##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933389.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 426478 Sequences flagged as poor quality 0 Sequence length 51 %GC 37 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.656050253471456 31.0 28.0 31.0 16.0 33.0 2 29.06729303738997 31.0 30.0 33.0 16.0 34.0 3 29.237121258306406 31.0 30.0 33.0 16.0 34.0 4 32.17220583476756 35.0 31.0 37.0 19.0 37.0 5 33.62097458720028 35.0 33.0 37.0 28.0 37.0 6 32.88003367113895 35.0 33.0 37.0 23.0 37.0 7 32.02107963365051 35.0 31.0 35.0 25.0 37.0 8 33.05530883187409 35.0 32.0 35.0 28.0 37.0 9 32.798360056087304 35.0 31.0 37.0 25.0 39.0 10 31.717605597475135 35.0 28.0 39.0 15.0 39.0 11 32.37978981330807 35.0 30.0 39.0 17.0 39.0 12 33.21494426441692 35.0 31.0 39.0 23.0 39.0 13 33.36066807666515 35.0 32.0 39.0 25.0 39.0 14 33.36679734945296 36.0 31.0 39.0 18.0 41.0 15 34.0663551226558 36.0 32.0 40.0 25.0 41.0 16 34.16485258325166 37.0 32.0 40.0 25.0 41.0 17 32.100750800744706 35.0 27.0 39.0 17.0 41.0 18 32.92568901561159 36.0 30.0 39.0 21.0 39.0 19 32.771807689962905 36.0 30.0 37.0 19.0 39.0 20 32.5263671279644 34.0 30.0 37.0 24.0 39.0 21 32.74631282270129 35.0 31.0 37.0 24.0 39.0 22 33.05963496358546 35.0 31.0 38.0 25.0 39.0 23 34.11439277055323 35.0 33.0 38.0 27.0 40.0 24 32.25478688232453 35.0 30.0 37.0 21.0 39.0 25 31.287606863660024 34.0 28.0 37.0 18.0 39.0 26 30.74983234774127 33.0 25.0 37.0 18.0 39.0 27 32.40397628951552 34.0 30.0 38.0 22.0 39.0 28 32.45551470415825 35.0 31.0 38.0 21.0 39.0 29 32.66708013074531 35.0 31.0 38.0 21.0 40.0 30 31.546597948780477 35.0 29.0 38.0 18.0 40.0 31 31.831034660639002 35.0 30.0 38.0 20.0 40.0 32 31.690797649585676 35.0 30.0 38.0 18.0 40.0 33 31.599055519862688 35.0 30.0 38.0 15.0 40.0 34 30.71446827268933 35.0 28.0 38.0 10.0 40.0 35 30.109025553486934 35.0 26.0 38.0 8.0 40.0 36 29.533652380662073 35.0 24.0 38.0 7.0 40.0 37 29.640405835705476 35.0 24.0 38.0 7.0 40.0 38 29.602443736839884 35.0 23.0 38.0 7.0 40.0 39 29.21158418488175 34.0 23.0 38.0 7.0 40.0 40 29.118282771913204 34.0 23.0 38.0 7.0 40.0 41 28.659637777329664 34.0 21.0 38.0 7.0 40.0 42 29.075907784223336 34.0 22.0 38.0 7.0 40.0 43 29.07915296920357 34.0 22.0 38.0 7.0 40.0 44 28.96171901012479 34.0 22.0 38.0 7.0 40.0 45 29.18523581521204 35.0 23.0 38.0 7.0 40.0 46 28.995263530592435 34.0 22.0 38.0 7.0 40.0 47 29.106727662388213 35.0 22.0 38.0 7.0 40.0 48 28.760388578074366 34.0 22.0 38.0 7.0 40.0 49 28.564090058572774 34.0 21.0 37.0 7.0 40.0 50 28.761429663429297 34.0 22.0 38.0 7.0 40.0 51 27.33176388934482 32.0 20.0 36.0 7.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 5.0 9 18.0 10 31.0 11 30.0 12 41.0 13 69.0 14 111.0 15 209.0 16 442.0 17 879.0 18 1573.0 19 2517.0 20 3793.0 21 5444.0 22 7736.0 23 10413.0 24 13928.0 25 18427.0 26 22310.0 27 23179.0 28 21792.0 29 22317.0 30 24606.0 31 28749.0 32 33606.0 33 38723.0 34 43348.0 35 45917.0 36 34686.0 37 17860.0 38 3660.0 39 58.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 21.4726199241227 2.587941230262757 37.288441607773436 38.6509972378411 2 40.25741069879337 9.391105754575852 35.43371522094926 14.917768325681513 3 13.54278532538607 9.4405807568034 62.0812796908633 14.93535422694723 4 12.32771678726687 3.1408419660568656 67.09162020080754 17.43982104586872 5 17.20135622470561 3.7441556188126937 61.95583359516787 17.09865456131383 6 14.593015348974625 9.192971266982118 63.84010429611844 12.373909087924817 7 54.83096431703394 1.4608021984721369 40.573722442892716 3.134511041601208 8 56.05142586487462 6.302552534949048 33.556713359188514 4.089308240987812 9 51.606647939635806 3.1560830804871527 34.41889147857568 10.818377501301358 10 25.964997022120716 18.522409127786194 41.751274391645055 13.761319458448032 11 21.25643057789616 18.657703328190433 46.040827428378485 14.045038665534918 12 16.893954670580897 16.676123973569563 50.328035678276485 16.10188567757305 13 16.851982986226723 17.283658242629162 53.16663462124658 12.697724149897532 14 15.22141822086954 18.682323589962436 49.55191123574956 16.544346953418465 15 13.130337321034144 17.765511937309782 53.21868888899311 15.885461852662974 16 14.657965944316 17.205576841009385 48.20928629378303 19.927170920891584 17 15.472075933576878 17.995770004548888 49.86939537326662 16.662758688607617 18 15.634569661272094 16.570374087291725 50.151707708252246 17.64334854318394 19 15.661300231195982 19.371221962211415 46.94825993368943 18.019217872903173 20 17.077317001111428 19.057723962314586 50.250188755340254 13.614770281233731 21 17.57019119391856 20.761680555620686 47.324129263408665 14.343998987052087 22 15.970812093472583 17.387297820755116 48.90897068547498 17.73291940029732 23 15.653327955955524 20.846092881696123 47.46434751616731 16.036231646181047 24 15.701396086081814 18.916567794821773 47.679364468976125 17.702671650120287 25 14.409653018444093 21.304733186705995 45.95313240073345 18.332481394116463 26 14.845314412466761 19.003090429049095 48.382800519604764 17.768794638879378 27 15.552267643348545 19.895516298613295 46.77849736680438 17.773718691233782 28 14.211987488217446 19.688237142361388 48.2812712496307 17.81850411979047 29 16.082658425522535 18.20961456393999 46.36347009693349 19.344256913603985 30 15.754857225929591 20.977869901847225 46.60216939678014 16.665103475443047 31 17.205811319692927 19.262189374363977 45.05038946909337 18.48160983684973 32 16.677999803037906 20.631075928887306 44.14905340955454 18.54187085852025 33 15.96002607402961 19.52128831967886 42.971501460802195 21.547184145489336 34 16.995952897922052 21.154432350555012 41.93182297797307 19.91779177354987 35 14.988111930744378 24.269716140105704 40.265382974033834 20.476788955116092 36 18.86029291077148 22.22365514751054 38.31123762538748 20.604814316330504 37 16.852920900960893 24.820506567747927 38.68781039115734 19.63876214013384 38 19.259844587528548 23.76722832127331 36.77985734316893 20.193069748029206 39 18.073382448801578 22.592021159356403 38.86812449880181 20.466471893040204 40 18.099409582674838 23.055819995404217 39.44048696532998 19.404283456590964 41 17.60911465538668 23.623961845628614 39.753281529176185 19.013641969808525 42 17.73784345265172 23.29592616735213 39.74741956208761 19.218810817908544 43 18.696626789658552 22.280164510244376 37.804060232884225 21.219148467212847 44 18.996056068542806 23.757614695248055 36.212887886362246 21.033441349846886 45 18.660282593709407 22.579828267812175 36.76414727137156 21.99574186710686 46 19.264299682515862 23.51352238567992 36.58359868504355 20.638579246760678 47 16.377163652052392 22.812196643203166 40.38262231580527 20.42801738893917 48 18.09612688110524 23.421137784364024 37.11281707379982 21.369918260730916 49 17.63045221558908 21.856696007765933 39.41422535277318 21.098626423871806 50 17.83163492606887 21.272140649693537 38.06808323055351 22.828141193684083 51 17.853206964954815 21.716946712374376 36.811043008080134 23.618803314590668 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 60.0 1 315.0 2 570.0 3 15909.0 4 31248.0 5 21910.5 6 12573.0 7 11890.0 8 11207.0 9 11037.0 10 10867.0 11 10616.0 12 10365.0 13 9763.5 14 9162.0 15 8739.5 16 8317.0 17 7663.5 18 7010.0 19 6563.0 20 6116.0 21 5884.0 22 5652.0 23 5492.5 24 5333.0 25 5150.5 26 5112.0 27 5256.0 28 5524.0 29 5792.0 30 6192.0 31 6592.0 32 7067.0 33 7542.0 34 8602.5 35 9663.0 36 10505.5 37 11348.0 38 12241.5 39 13135.0 40 14038.5 41 14942.0 42 16263.0 43 17584.0 44 18608.0 45 19632.0 46 29759.0 47 39886.0 48 35457.5 49 31029.0 50 29194.5 51 27360.0 52 23540.0 53 19720.0 54 18045.0 55 16370.0 56 14964.5 57 13559.0 58 12361.5 59 11164.0 60 9882.0 61 8600.0 62 7795.5 63 6991.0 64 6057.5 65 5124.0 66 4408.5 67 3693.0 68 3215.0 69 2737.0 70 2335.5 71 1934.0 72 1632.0 73 1330.0 74 1105.0 75 755.0 76 630.0 77 474.5 78 319.0 79 215.0 80 111.0 81 88.0 82 65.0 83 41.5 84 18.0 85 15.0 86 12.0 87 9.5 88 7.0 89 5.0 90 3.0 91 2.5 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 426478.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.04102966204126 #Duplication Level Percentage of deduplicated Percentage of total 1 81.059389994157 43.80532899061209 2 7.894715107681857 8.532770666152011 3 3.670899813925937 5.951376171922599 4 2.172879640111113 4.696986123331608 5 1.4547740833369156 3.930874469458957 6 1.0135034307448056 3.2862461378076366 7 0.7366721238756151 2.7867364068292733 8 0.509281205735401 2.201766459637356 9 0.3468155282456886 1.686804142426359 >10 1.0667869603626268 8.52752344096851 >50 0.04112045475929748 1.5244713058061587 >100 0.026971481078482948 2.6494259935241877 >500 0.002652932565096683 0.9964020917204062 >1k 0.002652932565096683 3.0195523340697297 >5k 4.4215542751611383E-4 1.4465751230876112 >10k+ 4.4215542751611383E-4 4.957160142645455 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 20746 4.86449476878057 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCAGCCTTTTCGTATGCCG 6054 1.4195339501685902 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCAGCCTTTTCGTATGC 3487 0.8176271695140194 No Hit GAATCTGTCTCTTATACACATCTGACGCCAGCCTTTTCGTATGCCGTCTTC 3278 0.7686211246535578 No Hit GCTGTCTCTTATACACATCTGACGCCAGCCTTTTCGTATGCCGTCTTCTGC 1814 0.4253443319467827 TruSeq Adapter, Index 23 (95% over 22bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCAGCCTTTT 1391 0.32615984880814486 No Hit GAACTGTCTCTTATACACATCTGACGCCAGCCTTTTCGTATGCCGTCTTCT 1351 0.3167807014664297 TruSeq Adapter, Index 20 (95% over 22bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCAGCCTTTTCGTATGCC 1316 0.3085739475424289 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCAGCCTTTTCGTATGCCGTC 909 0.21314112334047713 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCAGCCTTTTCGTA 811 0.19016221235327496 No Hit CTGTCTCTTATACACATCTGACGCCAGCCTTTTCGTATGCCGTCTTCTGCT 712 0.16694882268252992 TruSeq Adapter, Index 20 (96% over 25bp) GAATGACTGTCTCTTATACACATCTGACGCCAGCCTTTTCGTATGCCGTCT 651 0.1526456229864143 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCCAGCCTTTTCGTATGC 555 0.13013566936629792 No Hit GAATGATACCTGTCTCTTCTACACATCTGACGCCAGCCTTTTCGTATGCCG 532 0.12474265964481168 No Hit TCTGTCTCTTATACACATCTGACGCCAGCCTTTTCGTATGCCGTCTTCTGC 481 0.11278424678412485 TruSeq Adapter, Index 23 (95% over 22bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.2077481136189909 0.0 2 0.0 0.0 0.0 0.983403598778835 0.0 3 0.0 0.0 0.0 1.2031101252585128 0.0 4 0.0 0.0 0.0 1.9480489028742396 0.0 5 0.0 0.0 0.0 3.264881189651049 0.0 6 0.0 0.0 0.0 3.660212250104343 0.0 7 0.0 0.0 0.0 4.138548764531817 0.0 8 0.0 0.0 0.0 4.742565853338273 0.0 9 0.0 0.0 0.0 4.982672025286181 0.0 10 0.0 0.0 0.0 7.05687045990649 0.0 11 0.0 0.0 0.0 7.918345143243028 0.0 12 0.0 0.0 0.0 9.47317329381586 0.0 13 0.0 0.0 0.0 9.754782192750858 0.0 14 0.0 0.0 0.0 9.927124025154873 0.0 15 0.0 0.0 0.0 10.395612434873545 0.0 16 0.0 0.0 0.0 10.732089345757577 0.0 17 0.0 0.0 0.0 11.103972537856583 0.0 18 0.0 0.0 0.0 11.452407861601301 0.0 19 0.0 0.0 0.0 12.11762388681245 0.0 20 0.0 0.0 0.0 12.424790962253622 0.0 21 0.0 0.0 0.0 12.756109342099709 0.0 22 0.0 0.0 0.0 13.178639929843978 0.0 23 0.0 0.0 0.0 13.510427267057151 0.0 24 0.0 0.0 0.0 13.773981307359348 0.0 25 0.0 0.0 0.0 13.99814292882634 0.0 26 0.0 0.0 0.0 14.201201468774475 0.0 27 0.0 0.0 0.0 14.441542119405925 0.0 28 0.0 0.0 0.0 14.644131701986973 0.0 29 0.0 0.0 0.0 14.894085978643682 0.0 30 0.0 0.0 0.0 15.142398904515591 0.0 31 0.0 0.0 0.0 15.37851893884327 0.0 32 2.344786835428791E-4 0.0 0.0 15.622142291044321 0.0 33 2.344786835428791E-4 0.0 0.0 15.862951899042859 0.0 34 2.344786835428791E-4 0.0 0.0 16.095085795750308 0.0 35 2.344786835428791E-4 0.0 0.0 16.345040072407016 0.0 36 2.344786835428791E-4 0.0 0.0 16.580222192000527 0.0 37 2.344786835428791E-4 0.0 0.0 16.810714737923174 0.0 38 2.344786835428791E-4 0.0 0.0 17.052462260655883 0.0 39 2.344786835428791E-4 0.0 0.0 17.337822818527567 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTCACGG 35 1.2095188E-7 45.0 2 CGTTTTT 12100 0.0 44.442146 1 ACCGGTG 110 0.0 40.909092 17 TACGGCT 605 0.0 40.53719 7 ACGGCTG 605 0.0 40.53719 8 CGATGAA 135 0.0 40.000004 19 GAATGAT 2605 0.0 39.990402 1 AATGATA 2425 0.0 39.896904 2 GTTTTTT 13685 0.0 39.837414 2 ATGATAC 2500 0.0 39.600002 3 CGGGAAC 115 0.0 39.130436 6 ATACGGC 1715 0.0 39.09621 6 TGATACC 830 0.0 39.036144 4 ACGGCGA 1060 0.0 38.84434 8 TGATACG 1750 0.0 38.82857 4 GATACCT 835 0.0 38.802395 5 CACCGGT 145 0.0 38.793102 16 CGACCAC 680 0.0 38.713234 12 GATACGG 1750 0.0 38.699997 5 TACGGCG 1135 0.0 38.25991 7 >>END_MODULE