##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933390.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 656469 Sequences flagged as poor quality 0 Sequence length 51 %GC 37 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.478252590754476 31.0 28.0 33.0 25.0 34.0 2 28.834027197019203 31.0 28.0 33.0 16.0 34.0 3 28.839214037525 31.0 28.0 34.0 16.0 34.0 4 33.171296740592474 35.0 32.0 37.0 28.0 37.0 5 34.22483163713747 35.0 33.0 37.0 30.0 37.0 6 33.703582347376646 35.0 33.0 37.0 28.0 37.0 7 33.55019048881211 35.0 32.0 37.0 29.0 37.0 8 33.62425339201089 35.0 33.0 37.0 28.0 37.0 9 34.67462439201242 37.0 34.0 39.0 28.0 39.0 10 34.56118720000487 37.0 32.0 39.0 27.0 39.0 11 34.85056720119305 37.0 34.0 39.0 27.0 39.0 12 35.01637853424914 37.0 34.0 39.0 27.0 39.0 13 35.234390352019666 37.0 34.0 39.0 30.0 39.0 14 35.883124717237216 38.0 34.0 40.0 27.0 41.0 15 36.36216333139874 38.0 34.0 40.0 30.0 41.0 16 36.2135576851306 38.0 34.0 40.0 30.0 41.0 17 35.48420869835438 37.0 33.0 40.0 27.0 41.0 18 35.30074687456681 37.0 33.0 39.0 27.0 40.0 19 34.64534806670231 37.0 33.0 38.0 27.0 40.0 20 34.10831585345233 35.0 33.0 38.0 27.0 40.0 21 34.31062395939488 35.0 33.0 38.0 27.0 40.0 22 34.84843762614838 35.0 33.0 39.0 29.0 40.0 23 35.20739897847423 35.0 34.0 39.0 30.0 40.0 24 34.629204120834345 35.0 33.0 39.0 27.0 40.0 25 33.490108443810755 35.0 32.0 38.0 24.0 40.0 26 33.63606506933305 35.0 32.0 38.0 24.0 40.0 27 34.38505245487601 35.0 33.0 39.0 26.0 40.0 28 34.19342878338505 35.0 33.0 39.0 25.0 40.0 29 34.189318916811 35.0 33.0 39.0 24.0 40.0 30 33.398486447951086 35.0 33.0 39.0 21.0 40.0 31 33.34535065631431 35.0 33.0 39.0 21.0 40.0 32 32.75739143813341 35.0 32.0 39.0 18.0 40.0 33 32.168967613093685 35.0 31.0 39.0 13.0 40.0 34 31.630140951057857 36.0 30.0 40.0 10.0 41.0 35 31.125730232501457 36.0 27.0 40.0 8.0 41.0 36 30.54801521473215 35.0 24.0 40.0 7.0 41.0 37 30.449763812152593 36.0 23.0 40.0 7.0 41.0 38 30.239677730403113 35.0 23.0 39.0 7.0 41.0 39 29.849336373842483 35.0 22.0 39.0 7.0 40.0 40 29.83014277901927 35.0 22.0 39.0 7.0 40.0 41 29.388882034033596 35.0 21.0 39.0 7.0 40.0 42 29.564718212131876 35.0 21.0 39.0 7.0 40.0 43 29.455686407126613 35.0 21.0 39.0 7.0 40.0 44 29.436503475411634 35.0 20.0 39.0 7.0 40.0 45 29.534646723607665 35.0 20.0 39.0 7.0 40.0 46 29.30267689715737 35.0 20.0 39.0 7.0 40.0 47 29.312054339199566 35.0 20.0 39.0 7.0 40.0 48 29.104963067562977 35.0 20.0 39.0 7.0 40.0 49 29.270232105400254 35.0 20.0 39.0 7.0 40.0 50 29.269241959635565 35.0 20.0 39.0 7.0 40.0 51 28.279877648449506 34.0 20.0 38.0 7.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 15.0 9 41.0 10 39.0 11 50.0 12 62.0 13 99.0 14 139.0 15 171.0 16 390.0 17 667.0 18 1449.0 19 2601.0 20 4202.0 21 6472.0 22 8972.0 23 13027.0 24 18744.0 25 27147.0 26 33197.0 27 33710.0 28 29336.0 29 26730.0 30 26896.0 31 29525.0 32 34776.0 33 41902.0 34 49309.0 35 59760.0 36 68362.0 37 73852.0 38 56648.0 39 8176.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.21154845087887 2.6505440470151678 34.639107101782415 37.49880040032355 2 38.30036147936917 13.723420298597496 33.52664025262427 14.449577969409066 3 12.690774431085094 14.01284752212214 58.37929894633258 14.91707910046019 4 11.315842789225385 3.0732601234787933 68.70469131063311 16.906205776662723 5 19.56406166932483 3.7747403152319454 59.61621950160632 17.044978513836906 6 13.98801771294608 12.847065131788401 62.345365889326075 10.819551265939442 7 54.50234512216113 1.3921449451535413 41.44978666167024 2.6557232710150824 8 54.17178876687247 9.007279856322233 33.63860288909301 3.182328487712291 9 50.70445062904723 3.1273373152426087 33.341711489803785 12.826500565906388 10 27.386974860960684 17.509890032888073 41.5836848350798 13.519450271071445 11 22.94457164009268 18.102911180878305 44.9712019912593 13.981315187769718 12 16.994557244896562 16.326589679025208 49.45960890765596 17.21924416842227 13 17.135310273600123 16.774592555017833 53.89683290452405 12.193264266857993 14 15.284956334571778 21.536432032586458 47.769506252389675 15.409105380452084 15 13.108920604019383 17.265857184421503 54.40104559392751 15.224176617631603 16 14.72087790893401 18.491962301342486 47.03497042510766 19.752189364615845 17 15.502636072685839 19.03882742368642 49.864045370002245 15.594491133625501 18 15.744840959740673 17.62733655359202 49.56106076600723 17.066761720660075 19 15.61718832115454 20.180389325314678 45.92707347947885 18.275348874051936 20 17.4183396321837 19.239598518741936 50.33946766717088 13.002594181903488 21 17.23325853924557 22.459095555159497 47.234218218986726 13.073427686608202 22 15.930074382796446 16.444340859964445 49.26508334742387 18.36050140981524 23 15.681319300682897 21.80300973846442 47.959157248857146 14.556513711995539 24 16.393157940435877 19.239903178977226 46.89680700840405 17.470131872182844 25 14.18589453576635 24.949235988294955 45.11439230184517 15.750477174093522 26 14.853862101637702 18.223861294288078 48.84328125166611 18.07899535240811 27 17.026241909366625 20.006428330964603 45.64495810160114 17.32237165806763 28 13.880015659536094 20.425336154487113 48.401219250261626 17.293428935715166 29 16.795614111252778 18.512831527459788 45.45073720160434 19.240817159683093 30 15.502636072685839 23.633560762198975 45.89081891147945 14.972984253635738 31 18.71908650675051 18.789920011455223 43.7511900790441 18.73980340275017 32 17.738689869590186 21.4066467723533 42.484869811064954 18.369793546991556 33 16.29079210137874 20.005971340611666 40.58714120544915 23.11609535256044 34 17.692990834296822 21.56293747305661 41.506910455786944 19.237161236859624 35 15.658926773389148 25.276441080995447 39.86113586475523 19.20349628086018 36 19.60062089755952 22.595735670686658 37.36002766314937 20.44361576860446 37 16.64511195501996 25.92475806169065 37.890441132787686 19.539688850501697 38 20.16683194484431 24.492702625714237 34.741777601074844 20.59868782836661 39 19.155664623919787 23.513676959612717 37.26070842644511 20.069949990022376 40 18.22294731358221 24.04287178830988 38.291526332545786 19.44265456556212 41 18.18440779381814 25.428009548051772 37.88358627749368 18.503996380636405 42 18.027507772644253 24.282944053717692 38.948373799829085 18.74117437380897 43 19.330844259211023 23.22089847349989 35.87511367635029 21.573143590938795 44 19.95417910061252 24.9688865734711 34.35364046131652 20.72329386459985 45 18.577876487694013 23.591365319611437 35.3940551648288 22.436703027865747 46 20.804485817304396 25.136145042644813 33.823836312148785 20.235532827902002 47 16.556608156668478 23.766392624785023 39.58663699275975 20.09036222578675 48 19.237618227212558 25.114057175586357 34.03070061191008 21.617623985291004 49 17.863600566058718 23.138335549736546 38.21109603042947 20.786967853775273 50 18.32272354063939 22.819660943624147 36.5275435702219 22.33007194551456 51 18.330187716403973 23.30087178526328 34.46895436037345 23.899986137959296 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 53.0 1 847.5 2 1642.0 3 18497.0 4 35352.0 5 27257.0 6 19162.0 7 18403.5 8 17645.0 9 17341.5 10 17038.0 11 16563.5 12 16089.0 13 15501.0 14 14913.0 15 14169.5 16 13426.0 17 12652.5 18 11879.0 19 11233.5 20 10588.0 21 10198.5 22 9809.0 23 9418.0 24 9027.0 25 8909.0 26 9005.5 27 9220.0 28 9700.5 29 10181.0 30 10702.0 31 11223.0 32 12105.0 33 12987.0 34 14630.5 35 16274.0 36 17641.0 37 19008.0 38 20140.5 39 21273.0 40 22390.0 41 23507.0 42 24354.0 43 25201.0 44 26992.5 45 28784.0 46 55537.0 47 82290.0 48 61345.0 49 40400.0 50 38064.5 51 35729.0 52 31599.5 53 27470.0 54 26046.0 55 24622.0 56 23036.0 57 21450.0 58 19344.0 59 17238.0 60 15170.5 61 13103.0 62 11614.0 63 10125.0 64 8489.0 65 6853.0 66 5826.5 67 4800.0 68 4091.5 69 3383.0 70 2783.0 71 2183.0 72 1855.0 73 1527.0 74 1230.5 75 797.5 76 661.0 77 501.5 78 342.0 79 253.0 80 164.0 81 118.0 82 72.0 83 50.0 84 28.0 85 18.5 86 9.0 87 9.0 88 9.0 89 6.0 90 3.0 91 2.5 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 656469.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.95763135318978 #Duplication Level Percentage of deduplicated Percentage of total 1 81.74211452617685 41.65384538055139 2 6.503953629431958 6.628521427736687 3 3.2614700193695736 4.985903607495463 4 2.116967769233164 4.315026526846724 5 1.6065344828753676 4.093259596727518 6 1.2057585238639534 3.6865559016015377 7 0.8989043357554969 3.2064225034248772 8 0.6462399075317873 2.6344683978979417 9 0.4835406229229647 2.2176076326480163 >10 1.4510620655515187 10.83332019191061 >50 0.04946553497847015 1.7188334237584337 >100 0.029133070550569424 2.724771977615249 >500 0.0018208169094103227 0.6699042115226038 >1k 0.0018208169094103227 2.5328626686354405 >5k 3.0346948490172045E-4 1.3988812320945232 >10k+ 9.104084547051614E-4 6.699815319532967 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 16850 2.5667624823106654 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCAGCCTTTTCGTATGCCG 14193 2.162021359729096 No Hit GAATCTGTCTCTTATACACATCTGACGCCAGCCTTTTCGTATGCCGTCTTC 12282 1.8709185049103614 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCAGCCTTTTCGTATGC 9046 1.377978244212598 No Hit GAACTGTCTCTTATACACATCTGACGCCAGCCTTTTCGTATGCCGTCTTCT 2986 0.4548577312866259 TruSeq Adapter, Index 20 (95% over 22bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCAGCCTTTT 2960 0.4508971482278676 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCAGCCTTTTCGTATGCCGTC 2874 0.4377967581104363 No Hit GCTGTCTCTTATACACATCTGACGCCAGCCTTTTCGTATGCCGTCTTCTGC 2666 0.40611209364036993 TruSeq Adapter, Index 23 (95% over 22bp) GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCAGCCTTTTCGTA 2565 0.3907267517582704 No Hit GAATGACTGTCTCTTATACACATCTGACGCCAGCCTTTTCGTATGCCGTCT 2328 0.35462451387651206 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCCAGCCTTTTCGT 987 0.1503498261151707 No Hit GAATGCTGTCTCTTATACACATCTGACGCCAGCCTTTTCGTATGCCGTCTT 873 0.13298419270369202 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCCAGCCTTTTCGTAT 727 0.11074399552758775 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.5233011764454986E-4 0.0 0.0 0.08241059364570147 0.0 2 1.5233011764454986E-4 0.0 0.0 0.6087111501076212 0.0 3 1.5233011764454986E-4 0.0 0.0 0.7115339795176924 0.0 4 1.5233011764454986E-4 0.0 0.0 1.3203974597429582 0.0 5 1.5233011764454986E-4 0.0 0.0 3.692025061350955 0.0 6 1.5233011764454986E-4 0.0 0.0 3.9404754832292155 0.0 7 1.5233011764454986E-4 0.0 0.0 4.439661278750406 0.0 8 1.5233011764454986E-4 0.0 0.0 5.070003305563553 0.0 9 1.5233011764454986E-4 0.0 0.0 5.185469534738122 0.0 10 1.5233011764454986E-4 0.0 0.0 7.883540578458389 0.0 11 1.5233011764454986E-4 0.0 0.0 8.129401388336692 0.0 12 1.5233011764454986E-4 0.0 0.0 10.007022418423414 0.0 13 1.5233011764454986E-4 0.0 0.0 10.215714679596447 0.0 14 1.5233011764454986E-4 0.0 0.0 10.38525810053483 0.0 15 1.5233011764454986E-4 0.0 0.0 10.938521087819836 0.0 16 1.5233011764454986E-4 0.0 0.0 11.209821027344779 0.0 17 1.5233011764454986E-4 0.0 0.0 11.382106390400764 0.0 18 3.0466023528909973E-4 0.0 0.0 11.526972332280732 0.0 19 3.0466023528909973E-4 0.0 0.0 12.22159766873988 0.0 20 3.0466023528909973E-4 0.0 0.0 12.422064103560107 0.0 21 3.0466023528909973E-4 0.0 0.0 12.5718046092047 0.0 22 3.0466023528909973E-4 0.0 0.0 12.809134932494908 0.0 23 3.0466023528909973E-4 0.0 0.0 12.950954272021985 0.0 24 3.0466023528909973E-4 0.0 0.0 13.085157105666832 0.0 25 3.0466023528909973E-4 0.0 0.0 13.194682460253263 0.0 26 3.0466023528909973E-4 0.0 0.0 13.318222185662995 0.0 27 3.0466023528909973E-4 0.0 0.0 13.470247643072256 0.0 28 3.0466023528909973E-4 0.0 0.0 13.592568727540828 0.0 29 3.0466023528909973E-4 0.0 0.0 13.725705250362164 0.0 30 3.0466023528909973E-4 0.0 0.0 13.87620740659498 0.0 31 3.0466023528909973E-4 0.0 0.0 14.022139659298459 0.0 32 3.0466023528909973E-4 0.0 0.0 14.174469776943008 0.0 33 3.0466023528909973E-4 0.0 0.0 14.330303487293383 0.0 34 3.0466023528909973E-4 0.0 0.0 14.519649823525558 0.0 35 3.0466023528909973E-4 0.0 0.0 14.690716545640388 0.0 36 3.0466023528909973E-4 0.0 0.0 14.84715957646134 0.0 37 3.0466023528909973E-4 0.0 0.0 15.021577561164351 0.0 38 3.0466023528909973E-4 0.0 0.0 15.198128167514383 0.0 39 3.0466023528909973E-4 0.0 0.0 15.414436934569645 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGATCCG 25 3.888971E-5 45.0 4 ACCGGTG 75 0.0 45.0 17 GCGATCG 25 3.888971E-5 45.0 9 CTAGCGG 25 3.888971E-5 45.0 2 TACGGTG 30 2.1640735E-6 44.999996 7 CGTTTTT 16740 0.0 44.193546 1 CCGATGA 470 0.0 42.12766 18 GAATGAC 335 0.0 41.641792 1 CACCGGT 115 0.0 41.086956 16 TACGGCT 1090 0.0 41.07798 7 ACGGCTG 1090 0.0 41.07798 8 GATACCT 1660 0.0 41.06928 5 TGATACC 1670 0.0 40.95808 4 CGATGAA 485 0.0 40.824745 19 ATACCTG 1695 0.0 40.22124 6 GGCGATA 45 1.9261279E-8 40.0 8 ATACGCC 45 1.9261279E-8 40.0 6 GTACGGG 45 1.9261279E-8 40.0 3 CGGCTGT 1155 0.0 39.545456 9 AATGATC 400 0.0 39.375 2 >>END_MODULE