##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933397.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 269990 Sequences flagged as poor quality 0 Sequence length 51 %GC 38 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.56378754768695 31.0 28.0 31.0 16.0 33.0 2 28.82277491758954 31.0 30.0 33.0 16.0 34.0 3 29.002718619208117 31.0 30.0 33.0 16.0 34.0 4 31.97499166635801 35.0 30.0 37.0 19.0 37.0 5 33.59819622948998 35.0 33.0 37.0 28.0 37.0 6 32.617411755990965 35.0 33.0 37.0 17.0 37.0 7 31.93789769991481 35.0 31.0 35.0 25.0 37.0 8 32.777217674728696 35.0 32.0 35.0 27.0 37.0 9 32.79528871439683 35.0 31.0 37.0 25.0 39.0 10 31.445749842586764 35.0 27.0 39.0 15.0 39.0 11 31.957620652616765 35.0 27.0 39.0 15.0 39.0 12 32.87278788103263 35.0 31.0 39.0 21.0 39.0 13 32.95943183080855 35.0 31.0 39.0 22.0 39.0 14 33.23920515574651 36.0 31.0 40.0 18.0 41.0 15 33.833804955739105 36.0 31.0 40.0 23.0 41.0 16 34.06383940145931 36.0 32.0 40.0 24.0 41.0 17 32.074843512722694 35.0 27.0 39.0 18.0 41.0 18 32.83032334530908 36.0 30.0 39.0 21.0 39.0 19 32.57266195044261 36.0 30.0 37.0 19.0 39.0 20 32.21208563280121 34.0 30.0 36.0 23.0 39.0 21 32.55500944479425 35.0 31.0 37.0 23.0 39.0 22 32.82051187081003 34.0 30.0 37.0 25.0 39.0 23 33.86279862217119 35.0 32.0 38.0 27.0 40.0 24 32.14417571021149 34.0 30.0 37.0 21.0 39.0 25 31.322223045297974 34.0 29.0 37.0 18.0 39.0 26 30.63924219415534 33.0 25.0 37.0 18.0 39.0 27 32.24447572132301 34.0 30.0 37.0 22.0 39.0 28 32.260576317641394 35.0 31.0 37.0 21.0 39.0 29 32.49485166117264 35.0 31.0 38.0 21.0 40.0 30 31.531456720619282 35.0 30.0 37.0 18.0 40.0 31 31.80755583540131 35.0 30.0 37.0 20.0 40.0 32 31.548449942590466 35.0 30.0 37.0 18.0 40.0 33 31.531101151894514 35.0 30.0 38.0 15.0 40.0 34 30.659283677173228 35.0 29.0 38.0 10.0 40.0 35 30.131015963554205 35.0 27.0 38.0 9.0 40.0 36 29.446868402533426 34.0 24.0 38.0 8.0 40.0 37 29.589247749916662 35.0 24.0 38.0 8.0 40.0 38 29.53585688358828 35.0 23.0 38.0 8.0 40.0 39 29.0480943738657 34.0 23.0 37.0 7.0 40.0 40 28.961657839179228 34.0 23.0 38.0 7.0 40.0 41 28.393777547316567 33.0 21.0 37.0 7.0 40.0 42 28.78899588873662 34.0 22.0 38.0 7.0 40.0 43 28.782558613281974 34.0 21.0 38.0 7.0 40.0 44 28.72999740731138 34.0 21.0 38.0 7.0 40.0 45 28.97809178117708 34.0 22.0 38.0 7.0 40.0 46 28.730930775213896 34.0 22.0 38.0 7.0 40.0 47 28.835093892366384 34.0 22.0 38.0 7.0 40.0 48 28.57239157005815 34.0 22.0 37.0 7.0 40.0 49 28.387906959517018 34.0 21.0 37.0 7.0 39.0 50 28.56810992999741 34.0 22.0 37.0 7.0 40.0 51 26.957953998296233 32.0 20.0 35.0 7.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 5.0 9 13.0 10 11.0 11 20.0 12 26.0 13 45.0 14 100.0 15 171.0 16 384.0 17 620.0 18 1061.0 19 1606.0 20 2396.0 21 3265.0 22 4607.0 23 6331.0 24 8417.0 25 11445.0 26 14540.0 27 15640.0 28 15571.0 29 16144.0 30 17556.0 31 19537.0 32 21975.0 33 23998.0 34 26017.0 35 27316.0 36 19304.0 37 9910.0 38 1928.0 39 30.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 22.656024297196193 2.405274269417386 34.552390829289976 40.38631060409645 2 40.73743471980444 11.523389755176119 34.15015370939665 13.5890218156228 3 13.199377754731657 11.535612430090003 61.57005815030187 13.694951664876475 4 12.144894255342791 2.9952961220785954 68.57476202822326 16.285047594355344 5 19.38442164524612 3.3619763694951663 60.84447572132301 16.4091262639357 6 14.164228304752028 10.958183636430979 62.4767583984592 12.400829660357791 7 53.00307418793289 1.2833808659579984 42.95936886551354 2.7541760805955775 8 54.198674024963886 8.286603207526205 34.24645357235453 3.268269195155376 9 50.29297381384495 2.823808289195896 34.433867921034114 12.449349975925033 10 28.336234675358345 19.1458942923812 39.781843771991554 12.736027260268898 11 24.443868291418198 15.496870254453867 47.12026371347087 12.93899774065706 12 19.959257750287048 14.184229045520205 49.003296418385865 16.853216785806882 13 17.752509352198228 15.425386125412052 54.42683062335642 12.395273899033297 14 15.262417126560242 17.58176228749213 50.2537131004852 16.902107485462427 15 12.868254379791843 14.662765287603245 56.409126263935704 16.05985406866921 16 15.07722508241046 14.801288936627282 48.80551131523389 21.31597466572836 17 15.696136893959038 15.669469239601467 52.00118522908256 16.63320863735694 18 16.243564576465793 14.102374162006 51.19078484388311 18.463276417645098 19 16.326900996333197 17.4350901885255 47.75658357716953 18.481425237971777 20 18.253639023667542 17.142486758768843 51.625986147635096 12.977888069928516 21 17.94140523723101 20.253342716396904 47.46657283603096 14.338679210341123 22 15.859476276899146 14.714248675876885 51.078928849216645 18.347346198007333 23 15.569095151672286 20.065557983629024 49.1466350605578 15.218711804140895 24 15.961702285269824 16.42060817067299 48.518093262713435 19.099596281343754 25 15.377606578021407 21.17004333493833 46.27578799214786 17.176562094892404 26 15.304270528538094 16.62431941923775 49.58072521204489 18.490684840179267 27 15.68391421904515 17.517685840216306 48.11215230193711 18.686247638801436 28 12.744916478388088 19.29849253676062 50.855587243972 17.101003740879293 29 17.263972739731102 17.479165895033148 47.70991518204378 17.54694618319197 30 15.133893847920293 19.474795362791212 49.784806844697954 15.606503944590541 31 17.785103151968592 18.934034593873847 45.48835142042298 17.792510833734582 32 20.781510426312085 19.729989999629616 44.25904663135672 15.229452942701583 33 17.48842549724064 18.08474387940294 42.124893514574616 22.301937108781807 34 18.410681877106562 24.269787769917404 41.553761250416684 15.765769102559354 35 17.809918885884663 22.29156635430942 41.839327382495654 18.05918737731027 36 19.885551316715432 26.117263602355646 36.64283862365273 17.354346457276197 37 20.908922552687137 22.594540538538467 39.915922811956 16.5806140968184 38 19.824437942146005 24.00162968998852 36.26578762176377 19.90814474610171 39 21.884884625356495 24.012000444460906 35.94355346494314 18.159561465239456 40 22.58083632727138 21.115967258046595 37.31841920071114 18.984777213970887 41 21.514130152968626 24.532019704433498 35.52835290195933 18.425497240638542 42 21.146338753287157 21.559687395829474 39.33812363420868 17.95585021667469 43 21.73302714915367 21.27338049557391 36.40060742990482 20.592984925367606 44 21.420793362717138 21.441164487573612 37.67472869365532 19.46331345605393 45 18.678099188858845 22.208970702618615 36.843586799511094 22.269343309011443 46 21.748583280862256 23.409015148709212 35.37501388940331 19.467387681025222 47 16.856920626689877 21.63265306122449 42.028593651616724 19.481832660468907 48 19.634060520760027 24.326826919515536 35.59650357420645 20.442608985517982 49 19.399977776954703 21.005963183821624 38.66920997073966 20.924849068484015 50 19.78702914922775 20.918922923071225 37.046186895810955 22.24786103189007 51 19.68554390903367 20.843734953146413 36.13022704544613 23.340494092373792 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 38.0 1 265.5 2 493.0 3 12694.0 4 24895.0 5 16814.0 6 8733.0 7 8265.5 8 7798.0 9 7628.0 10 7458.0 11 6946.5 12 6435.0 13 5917.5 14 5400.0 15 4907.5 16 4415.0 17 4039.0 18 3663.0 19 3308.5 20 2954.0 21 2798.5 22 2643.0 23 2523.5 24 2404.0 25 2410.0 26 2499.0 27 2582.0 28 2835.0 29 3088.0 30 3452.0 31 3816.0 32 4114.0 33 4412.0 34 4808.5 35 5205.0 36 5522.0 37 5839.0 38 6061.5 39 6284.0 40 6699.5 41 7115.0 42 7820.0 43 8525.0 44 9453.0 45 10381.0 46 18394.0 47 26407.0 48 22082.0 49 17757.0 50 16887.0 51 16017.0 52 14517.0 53 13017.0 54 12290.5 55 11564.0 56 11106.0 57 10648.0 58 9707.5 59 8767.0 60 8078.5 61 7390.0 62 6595.5 63 5801.0 64 5234.5 65 4668.0 66 4071.5 67 3475.0 68 3023.0 69 2571.0 70 2171.0 71 1771.0 72 1463.0 73 1155.0 74 997.0 75 698.5 76 558.0 77 440.5 78 323.0 79 226.0 80 129.0 81 110.0 82 91.0 83 62.5 84 34.0 85 19.5 86 5.0 87 4.5 88 4.0 89 4.0 90 4.0 91 2.5 92 1.0 93 1.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 269990.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.40712309588373 #Duplication Level Percentage of deduplicated Percentage of total 1 79.68632431116409 38.573857099890326 2 7.259454578989007 7.028186228281953 3 3.5666311279940293 5.1795105615125285 4 2.448832272527956 4.741637010297339 5 1.7811963476680404 4.311129542975268 6 1.282713826509419 3.7255491657980095 7 0.9429781169376696 3.1952800448328498 8 0.7465857705327861 2.891205543665263 9 0.5324893788672282 2.3198651019068937 >10 1.6716464462790932 11.883917064077606 >50 0.04327883868302448 1.43058849459051 >100 0.030913456202160343 2.5229834747694557 >500 0.003864182025270043 1.4088902381349009 >1k 0.0015456728101080172 2.3407929421163236 >5k 7.728364050540086E-4 2.0819102961287106 >10k+ 7.728364050540086E-4 6.364697191022057 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 17013 6.301344494240528 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCATAGCAGGTCGTATGCCG 5565 2.0611874513870885 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCATAGCAGGTCGTATGC 3816 1.4133856809511463 No Hit GAATCTGTCTCTTATACACATCTGACGCATAGCAGGTCGTATGCCGTCTTC 2441 0.9041075595392422 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCATAGCAGGT 967 0.35816141338568097 No Hit GCTGTCTCTTATACACATCTGACGCATAGCAGGTCGTATGCCGTCTTCTGC 940 0.3481610430015927 Illumina Single End Adapter 2 (95% over 21bp) GAACTGTCTCTTATACACATCTGACGCATAGCAGGTCGTATGCCGTCTTCT 656 0.24297196192451573 No Hit GAATGATCTGTCTCTTATACACATCTGACGCATAGCAGGTCGTATGCCGTC 607 0.22482314159783695 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCATAGCAGGTCGTA 596 0.22074891662654172 No Hit GAATGACTGTCTCTTATACACATCTGACGCATAGCAGGTCGTATGCCGTCT 458 0.16963591244120155 No Hit GAATGATACCTGTCTCTTCTACACATCTGACGCATAGCAGGTCGTATGCCG 457 0.16926552835290196 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 273 0.10111485610578169 No Hit GAATCTTTCTCTTATACACATCTGACGCATAGCAGGTCGTATGCCGTCTTC 272 0.10074447201748214 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.088892181191896 0.0 2 0.0 0.0 0.0 0.6426163931997482 0.0 3 0.0 0.0 0.0 0.7900292603429757 0.0 4 0.0 0.0 0.0 1.2567132116004296 0.0 5 0.0 0.0 0.0 2.472313789399607 0.0 6 0.0 0.0 0.0 2.7352864920922997 0.0 7 0.0 0.0 0.0 3.0767806215045 0.0 8 0.0 0.0 0.0 3.513833845697989 0.0 9 0.0 0.0 0.0 3.6682840105189083 0.0 10 0.0 0.0 0.0 6.394681284492018 0.0 11 0.0 0.0 0.0 6.828401051890811 0.0 12 0.0 0.0 0.0 8.848475869476648 0.0 13 3.7038408829956663E-4 0.0 0.0 9.03440868180303 0.0 14 3.7038408829956663E-4 0.0 0.0 9.151079669617394 0.0 15 3.7038408829956663E-4 0.0 0.0 9.553687173599021 0.0 16 3.7038408829956663E-4 0.0 0.0 9.789992221934146 0.0 17 3.7038408829956663E-4 0.0 0.0 10.020371124856476 0.0 18 3.7038408829956663E-4 0.0 0.0 10.224823141597836 0.0 19 3.7038408829956663E-4 0.0 0.0 10.870032223415683 0.0 20 3.7038408829956663E-4 0.0 0.0 11.100040742249712 0.0 21 3.7038408829956663E-4 0.0 0.0 11.31671543390496 0.0 22 3.7038408829956663E-4 0.0 0.0 11.651172265639469 0.0 23 3.7038408829956663E-4 0.0 0.0 11.885995777621394 0.0 24 3.7038408829956663E-4 0.0 0.0 12.06748398088818 0.0 25 3.7038408829956663E-4 0.0 0.0 12.215637616208008 0.0 26 3.7038408829956663E-4 0.0 0.0 12.352309344790548 0.0 27 3.7038408829956663E-4 0.0 0.0 12.52972332308604 0.0 28 3.7038408829956663E-4 0.0 0.0 12.668987740286678 0.0 29 3.7038408829956663E-4 0.0 0.0 12.84529056631727 0.0 30 3.7038408829956663E-4 0.0 0.0 13.06085410570762 0.0 31 3.7038408829956663E-4 0.0 0.0 13.203822363791252 0.0 32 3.7038408829956663E-4 0.0 0.0 13.367902514907959 0.0 33 3.7038408829956663E-4 0.0 0.0 13.519759991110782 0.0 34 3.7038408829956663E-4 0.0 0.0 13.712730101114856 0.0 35 3.7038408829956663E-4 0.0 0.0 13.930145560946702 0.0 36 3.7038408829956663E-4 0.0 0.0 14.097559168858107 0.0 37 3.7038408829956663E-4 0.0 0.0 14.25756509500352 0.0 38 3.7038408829956663E-4 0.0 0.0 14.46164672765658 0.0 39 3.7038408829956663E-4 0.0 0.0 14.853142708989221 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTCGTTG 75 0.0 45.000004 1 GCTACGA 35 1.2073178E-7 45.000004 10 CACCGGT 105 0.0 45.000004 16 CCACCGG 105 0.0 45.000004 15 AATGCGA 25 3.882851E-5 45.0 25 TGCGAAT 25 3.882851E-5 45.0 27 CCCCCGT 25 3.882851E-5 45.0 16 TAATGCG 25 3.882851E-5 45.0 24 CTACGAA 30 2.1593114E-6 44.999996 11 CGGTGTC 60 0.0 44.999996 19 CCGGTGA 30 2.1593114E-6 44.999996 18 CGTTTTT 7605 0.0 44.1716 1 TACGGCT 465 0.0 43.54839 7 CCGATGA 115 0.0 43.043476 18 ACCACCG 305 0.0 42.78688 14 GATACCT 690 0.0 42.717392 5 TGATACC 680 0.0 42.683823 4 ACCGGTG 95 0.0 42.63158 17 CGACCAC 535 0.0 41.635513 12 GACCACC 540 0.0 41.250004 13 >>END_MODULE