##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933384.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 924934 Sequences flagged as poor quality 0 Sequence length 51 %GC 33 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.543320928844654 31.0 28.0 33.0 25.0 34.0 2 28.846526346744742 31.0 28.0 33.0 16.0 34.0 3 28.811939014026947 31.0 28.0 34.0 16.0 34.0 4 33.25383973342963 35.0 32.0 37.0 28.0 37.0 5 34.329783530500556 35.0 33.0 37.0 30.0 37.0 6 33.836950528362024 35.0 33.0 37.0 28.0 37.0 7 33.82566431767023 35.0 33.0 37.0 29.0 37.0 8 33.64109979739095 35.0 33.0 37.0 28.0 37.0 9 34.916237266659024 37.0 34.0 39.0 28.0 39.0 10 34.96460504208949 37.0 34.0 39.0 28.0 39.0 11 35.33227343788854 37.0 34.0 39.0 30.0 39.0 12 35.45443891131691 37.0 34.0 39.0 30.0 39.0 13 35.656473867324586 37.0 35.0 39.0 30.0 39.0 14 36.41588913371116 38.0 35.0 40.0 30.0 41.0 15 36.707184512624686 39.0 35.0 41.0 30.0 41.0 16 36.63964563958077 38.0 34.0 41.0 31.0 41.0 17 35.855418873130404 38.0 34.0 40.0 27.0 41.0 18 35.55189775702915 38.0 34.0 39.0 28.0 40.0 19 34.81028916657837 37.0 34.0 38.0 27.0 40.0 20 33.998985873586655 35.0 33.0 38.0 27.0 40.0 21 34.35298302365358 35.0 33.0 38.0 29.0 40.0 22 34.74247459818755 35.0 33.0 39.0 29.0 40.0 23 35.072170554872024 35.0 33.0 39.0 30.0 40.0 24 34.48219008058953 35.0 33.0 38.0 27.0 40.0 25 33.51762828482897 35.0 33.0 38.0 24.0 40.0 26 33.448147651616225 35.0 32.0 38.0 24.0 40.0 27 34.27070580171126 35.0 33.0 38.0 26.0 40.0 28 34.058522013462586 35.0 33.0 39.0 25.0 40.0 29 33.95675367107275 35.0 33.0 39.0 24.0 40.0 30 33.19653834760102 35.0 33.0 39.0 21.0 40.0 31 33.06582523726017 35.0 33.0 38.0 21.0 40.0 32 32.28484951358691 35.0 31.0 38.0 16.0 40.0 33 31.45877003115898 35.0 30.0 39.0 12.0 40.0 34 30.753005079281333 35.0 25.0 39.0 8.0 40.0 35 30.11913606808702 35.0 23.0 39.0 7.0 41.0 36 29.491555073118732 35.0 21.0 39.0 7.0 40.0 37 29.250667615202815 35.0 18.0 39.0 7.0 40.0 38 29.0980448334692 35.0 18.0 39.0 7.0 40.0 39 28.68151781640636 35.0 18.0 39.0 7.0 40.0 40 28.504837101890512 35.0 18.0 39.0 7.0 40.0 41 28.166155639213176 34.0 17.0 39.0 7.0 40.0 42 28.18380446604839 35.0 15.0 39.0 7.0 40.0 43 28.104033368867402 35.0 15.0 39.0 7.0 40.0 44 28.12049184049889 35.0 15.0 39.0 7.0 40.0 45 28.24753982446315 35.0 16.0 39.0 7.0 40.0 46 28.01756665881025 35.0 15.0 39.0 7.0 40.0 47 27.926982898239224 34.0 15.0 39.0 7.0 40.0 48 27.77986861765272 34.0 15.0 38.0 7.0 40.0 49 27.946206972605612 34.0 15.0 39.0 7.0 40.0 50 27.92894844388897 34.0 15.0 39.0 7.0 40.0 51 26.941148233279346 33.0 15.0 38.0 7.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 17.0 9 49.0 10 51.0 11 63.0 12 78.0 13 109.0 14 158.0 15 251.0 16 502.0 17 1092.0 18 2193.0 19 3882.0 20 6300.0 21 9245.0 22 13309.0 23 19062.0 24 28286.0 25 40944.0 26 53022.0 27 56441.0 28 51293.0 29 44126.0 30 41664.0 31 43295.0 32 47601.0 33 55018.0 34 63988.0 35 77119.0 36 86754.0 37 92901.0 38 74216.0 39 11904.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.16204831912331 2.0469568639492115 29.551297714215284 44.23969710271219 2 42.632771635597784 15.226491836174258 30.206263365818536 11.934473162409425 3 10.541076444373328 15.349203294505337 61.97090819453064 12.138812066590697 4 9.508894688702114 2.4942320208793274 74.33254697091901 13.664326319499553 5 19.098984359965144 2.9096130102255944 62.64760512641983 15.34379750338943 6 12.151677849446555 13.050660912021831 65.40823453349104 9.389426705040576 7 47.35851422912338 0.9743397907310143 49.47023247064115 2.196913509504462 8 46.531211956745025 9.816916666486474 40.678902494664484 2.9729688821040203 9 43.77025820220686 2.7153288775199096 39.92436217070623 13.590050749566995 10 26.299065663063526 18.608679105752408 44.95780239454923 10.13445283663483 11 19.38873476377774 14.647423491838337 53.56652474663057 12.397316997753354 12 14.378647557555457 13.31122004380853 55.68721660140075 16.62291579723526 13 14.896630462281632 13.84174438392361 60.67049108368814 10.591134070106625 14 13.20483407464749 19.47328133683052 53.01264738889478 14.309237199627217 15 9.94687188491287 14.921388985592484 61.66407549079177 13.46766363870287 16 11.96723225657182 16.166667027052743 52.80636239991178 19.059738316463662 17 12.475700968934 16.62399695545844 56.88762657659898 14.012675499008578 18 12.198600116332624 15.352663000819518 55.60483234479433 16.843904538053525 19 12.115783396436935 17.088786875604097 53.58187719339974 17.213552534559224 20 14.25334131948874 16.882177539154146 57.60908345892788 11.255397682429233 21 14.617042945766942 20.205333569746596 53.52035929050073 11.657264193985734 22 12.8382133211667 13.513180399898802 56.36142686937663 17.287179409557872 23 13.264189661100142 19.640320282312036 54.94143365905026 12.154056397537554 24 14.322859793239301 15.966004060830286 53.156008969288614 16.555127176641793 25 11.677806200226179 23.015804370906466 51.351555894798985 13.954833534068376 26 13.07282465559705 15.254493834154653 54.90997195475569 16.76270955549261 27 15.232870669691026 17.15571056961902 52.09020319287646 15.521215567813487 28 12.030696244272564 17.21841774656354 55.828848328637505 14.922037680526396 29 17.058838792821973 14.70104893970813 52.970049754901424 15.270062512568463 30 13.279217760402364 18.30508987668309 56.362291795955166 12.053400566959374 31 18.155457578594795 16.566046874695925 49.03787729719093 16.24061824951834 32 16.370789699589373 22.778706372562798 48.30831172818817 12.542192199659652 33 14.61585367172144 18.000527605212913 48.10126992844895 19.282348794616695 34 19.607993651438914 21.042366266133584 43.202325787569706 16.147314294857797 35 14.783757543781503 24.5817539413623 44.269537069672 16.364951445184197 36 23.24479368257627 21.062583924907074 39.813219105363196 15.879403287153462 37 15.78858599640623 25.217799324059882 43.81134221468775 15.182272464846141 38 20.009860162995412 23.375397595936576 40.31195739371674 16.30278484735127 39 19.01411343944541 25.26558651752449 38.0442280205939 17.676072022436195 40 16.709516570912086 25.595556007239434 42.65180002032577 15.043127401522705 41 19.841740059290718 25.07368093290981 36.66953533981884 18.415043667980633 42 16.5790207733741 26.645360641948507 40.7034447863307 16.072173798346693 43 22.011948960682602 22.45727803281099 37.43650898334367 18.094264023162733 44 18.714416379979546 23.561356810323765 38.31581496625705 19.40841184343964 45 17.486761217557145 22.864225988016443 38.267919656970115 21.381093137456293 46 21.5904053694642 24.87604520971226 36.76846131723993 16.765088103583604 47 15.56381320180683 21.945025266667674 45.420862461537794 17.070299069987698 48 18.118698199006634 23.784183520121434 37.10578268287251 20.991335597999424 49 16.175640640305147 22.772651886512985 42.484220495732664 18.567486977449203 50 18.685657571242924 20.90105888636378 40.6014915658847 19.811791976508594 51 17.427838094393763 21.203891304676876 38.720600605016145 22.647669995913223 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 98.0 1 1735.5 2 3373.0 3 39483.0 4 75593.0 5 57243.0 6 38893.0 7 37266.0 8 35639.0 9 34297.0 10 32955.0 11 31184.0 12 29413.0 13 27574.5 14 25736.0 15 23582.0 16 21428.0 17 19635.0 18 17842.0 19 16236.0 20 14630.0 21 13368.5 22 12107.0 23 11638.0 24 11169.0 25 11567.0 26 12019.5 27 12074.0 28 12929.0 29 13784.0 30 15162.0 31 16540.0 32 17632.0 33 18724.0 34 20610.0 35 22496.0 36 23810.0 37 25124.0 38 26277.0 39 27430.0 40 28068.0 41 28706.0 42 30201.0 43 31696.0 44 33683.5 45 35671.0 46 80284.0 47 124897.0 48 87866.5 49 50836.0 50 45768.5 51 40701.0 52 35359.5 53 30018.0 54 27632.5 55 25247.0 56 23637.0 57 22027.0 58 20279.0 59 18531.0 60 16787.5 61 15044.0 62 13119.0 63 11194.0 64 9612.0 65 8030.0 66 6721.5 67 5413.0 68 4391.5 69 3370.0 70 2872.0 71 2374.0 72 2028.5 73 1683.0 74 1414.5 75 905.5 76 665.0 77 488.5 78 312.0 79 264.5 80 217.0 81 152.0 82 87.0 83 61.5 84 36.0 85 22.0 86 8.0 87 7.0 88 6.0 89 6.0 90 6.0 91 3.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 924934.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.72673471978072 #Duplication Level Percentage of deduplicated Percentage of total 1 83.7146341472747 38.279968678159264 2 5.354131299212353 4.896538831479163 3 2.381761472390706 3.2673052504141245 4 1.5619508810995824 2.8569165434147346 5 1.2561086699423676 2.871887396483562 6 1.0263614586068603 2.8159294886593864 7 0.8532741687933214 2.731220909175752 8 0.6822580252322243 2.4957945384188305 9 0.573782624853592 2.3613485286149696 >10 2.487679160862716 16.817310990232254 >50 0.05640945829784128 1.7936183539700465 >100 0.04522230577262869 3.836875360200023 >500 0.002380121355965635 0.6925182366285327 >1k 0.002856145627158762 3.2118349333874945 >5k 2.3801213559656348E-4 0.6486576599569472 >10k+ 9.520485423862539E-4 10.422274300804895 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 32949 3.5623082295601636 No Hit GAATCTGTCTCTTATACACATCTGACGCGTGATCAGTCGTATGCCGTCTTC 21897 2.3674121613001575 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGTGATCAGTCGTATGCCG 20761 2.2445925871467582 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGTGATCAGTCGTATGC 20155 2.1790743988219696 No Hit GAACTGTCTCTTATACACATCTGACGCGTGATCAGTCGTATGCCGTCTTCT 5960 0.6443703010160725 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGTGATCAGTCGTATGCCGTC 4841 0.5233886958420817 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGTGATCAGT 4717 0.5099823338746332 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGTGATCAGTCGTA 4091 0.4423018291034819 No Hit GCTGTCTCTTATACACATCTGACGCGTGATCAGTCGTATGCCGTCTTCTGC 3957 0.4278143089128521 No Hit GAATGACTGTCTCTTATACACATCTGACGCGTGATCAGTCGTATGCCGTCT 3516 0.3801352312705555 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCGTGATCAGTCGT 1675 0.1810940023828727 No Hit GAATGCTGTCTCTTATACACATCTGACGCGTGATCAGTCGTATGCCGTCTT 1455 0.15730852147288346 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 1141 0.12336015326498972 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1049 0.11341349761172148 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA 1037 0.1121161077439039 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCGTGATCAGTCGTAT 1021 0.11038625458681375 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCGTGATCAGTCGTATG 1011 0.10930509636363243 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0675723889488331 0.0 2 0.0 0.0 0.0 0.5602561912525651 0.0 3 0.0 0.0 0.0 0.639072625722484 0.0 4 0.0 0.0 0.0 1.4047488793795018 0.0 5 0.0 0.0 0.0 4.153485545995714 0.0 6 0.0 0.0 0.0 4.39058354433938 0.0 7 0.0 0.0 0.0 4.874293733390707 0.0 8 0.0 0.0 0.0 5.53715184002318 0.0 9 0.0 0.0 0.0 5.621482181431324 0.0 10 0.0 0.0 0.0 8.30048414265234 0.0 11 0.0 0.0 0.0 8.460495559683178 0.0 12 0.0 0.0 0.0 11.128037243738472 0.0 13 0.0 0.0 0.0 11.332268032097426 0.0 14 0.0 0.0 0.0 11.489792785214945 0.0 15 0.0 0.0 0.0 12.068861129550866 0.0 16 0.0 0.0 0.0 12.342069812548788 0.0 17 0.0 0.0 0.0 12.468673440483322 0.0 18 0.0 0.0 0.0 12.575059409644364 0.0 19 0.0 0.0 0.0 13.28754267872086 0.0 20 0.0 0.0 0.0 13.439445409077837 0.0 21 0.0 0.0 0.0 13.54864238961915 0.0 22 0.0 0.0 0.0 13.79309226388045 0.0 23 0.0 0.0 0.0 13.911587205141124 0.0 24 0.0 0.0 0.0 14.02067606986012 0.0 25 0.0 0.0 0.0 14.10868234922708 0.0 26 0.0 0.0 0.0 14.222528310128075 0.0 27 0.0 0.0 0.0 14.373782345551142 0.0 28 0.0 0.0 0.0 14.460058771761013 0.0 29 0.0 0.0 0.0 14.563201266252511 0.0 30 0.0 0.0 0.0 14.68839938849691 0.0 31 0.0 0.0 0.0 14.796947674104315 0.0 32 0.0 0.0 0.0 14.92171333305944 0.0 33 0.0 0.0 0.0 15.035559293960434 0.0 34 0.0 0.0 0.0 15.200544038817904 0.0 35 0.0 0.0 0.0 15.34152707112075 0.0 36 0.0 0.0 0.0 15.47526634332828 0.0 37 0.0 1.0811582231813297E-4 0.0 15.620357776879215 0.0 38 0.0 1.0811582231813297E-4 0.0 15.765881673719422 0.0 39 0.0 1.0811582231813297E-4 0.0 15.930109607820667 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGACG 40 6.8121153E-9 45.0 6 CGCCGAT 25 3.890213E-5 45.0 16 CGTTTTT 29835 0.0 44.411766 1 TGATACC 2445 0.0 42.23926 4 GATACCT 2435 0.0 42.04312 5 ACGGCTG 2400 0.0 41.90625 8 TACGGCT 2400 0.0 41.8125 7 CCGATGA 680 0.0 41.360294 18 CGGCTGT 2480 0.0 41.28024 9 GCGACTG 515 0.0 41.06796 11 CACCGGT 215 0.0 40.813953 16 GAATCTG 2775 0.0 40.540543 1 ATACCTG 2545 0.0 40.225933 6 AATCTGT 2810 0.0 40.035587 2 ATGATAC 8495 0.0 40.020603 3 GAATGAT 8890 0.0 39.912823 1 CCGGTGA 130 0.0 39.80769 18 AATGATA 8340 0.0 39.76619 2 CGCTTTT 855 0.0 39.736843 1 GGCGACT 555 0.0 39.72973 10 >>END_MODULE