SRR2933394.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933394.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	717821
Sequences flagged as poor quality	0
Sequence length	51
%GC	32

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	26434	3.6825336678642726	No Hit
GAATCTGTCTCTTATACACATCTGACGCTCGTCGATTCGTATGCCGTCTTC	21376	2.977901175919902	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCTCGTCGATTCGTATGCCG	21189	2.951850113050468	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCTCGTCGATTCGTATGC	17366	2.4192660844416647	No Hit
GAACTGTCTCTTATACACATCTGACGCTCGTCGATTCGTATGCCGTCTTCT	5376	0.7489332298720712	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCTCGTCGATTCGTATGCCGTC	4362	0.60767238629129	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTCGTCGATT	4252	0.5923482316622111	No Hit
GCTGTCTCTTATACACATCTGACGCTCGTCGATTCGTATGCCGTCTTCTGC	3743	0.5214391888785644	No Hit
GAATGACTGTCTCTTATACACATCTGACGCTCGTCGATTCGTATGCCGTCT	3624	0.5048612397798337	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTCGTCGATTCGTA	3249	0.4526198035443377	No Hit
GAATGCTGTCTCTTATACACATCTGACGCTCGTCGATTCGTATGCCGTCTT	2584	0.3599783232867247	No Hit
GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCTCGTCGATTCGT	1434	0.19977125216453684	No Hit
GAATGATACGGCGCTGTCTCTTATACACATCTGACGCTCGTCGATTCGTAT	906	0.12621530994495841	No Hit
GAATGATACGGCCTGTCTCTTATACACATCTGACGCTCGTCGATTCGTATG	825	0.11493115971809129	No Hit
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	776	0.1081049453833198	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA	759	0.10573666694064397	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC	728	0.1014180415451763	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACCGGTG	100	0.0	45.000004	17
CGACGAA	25	3.8893355E-5	45.000004	19
ACCGACG	30	2.1643573E-6	45.000004	17
CGGCGAA	20	7.0315157E-4	45.0	31
ACTGCGA	20	7.0315157E-4	45.0	30
ATACCGG	20	7.0315157E-4	45.0	28
CGTTTTT	28370	0.0	44.49242	1
CGATGAA	630	0.0	43.57143	19
GATACCT	2500	0.0	42.929996	5
CGGCTGT	2290	0.0	42.740173	9
ACGGCTG	2290	0.0	42.34716	8
TGATACC	2525	0.0	42.148514	4
TACGGCT	2310	0.0	42.077923	7
ATACCTG	2560	0.0	41.92383	6
CCGATGA	675	0.0	41.666668	18
GAATGAC	455	0.0	41.53846	1
GATACCG	60	3.6379788E-12	41.250004	27
TACCTGT	2600	0.0	41.19231	7
CGCTTTT	870	0.0	41.12069	1
GAATCTG	2565	0.0	41.05263	1