##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933383.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 553233 Sequences flagged as poor quality 0 Sequence length 51 %GC 33 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.674811517028086 31.0 28.0 31.0 16.0 33.0 2 28.852143671834472 31.0 30.0 33.0 16.0 34.0 3 28.983894670057644 31.0 30.0 33.0 16.0 34.0 4 32.22762741918866 35.0 32.0 37.0 19.0 37.0 5 33.80639441248082 35.0 33.0 37.0 30.0 37.0 6 32.880227679838335 35.0 33.0 37.0 18.0 37.0 7 32.55267129762686 35.0 32.0 36.0 26.0 37.0 8 33.00737121610605 35.0 32.0 37.0 27.0 37.0 9 33.33699363559296 35.0 32.0 38.0 25.0 39.0 10 32.36021170103736 35.0 28.0 39.0 15.0 39.0 11 33.278170318834924 37.0 31.0 39.0 17.0 39.0 12 33.95824544089019 37.0 31.0 39.0 26.0 39.0 13 34.17373150191691 37.0 32.0 39.0 27.0 39.0 14 34.277778079037226 37.0 32.0 40.0 23.0 41.0 15 34.801112731886924 37.0 32.0 40.0 26.0 41.0 16 34.963783794531416 37.0 32.0 40.0 27.0 41.0 17 33.00665723122084 36.0 30.0 40.0 19.0 41.0 18 33.53232905484669 36.0 31.0 39.0 24.0 39.0 19 33.251687806041936 37.0 32.0 37.0 24.0 39.0 20 32.634633147335755 35.0 31.0 36.0 25.0 39.0 21 32.97221062373358 35.0 32.0 37.0 25.0 39.0 22 32.91491288480622 35.0 31.0 37.0 25.0 39.0 23 33.96269203030188 35.0 33.0 38.0 27.0 40.0 24 32.28287900396397 35.0 31.0 37.0 21.0 39.0 25 31.477354026242107 35.0 30.0 37.0 18.0 39.0 26 30.351672803321566 33.0 25.0 37.0 18.0 39.0 27 32.379368186641074 34.0 30.0 37.0 22.0 39.0 28 32.493741335025206 35.0 31.0 37.0 21.0 39.0 29 32.45143547113061 35.0 31.0 38.0 21.0 40.0 30 31.557528202402967 35.0 30.0 37.0 18.0 40.0 31 31.889037711054836 35.0 30.0 37.0 20.0 40.0 32 31.654669913038447 35.0 30.0 37.0 18.0 40.0 33 31.281051564169164 35.0 30.0 38.0 15.0 40.0 34 30.157685821344714 35.0 25.0 38.0 9.0 40.0 35 29.51056968763613 35.0 23.0 38.0 7.0 40.0 36 28.873566833504146 34.0 21.0 38.0 7.0 40.0 37 28.75271359445297 35.0 21.0 38.0 7.0 40.0 38 28.804778456816567 35.0 21.0 38.0 7.0 40.0 39 28.34670021491849 34.0 20.0 38.0 7.0 40.0 40 28.101281015413036 33.0 18.0 38.0 7.0 40.0 41 27.751929114857575 33.0 18.0 37.0 7.0 40.0 42 27.962164223753824 33.0 18.0 38.0 7.0 40.0 43 28.026243915312357 34.0 18.0 38.0 7.0 40.0 44 27.942454625808654 34.0 18.0 38.0 7.0 40.0 45 28.164849168433552 34.0 18.0 38.0 7.0 40.0 46 27.880426511072187 34.0 18.0 38.0 7.0 40.0 47 27.89294926369179 34.0 18.0 38.0 7.0 40.0 48 27.674005346752633 33.0 18.0 37.0 7.0 40.0 49 27.418521671700713 33.0 18.0 37.0 7.0 40.0 50 27.63549715942469 33.0 18.0 37.0 7.0 40.0 51 26.23882523276811 31.0 15.0 36.0 7.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 5.0 9 8.0 10 25.0 11 29.0 12 32.0 13 63.0 14 98.0 15 250.0 16 573.0 17 1045.0 18 1876.0 19 3157.0 20 4793.0 21 7048.0 22 9807.0 23 13621.0 24 18982.0 25 25785.0 26 32534.0 27 34303.0 28 32110.0 29 30802.0 30 32317.0 31 36521.0 32 40992.0 33 46835.0 34 52619.0 35 57606.0 36 41630.0 37 22599.0 38 5071.0 39 96.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 21.320673206406703 1.9951810539139927 31.35568557913212 45.32846016054719 2 45.52530308206488 11.987354333526742 30.861138073831462 11.626204510576917 3 10.586317157508681 11.869863149884406 65.87387231058162 11.669947382025295 4 9.83220451419203 2.4317059900620537 74.10729294890218 13.628796546843736 5 17.339168126268678 2.7905059893390307 65.23634707257159 14.633978811820697 6 12.283432116305427 10.301626981759945 67.14259633825169 10.272344563682932 7 46.84771154287615 0.9637892172014323 49.84229068041856 2.3462085595038618 8 47.60905441287848 7.833950613936623 41.28116001756945 3.275834955615446 9 44.07365431924705 2.5564274003900707 41.246635685145314 12.123282595217566 10 24.835647909651087 18.87215693930044 45.91139718708031 10.380797963968165 11 17.960786865570203 14.86552682142967 55.200973188511895 11.972713124488235 12 14.189139114984103 13.55269841097693 56.75764099393926 15.500521480099705 13 14.260718359172357 14.061525613981813 61.05799907091587 10.619756955929962 14 12.876672215865648 17.211373869599246 55.10173832725091 14.810215587284201 15 9.753756554652378 14.99765921411051 61.70257377994444 13.546010451292675 16 11.702483402110865 14.874203093452486 54.413420746773966 19.009892757662687 17 12.201549799090076 15.609697903053505 57.86766154585862 14.321090751997803 18 11.965121386468269 14.226736293749651 56.97725912951685 16.830883190265222 19 12.103941738833367 16.365798858708718 54.948819032848725 16.581440369609187 20 13.85456037510416 16.220290546659363 58.509344164212905 11.415804914023568 21 14.592405008378027 18.790816889086514 54.383957573029804 12.232820529505652 22 12.737851863500552 13.874624254156927 56.93911968374989 16.448404198592637 23 12.800754835665984 19.090690540875183 55.17548663944486 12.933067984013968 24 13.317354532357975 15.423338810230048 54.844523012907764 16.41478364450421 25 11.588788087478513 20.190046508433156 53.03443576214724 15.186729641941099 26 12.779606422610366 15.619277953412034 55.68521762078545 15.915898003192144 27 13.504075136515716 16.919272711497687 54.05841661650697 15.518235535479628 28 11.844195845150235 16.60801145267907 57.113910413876255 14.433882288294445 29 15.563243696597997 14.51088420249696 54.65310276140433 15.272769339500716 30 12.923487933655439 17.209024045926398 57.37853671057221 12.488951309845941 31 16.33073225928316 16.456176692279744 51.49277067709266 15.720320371344442 32 15.054235737925973 21.25523965490128 51.04811173592319 12.642412871249546 33 13.633496194189428 17.446898503885343 50.474212492747185 18.44539280917805 34 18.294281071447294 20.37965920326517 45.62688776699871 15.69917195828882 35 13.948011055016602 23.13383330350865 46.28863426440578 16.629521377068976 36 21.219630788474294 20.12967411560771 42.7268438433716 15.923851252546395 37 15.485338004059773 24.02532025385326 45.51084262869352 14.978499113393454 38 18.777802481052287 22.499200156172897 43.3887710964458 15.334226266329015 39 17.539083894127792 23.95663310033928 41.28748646591942 17.216796539613508 40 16.05977951423722 24.02730856619182 44.764863990398254 15.1480479291727 41 18.941928626817273 23.267050230192343 39.98984153150661 17.801179611483768 42 16.376282687402956 24.831129017972536 42.83746631166254 15.95512198296197 43 20.913249932668514 21.25939703524555 40.559221883004085 17.268131149081853 44 17.870770543333457 22.189204187024274 41.479629740091426 18.46039552955084 45 17.123345859701068 21.696644994062176 40.953449993040905 20.22655915319585 46 19.685195930105397 23.739907055435953 39.805832262356006 16.76906475210264 47 15.192513823289644 20.93132549938272 47.138908922641996 16.73725175468564 48 17.317838957545916 22.4502153703774 40.18523840768718 20.046707264389507 49 15.678385056567487 21.586745548439808 44.10619033933261 18.628679055660093 50 18.000553112341457 19.83919975851043 42.51554046848254 19.644706660665577 51 16.753519764728424 20.03098152134815 41.31911870766928 21.896380006254144 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 107.0 1 555.5 2 1004.0 3 32463.5 4 63923.0 5 43507.5 6 23092.0 7 21842.5 8 20593.0 9 19813.0 10 19033.0 11 17875.5 12 16718.0 13 15481.5 14 14245.0 15 13052.0 16 11859.0 17 10863.5 18 9868.0 19 8915.0 20 7962.0 21 7299.5 22 6637.0 23 6323.0 24 6009.0 25 6182.0 26 6467.0 27 6579.0 28 7129.5 29 7680.0 30 8358.5 31 9037.0 32 9927.0 33 10817.0 34 11792.0 35 12767.0 36 13710.0 37 14653.0 38 15401.5 39 16150.0 40 16590.5 41 17031.0 42 18344.5 43 19658.0 44 20808.5 45 21959.0 46 39677.0 47 57395.0 48 46758.0 49 36121.0 50 32580.5 51 29040.0 52 24662.0 53 20284.0 54 17827.5 55 15371.0 56 14020.0 57 12669.0 58 11624.0 59 10579.0 60 9416.5 61 8254.0 62 7195.0 63 6136.0 64 5364.0 65 4592.0 66 3861.0 67 3130.0 68 2560.5 69 1991.0 70 1708.5 71 1426.0 72 1200.5 73 975.0 74 829.5 75 550.0 76 416.0 77 315.0 78 214.0 79 172.0 80 130.0 81 90.5 82 51.0 83 37.0 84 23.0 85 14.5 86 6.0 87 5.5 88 5.0 89 4.0 90 3.0 91 1.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 553233.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.705777784987205 #Duplication Level Percentage of deduplicated Percentage of total 1 81.23860950738279 38.75551052720553 2 7.0083789968608095 6.686803421144266 3 3.27937185276291 4.693349546467475 4 2.212472083739948 4.221908063295421 5 1.5814767041518518 3.7722788110201098 6 1.1837710211087806 3.388363036879373 7 0.8593494951625152 2.869715523910472 8 0.6464971705607445 2.4673320285915077 9 0.45588140232513413 1.957335918806808 >10 1.4288144743230342 9.995584186279217 >50 0.05691912103448491 1.9534158373196893 >100 0.04115098613338023 3.863899457043122 >500 0.003845886554521517 1.2061384155081425 >1k 0.0019229432772607585 1.8493877743112377 >5k 0.001153765966356455 4.662732231780336 >10k+ 3.8458865545215175E-4 7.656245220437297 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 41730 7.542933989837916 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGTGATCAGTCGTATGCCG 9879 1.7856852356963522 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGTGATCAGTCGTATGC 8822 1.594626495527201 No Hit GAATCTGTCTCTTATACACATCTGACGCGTGATCAGTCGTATGCCGTCTTC 6713 1.213412793524609 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGTGATCAGT 2471 0.44664725350801565 No Hit GAACTGTCTCTTATACACATCTGACGCGTGATCAGTCGTATGCCGTCTTCT 2460 0.444658941169453 No Hit GCTGTCTCTTATACACATCTGACGCGTGATCAGTCGTATGCCGTCTTCTGC 2101 0.3797676566654556 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGTGATCAGTCGTATGCCGTC 1586 0.2866784880872978 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGTGATCAGTCGTA 1462 0.2642647853616831 No Hit GAATGACTGTCTCTTATACACATCTGACGCGTGATCAGTCGTATGCCGTCT 920 0.16629521377068973 No Hit GAATGATACCTGTCTCTTCTACACATCTGACGCGTGATCAGTCGTATGCCG 784 0.1417124430393704 No Hit GAATCTTTCTCTTATACACATCTGACGCGTGATCAGTCGTATGCCGTCTTC 774 0.13990488636794984 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 717 0.12960181334085277 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGTGATCAGTCGTATGCC 620 0.11206851362807353 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCGTGATCAGTCGT 604 0.10917642295380064 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA 603 0.1089956672866586 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.11315304763092585 0.0 2 0.0 0.0 0.0 0.6704227694298786 0.0 3 0.0 0.0 0.0 0.825872643172045 0.0 4 0.0 0.0 0.0 1.5461839767331305 0.0 5 0.0 0.0 0.0 3.1411719835946155 0.0 6 0.0 0.0 0.0 3.4283927386833395 0.0 7 0.0 0.0 0.0 3.7758051309303675 0.0 8 0.0 0.0 0.0 4.299092787306614 0.0 9 0.0 0.0 0.0 4.425983265640336 0.0 10 0.0 0.0 0.0 6.740740339061481 0.0 11 0.0 0.0 0.0 7.245048650387811 0.0 12 0.0 0.0 0.0 9.53992260042333 0.0 13 0.0 0.0 0.0 9.76875927502517 0.0 14 0.0 0.0 0.0 9.909748695395972 0.0 15 0.0 0.0 0.0 10.36362617558967 0.0 16 0.0 0.0 0.0 10.634036653634183 0.0 17 0.0 0.0 0.0 10.882214184620222 0.0 18 0.0 0.0 0.0 11.129668692937695 0.0 19 1.8075566714205408E-4 0.0 0.0 11.881973779582925 0.0 20 1.8075566714205408E-4 0.0 0.0 12.151661234958869 0.0 21 3.6151133428410817E-4 0.0 0.0 12.43345932003333 0.0 22 3.6151133428410817E-4 0.0 0.0 12.86727292117426 0.0 23 3.6151133428410817E-4 0.0 0.0 13.160458613278673 0.0 24 3.6151133428410817E-4 0.0 0.0 13.393994935226207 0.0 25 3.6151133428410817E-4 0.0 0.0 13.590114834075335 0.0 26 3.6151133428410817E-4 0.0 0.0 13.782077352580197 0.0 27 3.6151133428410817E-4 0.0 0.0 13.974762893753626 0.0 28 3.6151133428410817E-4 0.0 0.0 14.15190344755284 0.0 29 3.6151133428410817E-4 0.0 0.0 14.348746369070536 0.0 30 3.6151133428410817E-4 0.0 0.0 14.564930146972433 0.0 31 3.6151133428410817E-4 0.0 0.0 14.77063009618009 0.0 32 3.6151133428410817E-4 0.0 0.0 14.95716994467069 0.0 33 3.6151133428410817E-4 0.0 0.0 15.150397752845546 0.0 34 3.6151133428410817E-4 0.0 0.0 15.36730455341601 0.0 35 5.422670014261622E-4 0.0 0.0 15.599937097027835 0.0 36 5.422670014261622E-4 0.0 0.0 15.813771051256884 0.0 37 5.422670014261622E-4 0.0 0.0 16.025797448814515 0.0 38 5.422670014261622E-4 0.0 0.0 16.23908913604214 0.0 39 5.422670014261622E-4 0.0 0.0 16.459972561289728 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACACGAC 45 3.8380676E-10 45.0 26 ATTCGGC 35 1.2103919E-7 45.0 28 TTATACG 35 1.2103919E-7 45.0 26 CTACGGG 45 3.8380676E-10 45.0 3 TATACGG 30 2.1634532E-6 44.999996 27 CGTTTTT 20115 0.0 44.574947 1 ACCGGTG 135 0.0 43.333332 17 CGACCAC 865 0.0 42.658962 12 TGATACC 1430 0.0 42.482513 4 GCGACCA 870 0.0 42.413795 11 GATACCT 1450 0.0 42.051723 5 GAATGAT 4285 0.0 41.324387 1 GCGAGAC 60 3.6379788E-12 41.249996 21 ATGATAC 4075 0.0 41.190186 3 CCACCGG 175 0.0 41.14286 15 CACCGGT 170 0.0 41.02941 16 TACGGCT 1115 0.0 40.964123 7 CGACCAA 55 6.002665E-11 40.909092 29 ACCACCG 490 0.0 40.867348 14 AATGATA 4090 0.0 40.81907 2 >>END_MODULE