##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933398.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 375151 Sequences flagged as poor quality 0 Sequence length 51 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.352260822975282 31.0 28.0 31.0 25.0 34.0 2 28.438148905374103 31.0 26.0 33.0 16.0 34.0 3 28.43634962988237 31.0 26.0 33.0 16.0 34.0 4 33.025603023849065 35.0 32.0 37.0 28.0 37.0 5 34.212506430743886 35.0 33.0 37.0 30.0 37.0 6 33.44791030811593 35.0 32.0 37.0 28.0 37.0 7 33.533755741021615 35.0 32.0 37.0 29.0 37.0 8 33.366609711822704 35.0 33.0 37.0 28.0 37.0 9 34.62721943963897 37.0 34.0 39.0 28.0 39.0 10 34.54691044406119 37.0 32.0 39.0 27.0 39.0 11 34.67418186276993 37.0 33.0 39.0 27.0 39.0 12 34.76649935625921 37.0 34.0 39.0 27.0 39.0 13 34.82127996460092 37.0 34.0 39.0 27.0 39.0 14 35.613382344709194 38.0 34.0 40.0 27.0 41.0 15 35.85853163126315 38.0 34.0 40.0 27.0 41.0 16 35.84775463746598 38.0 34.0 40.0 27.0 41.0 17 35.15689948847264 37.0 33.0 40.0 27.0 41.0 18 35.01338394406519 37.0 33.0 39.0 27.0 40.0 19 34.322198261500034 37.0 32.0 38.0 27.0 40.0 20 33.659606398490205 35.0 32.0 38.0 26.0 40.0 21 34.159725017392994 35.0 33.0 38.0 27.0 40.0 22 34.766669954231766 35.0 33.0 39.0 29.0 40.0 23 35.057854037440926 35.0 33.0 39.0 30.0 40.0 24 34.631785600998 35.0 33.0 39.0 27.0 40.0 25 33.59783127327396 35.0 33.0 38.0 24.0 40.0 26 33.69630628733497 35.0 32.0 38.0 24.0 40.0 27 34.36317642762514 35.0 33.0 39.0 27.0 40.0 28 34.09265069265442 35.0 33.0 39.0 25.0 40.0 29 34.120865997958155 35.0 33.0 39.0 25.0 40.0 30 33.51016257453665 35.0 33.0 39.0 22.0 40.0 31 33.46852334126792 35.0 33.0 39.0 22.0 40.0 32 32.88261526691919 35.0 32.0 39.0 18.0 40.0 33 32.418359540558335 35.0 31.0 39.0 15.0 40.0 34 31.8013573201191 35.0 30.0 39.0 10.0 40.0 35 31.511148844065456 35.0 30.0 40.0 9.0 41.0 36 30.919091245924974 35.0 27.0 39.0 8.0 40.0 37 30.841485161974777 35.0 27.0 39.0 8.0 40.0 38 30.64098989473572 35.0 25.0 39.0 8.0 40.0 39 30.22005272543589 35.0 24.0 39.0 7.0 40.0 40 30.162092064262122 35.0 23.0 39.0 7.0 40.0 41 29.54313862951185 35.0 22.0 39.0 7.0 40.0 42 29.74838664964241 35.0 23.0 39.0 7.0 40.0 43 29.655714632241416 35.0 22.0 39.0 7.0 40.0 44 29.813483104136733 35.0 23.0 39.0 7.0 40.0 45 29.915919189872877 35.0 23.0 39.0 7.0 40.0 46 29.665332092943906 35.0 23.0 39.0 7.0 40.0 47 29.595752110483513 35.0 23.0 39.0 7.0 40.0 48 29.471551455280675 35.0 23.0 38.0 7.0 40.0 49 29.697934964854152 35.0 23.0 39.0 7.0 40.0 50 29.649583767602913 35.0 23.0 39.0 7.0 40.0 51 28.389752393036403 34.0 20.0 38.0 7.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 1.0 7 1.0 8 5.0 9 15.0 10 29.0 11 32.0 12 36.0 13 49.0 14 67.0 15 96.0 16 185.0 17 383.0 18 799.0 19 1329.0 20 2106.0 21 3304.0 22 4643.0 23 6425.0 24 9324.0 25 13755.0 26 17357.0 27 18382.0 28 17918.0 29 16513.0 30 17497.0 31 19730.0 32 23068.0 33 27238.0 34 30893.0 35 35457.0 36 38429.0 37 37912.0 38 28232.0 39 3941.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.677383240348554 2.331327918624767 31.368169083915543 36.62311975711114 2 36.20115633438269 18.754848047852732 31.398023729111745 13.645971888652836 3 12.48084104800467 19.04593083851569 55.04876702980933 13.424461083670309 4 11.238408001044913 2.92522211056348 70.05685710553884 15.779512782852773 5 24.158272269033002 3.305069158818716 55.563759659443804 16.972898912704483 6 13.482304458737948 16.97449826869714 58.30558894951633 11.237608323048585 7 51.88364152034781 1.2986770660347433 44.02600552844055 2.791675885176902 8 50.770756308793 13.126181191040406 32.70363133778132 3.3994311623852793 9 47.9556232023905 2.7586225279953935 31.699235774394847 17.58651849521926 10 30.63166564929855 18.258781130798 37.74986605393561 13.359687165967838 11 27.35938328832923 14.694349741837287 44.21153082358837 13.73473614624511 12 20.47682133327647 13.650236837966577 46.5178021649949 19.35513966376206 13 18.900389443184213 14.928921954093152 54.20297426902767 11.967714333694964 14 16.13616916921453 20.953962537751465 45.97748639881008 16.932381894223923 15 12.566673152943746 14.24919565721536 56.867234793456504 16.31689639638439 16 14.968639294577383 16.861743671215056 44.668146959490976 23.50147007471658 17 15.623042454904827 17.58891752920824 50.57136992837551 16.216670087511428 18 16.425386044552724 15.546273367257452 48.512465647166074 19.515874941023746 19 15.869343277773485 18.838814237467048 44.990950310674904 20.30089217408457 20 18.23399111291187 18.299564708610667 50.69585313647038 12.770591042007084 21 17.594248715850416 24.03352250160602 45.14528816396597 13.226940618577586 22 15.422323277826793 14.160697958955193 50.02598953488062 20.39098922833739 23 15.427387905136866 22.68873067111643 47.549653339588595 14.334228084158113 24 17.159223885848633 17.19734187034021 44.88379345916711 20.759640784644052 25 14.8617490024017 26.798542453572026 42.21740046008141 16.122308083944866 26 15.386870886656306 15.866144565788176 48.05638262992768 20.690601917627834 27 17.84934599667867 18.458167511215485 44.23152277349654 19.460963718609307 28 12.160436730809728 20.778299937891674 49.023193327486794 18.0380700038118 29 18.6495571116697 19.241052269619434 43.86926864116049 18.240121977550373 30 15.116046605233628 21.50520723655275 48.7102526715909 14.668493486622719 31 19.574251434755606 20.23531857838577 41.09838438388809 19.092045602970536 32 24.25450018792433 21.29382568619036 39.87620984616861 14.575464279716702 33 18.09298122622624 18.237456384229283 37.297248308014645 26.372314081529836 34 20.066319961828704 26.945416645564052 37.90980165320097 15.078461739406265 35 20.12416333689634 21.757105805395692 39.35961786054149 18.759112997166476 36 21.375392841815696 29.368707533766404 32.147588571002075 17.108311053415825 37 22.28702575762826 22.56291466636101 38.50182992981493 16.648229646195798 38 20.73191861410472 25.7925475341929 31.294598708253478 22.180935143448906 39 24.681794797294955 25.409768333284465 31.96019736052949 17.94823950889109 40 24.323272495608435 20.94543263912398 34.24567707403152 20.485617791236063 41 23.022996073581037 27.15439916193746 30.76201316269982 19.06059160178168 42 23.041655226828663 21.434835572875986 37.53581891025214 17.987690290043208 43 24.661802847386785 21.28929417754451 32.03590021084843 22.013002764220275 44 23.29382035500372 21.29595816084723 34.86142913120317 20.54879235294588 45 19.527070432972323 21.556120068985553 33.707493782503576 25.209315715538544 46 25.278621141886866 23.95115566798436 31.19170680605943 19.578516384069346 47 16.503221369528536 21.386055215100054 42.1246378125075 19.986085602863913 48 20.77510122590637 26.03991459438999 31.40975233972454 21.7752318399791 49 20.18493886461718 20.502144469826817 38.211546817148296 21.101369848407707 50 21.066450575901438 20.614632507976786 34.822778028047374 23.4961388880744 51 20.018872400713313 20.941434249142347 32.97525529720033 26.064438052944016 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 41.0 1 542.5 2 1044.0 3 11968.0 4 22892.0 5 16988.0 6 11084.0 7 10394.5 8 9705.0 9 9329.0 10 8953.0 11 8513.0 12 8073.0 13 7529.5 14 6986.0 15 6478.5 16 5971.0 17 5563.0 18 5155.0 19 4677.0 20 4199.0 21 4060.5 22 3922.0 23 3771.5 24 3621.0 25 3653.0 26 3825.5 27 3966.0 28 4422.0 29 4878.0 30 5138.0 31 5398.0 32 5758.0 33 6118.0 34 6775.0 35 7432.0 36 7541.5 37 7651.0 38 8195.5 39 8740.0 40 9167.5 41 9595.0 42 10410.5 43 11226.0 44 12503.5 45 13781.0 46 37256.0 47 60731.0 48 41822.5 49 22914.0 50 21613.5 51 20313.0 52 18563.0 53 16813.0 54 16708.0 55 16603.0 56 15960.5 57 15318.0 58 13951.5 59 12585.0 60 11302.0 61 10019.0 62 8797.0 63 7575.0 64 6747.5 65 5920.0 66 4929.5 67 3939.0 68 3437.0 69 2935.0 70 2430.0 71 1925.0 72 1615.5 73 1306.0 74 1111.5 75 755.0 76 593.0 77 474.5 78 356.0 79 244.0 80 132.0 81 113.5 82 95.0 83 61.0 84 27.0 85 18.5 86 10.0 87 6.0 88 2.0 89 2.0 90 2.0 91 2.0 92 2.0 93 1.5 94 1.0 95 1.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 375151.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.56714383916006 #Duplication Level Percentage of deduplicated Percentage of total 1 81.1189970445601 36.963610064178695 2 6.163498844813378 5.617060768282161 3 3.084485300751645 4.216535561073751 4 2.253107802386904 4.106707492659914 5 1.6989464730757697 3.870806915683863 6 1.3135114315665026 3.591177860194312 7 1.0007791462192395 3.192185311490271 8 0.799645432258896 2.9150046745654743 9 0.5735997622346736 2.352357258466984 >10 1.8950166109644802 12.99519970283775 >50 0.06010802047412481 1.863560652444261 >100 0.030643304555436176 2.373757372854073 >500 0.0017678829551213179 0.5042891794366458 >1k 0.0035357659102426358 3.359779666193457 >5k 5.892943183737726E-4 2.6237537658548806 >10k+ 0.0017678829551213179 9.454213753783506 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCATAGCAGGTCGTATGCCG 13070 3.4839304706638123 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11070 2.950811806445938 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCATAGCAGGTCGTATGC 11068 2.95027868778172 No Hit GAATCTGTCTCTTATACACATCTGACGCATAGCAGGTCGTATGCCGTCTTC 9771 2.604551234036428 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCATAGCAGGT 2424 0.6461398210320644 No Hit GAATGATCTGTCTCTTATACACATCTGACGCATAGCAGGTCGTATGCCGTC 2214 0.5901623612891875 No Hit GAATGACTGTCTCTTATACACATCTGACGCATAGCAGGTCGTATGCCGTCT 2029 0.540848884849034 No Hit GCTGTCTCTTATACACATCTGACGCATAGCAGGTCGTATGCCGTCTTCTGC 2003 0.5339183422142018 Illumina Single End Adapter 2 (95% over 21bp) GAACTGTCTCTTATACACATCTGACGCATAGCAGGTCGTATGCCGTCTTCT 1942 0.5176582229555565 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCATAGCAGGTCGTA 1900 0.5064627310069812 No Hit GAATGCTGTCTCTTATACACATCTGACGCATAGCAGGTCGTATGCCGTCTT 689 0.1836593798230579 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCATAGCAGGTCGT 675 0.1799275491735328 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCATAGCAGGTCGTAT 514 0.13701149670399385 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCATAGCAGGTCGTATG 425 0.11328771614629843 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.07570285031893824 0.0 2 0.0 0.0 0.0 0.733038163299578 0.0 3 0.0 0.0 0.0 0.831398556847776 0.0 4 0.0 0.0 0.0 1.4903332258210693 0.0 5 0.0 0.0 0.0 4.4941903393566855 0.0 6 0.0 0.0 0.0 4.774877316067397 0.0 7 0.0 0.0 0.0 5.448206188974573 0.0 8 0.0 0.0 0.0 6.210832438138243 0.0 9 0.0 0.0 0.0 6.335049086901008 0.0 10 0.0 0.0 0.0 10.445660547352933 0.0 11 0.0 0.0 0.0 10.648245639755725 0.0 12 0.0 0.0 0.0 14.200948418103643 0.0 13 0.0 0.0 0.0 14.445649884979648 0.0 14 0.0 0.0 0.0 14.658897350666798 0.0 15 0.0 0.0 0.0 15.329827189584993 0.0 16 0.0 0.0 0.0 15.623042454904825 0.0 17 0.0 0.0 0.0 15.789108918808694 0.0 18 0.0 0.0 0.0 15.916257720224657 0.0 19 0.0 0.0 0.0 16.83162246668675 0.0 20 0.0 0.0 0.0 17.031275406436343 0.0 21 0.0 0.0 0.0 17.15709141119176 0.0 22 0.0 0.0 0.0 17.396728250757693 0.0 23 0.0 0.0 0.0 17.51588027221039 0.0 24 0.0 0.0 0.0 17.634765734330976 0.0 25 0.0 0.0 0.0 17.727794941236994 0.0 26 0.0 0.0 0.0 17.84668040335758 0.0 27 0.0 0.0 0.0 18.021543325221046 0.0 28 0.0 0.0 0.0 18.119370600105025 0.0 29 0.0 0.0 0.0 18.242254452207245 0.0 30 0.0 0.0 0.0 18.382731220228656 0.0 31 0.0 0.0 0.0 18.49681861437128 0.0 32 0.0 0.0 0.0 18.635962585732145 0.0 33 0.0 0.0 0.0 18.759112997166476 0.0 34 0.0 0.0 0.0 18.953967868938108 0.0 35 0.0 0.0 0.0 19.102441416922787 0.0 36 0.0 0.0 0.0 19.24158538828365 0.0 37 0.0 0.0 0.0 19.378596884987644 0.0 38 0.0 0.0 0.0 19.559057552825397 0.0 39 0.0 0.0 0.0 19.887458649983607 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCACGGG 20 7.027206E-4 45.0 3 CGTTCAT 35 1.2090095E-7 45.0 17 CGTTAGG 25 3.885765E-5 45.0 2 TAGGGCG 45 3.8380676E-10 45.0 5 GCTACGA 30 2.1615779E-6 44.999996 10 CGTTTTT 9460 0.0 44.001057 1 TGATCTG 220 0.0 42.954548 4 GATACCT 1400 0.0 42.910713 5 TGATACC 1400 0.0 42.75 4 TACGGCT 1335 0.0 42.30337 7 ACCCGTC 80 0.0 42.1875 17 CACCCGT 75 0.0 42.0 16 ACGGCTG 1345 0.0 41.988846 8 CGGCTGT 1365 0.0 41.20879 9 ATACCTG 1475 0.0 41.186443 6 AATGATC 255 0.0 40.588234 2 TGCGTTG 50 1.0768417E-9 40.5 1 CCGATGA 385 0.0 40.324673 18 GAATCTG 1180 0.0 40.23305 1 CACGACC 90 0.0 40.0 27 >>END_MODULE