785717 4 TATACTA 70 0.0 41.785717 44 ATGATAC 2870 0.0 41.707317 3 AATGATA 2855 0.0 41.690014 2 ATACCTG 1140 0.0 41.644737 6 >>END_MODULE