##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933393.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 394087 Sequences flagged as poor quality 0 Sequence length 51 %GC 31 >>END_MODULE >>Per base sequence quality warn #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.506865235341436 31.0 27.0 31.0 16.0 33.0 2 28.55561335441159 31.0 28.0 33.0 16.0 34.0 3 28.637552114127082 31.0 28.0 33.0 16.0 34.0 4 32.24196180031313 35.0 32.0 37.0 19.0 37.0 5 33.90848974972531 35.0 33.0 37.0 30.0 37.0 6 32.75548038884815 35.0 33.0 37.0 17.0 37.0 7 33.01305549282265 35.0 32.0 37.0 28.0 37.0 8 33.07707181409181 35.0 32.0 37.0 27.0 37.0 9 33.78717389814939 35.0 32.0 39.0 27.0 39.0 10 33.10121622890377 37.0 31.0 39.0 17.0 39.0 11 33.889511706805855 37.0 32.0 39.0 25.0 39.0 12 34.39440275878169 37.0 32.0 39.0 27.0 39.0 13 34.705905041272615 37.0 33.0 39.0 27.0 39.0 14 34.91933253317161 37.0 33.0 40.0 25.0 41.0 15 35.329280082824354 38.0 32.0 40.0 27.0 41.0 16 35.39597094042686 38.0 32.0 40.0 27.0 41.0 17 33.52255466432539 36.0 31.0 40.0 19.0 41.0 18 33.8637255225369 37.0 32.0 39.0 25.0 39.0 19 33.45421696224438 37.0 32.0 37.0 25.0 39.0 20 32.37618596908804 35.0 31.0 35.0 24.0 39.0 21 32.746956890229825 35.0 32.0 36.0 25.0 39.0 22 32.55505763955675 34.0 30.0 37.0 25.0 39.0 23 33.49298758903491 35.0 32.0 37.0 27.0 39.0 24 31.852184923633615 34.0 31.0 36.0 21.0 39.0 25 31.239695803210967 34.0 29.0 36.0 18.0 39.0 26 29.777490757117082 33.0 24.0 36.0 18.0 39.0 27 31.97638846244611 34.0 30.0 37.0 22.0 39.0 28 31.953926417263194 35.0 31.0 37.0 21.0 39.0 29 31.78602440577842 35.0 30.0 37.0 21.0 39.0 30 31.01383450862373 34.0 27.0 36.0 18.0 39.0 31 31.214432346157068 34.0 30.0 36.0 18.0 39.0 32 30.628952490186176 34.0 27.0 37.0 15.0 39.0 33 29.47567161565847 34.0 23.0 37.0 9.0 40.0 34 27.670265702750914 33.0 18.0 37.0 7.0 39.0 35 26.71066541144468 33.0 15.0 37.0 7.0 39.0 36 25.820790840601187 32.0 10.0 37.0 7.0 39.0 37 25.76885560802564 33.0 10.0 37.0 7.0 40.0 38 25.63843263035827 32.0 10.0 37.0 7.0 40.0 39 25.170804923785866 31.0 10.0 37.0 7.0 39.0 40 24.87829083425741 30.0 10.0 36.0 7.0 39.0 41 24.42100094649151 30.0 10.0 36.0 7.0 39.0 42 24.792193094418238 30.0 10.0 37.0 7.0 39.0 43 24.878473535031606 30.0 10.0 37.0 7.0 39.0 44 24.9625742539084 31.0 10.0 37.0 7.0 40.0 45 25.128948683920047 31.0 10.0 37.0 7.0 40.0 46 24.785032239074113 31.0 10.0 37.0 7.0 40.0 47 24.82185405760657 31.0 10.0 37.0 7.0 40.0 48 24.550913884497586 30.0 10.0 37.0 7.0 39.0 49 24.388122419668754 30.0 9.0 36.0 7.0 39.0 50 24.491866009282216 30.0 8.0 37.0 7.0 39.0 51 23.035695163758255 26.0 8.0 35.0 7.0 38.0 >>END_MODULE >>Per sequence quality scores warn #Quality Count 8 1.0 9 6.0 10 10.0 11 19.0 12 25.0 13 47.0 14 82.0 15 195.0 16 466.0 17 1033.0 18 1908.0 19 3209.0 20 5049.0 21 7456.0 22 10428.0 23 14728.0 24 20196.0 25 27720.0 26 32076.0 27 29296.0 28 23600.0 29 20913.0 30 21314.0 31 23238.0 32 25571.0 33 27969.0 34 30164.0 35 30128.0 36 22726.0 37 11964.0 38 2503.0 39 47.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 21.736824609794283 1.84629282366584 25.9541674807847 50.46271508575517 2 52.36204188415249 13.827149842547456 23.79804459421397 10.01276367908609 3 8.144902014022284 13.767518339858963 67.53711743853515 10.550462207583605 4 7.5310781629437145 1.918611880117842 78.72170358321894 11.828606373719508 5 16.91733043718773 2.358869995711607 68.87895312456386 11.8448464425368 6 9.358339655964292 11.445949752212076 70.84400145145615 8.351709140367483 7 37.76678753676219 0.7584619639825724 59.235143508920615 2.2396069903346216 8 38.29382852009836 8.890422673166078 49.592856399728994 3.2228924070065745 9 35.21836548782375 1.7140885134500756 49.29393763306072 13.77360836566545 10 21.069713032908975 9.026433249510895 57.17290852019985 12.730945197380276 11 16.840951363531403 13.260269940393874 58.50256415461561 11.39621454145912 12 11.884177859203678 11.120640873715702 61.834823275063634 15.16035799201699 13 11.988977053290263 12.24805690114112 67.24428869767335 8.518677347895261 14 11.384541991996691 15.766823061912724 60.105255946022076 12.743379000068513 15 8.690720576928443 12.997891328564503 66.87178211917673 11.43960597533032 16 8.857181282305683 12.6966888022188 59.70026922989086 18.745860685584656 17 9.842750458655068 14.537145351153423 63.28069690195313 12.339407288238384 18 10.274127286614378 12.900197164585487 61.87237843420361 14.953297114596523 19 10.514429554895239 16.22662001030229 58.5936607906376 14.665289644164867 20 11.910314219956506 13.966205431795517 64.13152425733404 9.991956090913936 21 11.990245808666614 18.197250860850524 59.367347819136384 10.44515551134648 22 10.259917226399248 12.251609416194901 61.89826104388118 15.59021231352468 23 10.925760047908204 18.101586705473665 59.54091355462119 11.431739691996945 24 11.88544661458003 13.598266372653752 59.09126664924243 15.425020363523789 25 9.534696653277068 19.665708333439063 57.646154275578745 13.153440737705127 26 10.024943730699059 13.552337428029851 62.42657078259369 13.996148058677399 27 11.94279435759109 15.156805476963209 58.27977071052839 14.620629454917317 28 9.994239850591367 14.617076939863532 62.74629713743411 12.64238607211098 29 12.990786298456939 12.02602471027971 60.84874659656371 14.134442394699647 30 10.654500148444379 16.357555565141706 58.91059588365005 14.077348402763857 31 14.461527530722911 13.069449131790694 56.692811485788674 15.776211851697722 32 13.308482644695207 16.767871053853593 56.973460175037495 12.95018612641371 33 12.078551182860638 14.159310000076125 52.18695364221606 21.575185174847178 34 16.770662315681562 17.26725316998531 50.56269300941163 15.399391504921503 35 12.162542788775067 20.23563324849589 45.598053221750526 22.003770740978513 36 17.23984805385613 17.48065782428753 46.332662584657704 18.946831537198637 37 14.44503371083035 20.299578519463974 46.85158353358522 18.40380423612045 38 18.13584310063514 20.73323910710072 41.620251365815164 19.51066642644898 39 20.016646070537725 19.682963406557434 44.01769152496784 16.282698997937004 40 16.41769456998074 22.62114710711087 41.986921669580575 18.974236653327818 41 18.720231826982367 21.510732401728553 43.535056979803954 16.23397879148513 42 16.060413056000325 22.997713702811815 44.30443024002314 16.637443001164716 43 17.2928820285876 19.74589367322444 44.06590422926917 18.895320068918792 44 18.424358073217334 20.7512554334449 40.1188062534415 20.705580239896268 45 16.675251911379974 20.52846198935768 41.09803165290913 21.698254446353214 46 19.188402560855852 22.148155102807248 39.77167478247189 18.89176755386501 47 15.331639967824366 19.17216249203856 45.318927038953326 20.17727050118375 48 18.860302420531507 21.040785410328176 38.39735895880859 21.701553210331728 49 15.414616569437714 20.539627036669568 42.058479472806766 21.98727692108595 50 17.111957511919957 18.737486900100738 41.69307792441771 22.457477663561598 51 17.469492776975642 19.18688005440423 39.1971823480602 24.146444820559925 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 38.0 1 197.5 2 357.0 3 16972.5 4 33588.0 5 25041.0 6 16494.0 7 16198.5 8 15903.0 9 15721.0 10 15539.0 11 15396.5 12 15254.0 13 14709.5 14 14165.0 15 13592.0 16 13019.0 17 12368.0 18 11717.0 19 11008.0 20 10299.0 21 9463.0 22 8627.0 23 8115.5 24 7604.0 25 6999.0 26 6087.0 27 5780.0 28 5717.5 29 5655.0 30 5562.5 31 5470.0 32 5621.0 33 5772.0 34 6261.0 35 6750.0 36 7162.5 37 7575.0 38 8000.5 39 8426.0 40 9241.0 41 10056.0 42 10836.0 43 11616.0 44 13405.5 45 15195.0 46 30047.5 47 44900.0 48 36165.5 49 27431.0 50 24507.0 51 21583.0 52 17901.0 53 14219.0 54 12094.5 55 9970.0 56 8718.0 57 7466.0 58 6556.0 59 5646.0 60 4809.0 61 3972.0 62 3358.0 63 2744.0 64 2292.0 65 1840.0 66 1467.0 67 1094.0 68 938.0 69 782.0 70 613.5 71 445.0 72 355.5 73 266.0 74 225.5 75 151.5 76 118.0 77 89.0 78 60.0 79 50.0 80 40.0 81 29.5 82 19.0 83 12.5 84 6.0 85 5.5 86 5.0 87 4.0 88 3.0 89 1.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 394087.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.47770057739575 #Duplication Level Percentage of deduplicated Percentage of total 1 86.98741667269762 51.73811522859872 2 6.541843765568863 7.781876494252159 3 2.5154292048080293 4.4883583520162595 4 1.350639103854705 3.21331632828769 5 0.8139696223335885 2.4206520738126542 6 0.5037672619792349 1.797775102121725 7 0.329160728193102 1.3704406263314808 8 0.20070533868691595 0.9549993630964152 9 0.15264195998913535 0.8170913512602552 >10 0.5195073844096105 5.316284233900548 >50 0.03856013885537933 1.6255279352176168 >100 0.04029317880388206 4.699806354227901 >500 0.0025995599228311 1.140807255738947 >1k 0.0017330399485540667 1.7115974232252282 >5k 0.00129977996141555 5.283481175607777 >10k+ 4.332599871385167E-4 5.63987070230463 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 21886 5.553596033363192 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTCGTCGATTCGTATGCCG 8757 2.222098166140979 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTCGTCGATTCGTATGC 6148 1.5600616107610756 No Hit GAATCTGTCTCTTATACACATCTGACGCTCGTCGATTCGTATGCCGTCTTC 5598 1.420498519362476 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTCGTCGATT 1880 0.4770520215079411 No Hit GAACTGTCTCTTATACACATCTGACGCTCGTCGATTCGTATGCCGTCTTCT 1877 0.47629076828213057 No Hit GCTGTCTCTTATACACATCTGACGCTCGTCGATTCGTATGCCGTCTTCTGC 1583 0.40168795215269726 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTCGTCGATTCGTATGCCGTC 1302 0.33038390000177625 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTCGTCGATTCGTA 980 0.24867605376477786 No Hit GAATGCTGTCTCTTATACACATCTGACGCTCGTCGATTCGTATGCCGTCTT 819 0.2078221306462786 No Hit GAATGACTGTCTCTTATACACATCTGACGCTCGTCGATTCGTATGCCGTCT 779 0.19767208763547137 No Hit GAATGATACCTGTCTCTTCTACACATCTGACGCTCGTCGATTCGTATGCCG 697 0.17686449946331648 No Hit GAATCTTTCTCTTATACACATCTGACGCTCGTCGATTCGTATGCCGTCTTC 632 0.16037067957075468 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCTCGTCGATTCGT 520 0.13195055914049436 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC 491 0.1245917779576591 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 458 0.1162179924737431 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTT 457 0.11596424139847293 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTCGTCGCTTCGTATGCCG 427 0.10835170914036747 No Hit GAATGACTCTCTCTTATACACATCTGACGCTCGTCGATTCGTATGCCGTCT 408 0.10353043871023403 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.10606794946293585 0.0 2 0.0 0.0 0.0 0.6828441435520582 0.0 3 0.0 0.0 0.0 0.8901587720477966 0.0 4 0.0 0.0 0.0 1.6722195860304958 0.0 5 0.0 0.0 0.0 3.6129078096968437 0.0 6 0.0 0.0 0.0 4.176235196796647 0.0 7 0.0 0.0 0.0 4.660899750562693 0.0 8 0.0 0.0 0.0 5.334355104329755 0.0 9 0.0 0.0 0.0 5.581254900567641 0.0 10 0.0 0.0 0.0 8.697825607036009 0.0 11 0.0 0.0 0.0 9.262675500587434 0.0 12 0.0 0.0 0.0 11.622814251675392 0.0 13 0.0 0.0 0.0 11.915896743612452 0.0 14 0.0 0.0 0.0 12.080834942538068 0.0 15 0.0 0.0 0.0 12.547990672110473 0.0 16 0.0 0.0 0.0 12.875075808133737 0.0 17 0.0 0.0 0.0 13.162575776414853 0.0 18 0.0 0.0 0.0 13.434089426953946 0.0 19 0.0 0.0 0.0 14.24837662749596 0.0 20 0.0 0.0 0.0 14.510247737174787 0.0 21 0.0 0.0 0.0 14.800285216208604 0.0 22 0.0 0.0 0.0 15.203749425888192 0.0 23 0.0 0.0 0.0 15.495563162448901 0.0 24 0.0 0.0 0.0 15.738656692557734 0.0 25 0.0 0.0 0.0 15.94038879739753 0.0 26 0.0 0.0 0.0 16.144150910839485 0.0 27 0.0 0.0 0.0 16.3474055221309 0.0 28 0.0 0.0 0.0 16.54000258826097 0.0 29 0.0 0.0 0.0 16.75112348288576 0.0 30 0.0 0.0 0.0 16.97670818880095 0.0 31 0.0 0.0 0.0 17.197471624286006 0.0 32 0.0 0.0 0.0 17.41011502536242 0.0 33 0.0 0.0 0.0 17.622758426438832 0.0 34 0.0 0.0 0.0 17.840730600095917 0.0 35 0.0 0.0 0.0 18.061747786656245 0.0 36 0.0 0.0 0.0 18.272107428055225 0.0 37 0.0 0.0 0.0 18.494139618916634 0.0 38 0.0 0.0 0.0 18.699424238810213 0.0 39 0.0 0.0 0.0 18.899887588273657 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGTTTCG 20 7.0276385E-4 45.0 1 CGGGTAG 20 7.0276385E-4 45.0 6 ACCGGTG 75 0.0 45.0 17 GCGACCG 25 3.8861243E-5 45.0 11 GGACTCA 20 7.0276385E-4 45.0 8 CCGTGTC 25 3.8861243E-5 45.0 19 CGACCGC 25 3.8861243E-5 45.0 12 TCCCGAG 20 7.0276385E-4 45.0 45 TCGAGGG 20 7.0276385E-4 45.0 3 TTCGCTG 40 6.7957444E-9 45.0 1 TGCGTTG 25 3.8861243E-5 45.0 1 GGGCAAC 30 2.161858E-6 44.999996 7 CGTTTTT 17645 0.0 44.706715 1 CCGATGA 190 0.0 43.81579 18 CGATGAA 165 0.0 43.636364 19 TACGGCT 870 0.0 43.189655 7 CACCGGT 105 0.0 42.857143 16 ACGGCTG 875 0.0 42.685715 8 GATACCT 1140 0.0 41.842106 5 AATGATC 280 0.0 41.785713 2 >>END_MODULE