##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933381.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 294654 Sequences flagged as poor quality 0 Sequence length 51 %GC 34 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 27.902492414832313 31.0 25.0 31.0 16.0 33.0 2 27.678768996857332 31.0 26.0 33.0 16.0 34.0 3 27.777983668981246 31.0 25.0 33.0 16.0 34.0 4 31.548188723044657 35.0 28.0 37.0 19.0 37.0 5 33.60021245257149 35.0 33.0 37.0 28.0 37.0 6 31.801557080507987 35.0 32.0 37.0 17.0 37.0 7 32.54387518920497 35.0 32.0 35.0 27.0 37.0 8 32.36558811351619 35.0 32.0 37.0 21.0 37.0 9 33.20864471549682 35.0 32.0 38.0 26.0 39.0 10 32.252017620666955 35.0 28.0 39.0 17.0 39.0 11 32.971851731183015 37.0 31.0 39.0 17.0 39.0 12 33.7406585350954 37.0 31.0 39.0 25.0 39.0 13 33.88800423547619 35.0 32.0 39.0 27.0 39.0 14 34.011881732472666 37.0 32.0 40.0 23.0 41.0 15 34.37081118871626 37.0 32.0 40.0 25.0 41.0 16 34.582917591480175 37.0 32.0 40.0 25.0 41.0 17 32.56946791830418 35.0 27.0 40.0 18.0 41.0 18 33.152952276229065 36.0 30.0 39.0 23.0 39.0 19 32.89281665953966 36.0 31.0 37.0 23.0 39.0 20 31.926602048504346 34.0 30.0 35.0 23.0 39.0 21 32.47498421877864 35.0 31.0 36.0 23.0 39.0 22 32.67734020240689 34.0 30.0 37.0 25.0 39.0 23 33.434937248433755 35.0 32.0 38.0 26.0 39.0 24 31.980655277036796 34.0 30.0 37.0 21.0 39.0 25 31.152823311409314 34.0 27.0 36.0 18.0 39.0 26 30.24640086338553 33.0 25.0 36.0 18.0 39.0 27 32.10526583721925 34.0 30.0 37.0 22.0 39.0 28 32.00297297847645 35.0 30.0 37.0 21.0 39.0 29 32.01788877802439 35.0 30.0 37.0 21.0 39.0 30 31.092895395955935 34.0 27.0 37.0 18.0 39.0 31 31.47179403639523 34.0 30.0 37.0 19.0 39.0 32 31.155416183048594 35.0 30.0 37.0 16.0 39.0 33 30.556615555872312 35.0 27.0 37.0 12.0 40.0 34 29.034128163880347 34.0 22.0 37.0 8.0 39.0 35 28.50467667162163 34.0 21.0 37.0 7.0 39.0 36 27.81203377520753 33.0 18.0 37.0 7.0 40.0 37 27.75546233887882 34.0 16.0 38.0 7.0 40.0 38 27.6344627936495 33.0 17.0 38.0 7.0 40.0 39 27.098060776368214 33.0 15.0 37.0 7.0 39.0 40 26.960838814338175 33.0 15.0 37.0 7.0 39.0 41 26.117293503566895 31.0 15.0 37.0 7.0 39.0 42 26.90261798584102 33.0 15.0 37.0 7.0 39.0 43 26.809128672952006 33.0 15.0 37.0 7.0 40.0 44 26.89000658399343 33.0 15.0 37.0 7.0 40.0 45 27.112786522497572 33.0 15.0 37.0 7.0 40.0 46 26.84418334724796 33.0 14.0 37.0 7.0 40.0 47 26.6062839805331 33.0 12.0 37.0 7.0 40.0 48 26.484480102085836 33.0 12.0 37.0 7.0 39.0 49 26.42589952961779 33.0 11.0 37.0 7.0 39.0 50 26.52724890888975 33.0 11.0 37.0 7.0 40.0 51 24.779863840300827 29.0 10.0 35.0 7.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 2.0 9 5.0 10 11.0 11 16.0 12 29.0 13 41.0 14 96.0 15 211.0 16 421.0 17 791.0 18 1370.0 19 2196.0 20 3352.0 21 4754.0 22 6477.0 23 8965.0 24 11894.0 25 16266.0 26 19753.0 27 19761.0 28 17868.0 29 17506.0 30 18513.0 31 20783.0 32 22909.0 33 24813.0 34 25553.0 35 24527.0 36 16290.0 37 7842.0 38 1613.0 39 25.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.12926347512676 2.1778085483312632 28.115688230942055 41.577239745599925 2 44.77692479993484 18.643222219959682 25.71694258350472 10.862910396600759 3 9.566474576961454 18.695147528966178 60.40746095420392 11.330916939868455 4 8.943031487778887 2.224303759663877 75.9148017674968 12.917862985060443 5 21.85919756731624 2.859964568612678 61.78161504680065 13.499222817270425 6 10.741072580043033 15.957020776911223 63.655338125394536 9.646568517651211 7 41.0990517691937 0.9906534443788308 55.20983933698508 2.700455449442397 8 40.95481479973121 12.913790411805032 41.74726967901335 4.384125109450406 9 37.9903208508963 2.049183109681185 41.20595681714825 18.75453922227426 10 25.13761903792244 12.523502141494768 47.90330353567235 14.435575284910437 11 21.19944069993959 14.220068283478248 52.69129215961772 11.88919885696444 12 15.709272570540362 12.470558689174421 54.26398419841577 17.556184541869445 13 14.946343847359955 14.219728902373632 61.74054993314192 9.093377317124492 14 13.453745749251663 19.063376027476295 51.72677106029445 15.756107162977596 15 9.124600378749314 14.442023525898174 62.67384797084038 13.75952812451214 16 9.989682814419625 14.361590204103797 51.8027924277288 23.845934553747785 17 11.02818899454954 16.455232238489888 57.884841203581146 14.63173756337942 18 11.048551860826597 14.441005382584319 56.3372633665248 18.173179390064277 19 11.884108140395174 18.84752964493949 51.250279989411304 18.018082225254027 20 13.79075118613696 16.15997067747256 59.19756731624211 10.851710820148378 21 14.522796228797166 22.508773001554367 51.18851262837091 11.779918141277566 22 11.397096255268892 14.190881508481134 55.75624291541944 18.655779320830533 23 12.347702729302844 21.974247761781616 52.403836364006594 13.274213144908945 24 13.320029594032324 15.57284136648408 51.709802005063565 19.39732703442003 25 10.14851317138067 24.427633767062385 49.71050791776117 15.713345143795774 26 11.186001208196734 16.345951522803016 56.11055678864023 16.357490480360013 27 14.231607241035249 18.38834701039185 50.418117520888906 16.961928227683995 28 9.64962294759277 19.22695771990199 56.59824743597576 14.525171896529491 29 16.05068996178569 16.555349664352086 50.776503967365116 16.617456406497112 30 14.725746129358502 22.114412157988692 51.18240376848778 11.97743794416502 31 14.604926456114628 19.43058638267256 47.234383378471016 18.730103782741793 32 18.080188967399053 21.45567343392589 45.55410752950919 14.91003006916587 33 15.848758204538205 18.359499616499352 44.069993959016344 21.721748219946107 34 16.819388163744595 26.9916580124485 41.34238802120453 14.846565802602374 35 20.277681619798134 20.93811724938402 39.748993735024804 19.035207395793034 36 15.694339801937188 30.124824370278358 37.38384681694462 16.796989010839834 37 17.920001086019536 21.669144148730375 40.82245616893034 19.58839859631975 38 21.415287082476393 24.44256653566556 36.949439003034065 17.192707378823975 39 16.710786210266956 26.38314769186911 37.86984055875705 19.036225539106884 40 24.470395786244207 20.41682787269136 38.74340752204281 16.36936881902163 41 16.286559829494934 30.765915276901048 36.45258506587387 16.49493982773015 42 19.143809349270672 21.177720309244062 42.08291759148018 17.59555275000509 43 17.945454668865857 25.14304913559633 36.56661711702539 20.344879078512424 44 20.546132073550673 21.711906167912197 38.10910423751247 19.63285752102466 45 16.15997067747256 22.090655480665458 38.54724524357382 23.20212859828816 46 20.393749957577363 25.348374703889988 34.65047140035431 19.60740393817834 47 15.981116835339076 20.54545331134144 44.80203900167654 18.671390851642943 48 18.59774515194092 24.55931363565402 34.82661019365086 22.0163310187542 49 16.976521615182552 19.634893807652364 40.59642835325501 22.79215622391008 50 17.811059751437277 20.714804482545627 37.849477692479994 23.6246580735371 51 17.793072552892543 20.44567526658386 36.205515621712244 25.555736558811354 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 32.0 1 174.5 2 317.0 3 12242.0 4 24167.0 5 17584.5 6 11002.0 7 10771.5 8 10541.0 9 10493.0 10 10445.0 11 9826.0 12 9207.0 13 8732.0 14 8257.0 15 7663.0 16 7069.0 17 6602.0 18 6135.0 19 5724.5 20 5314.0 21 4837.0 22 4360.0 23 4168.0 24 3976.0 25 3724.0 26 3370.0 27 3268.0 28 3289.0 29 3310.0 30 3243.5 31 3177.0 32 3538.0 33 3899.0 34 4439.0 35 4979.0 36 5263.5 37 5548.0 38 5967.0 39 6386.0 40 7236.0 41 8086.0 42 8904.5 43 9723.0 44 11515.0 45 13307.0 46 28091.0 47 42875.0 48 33816.5 49 24758.0 50 21854.0 51 18950.0 52 15417.5 53 11885.0 54 10037.5 55 8190.0 56 7099.5 57 6009.0 58 5182.5 59 4356.0 60 3893.0 61 3430.0 62 2992.0 63 2554.0 64 2204.5 65 1855.0 66 1571.0 67 1287.0 68 1107.5 69 928.0 70 750.5 71 573.0 72 511.5 73 450.0 74 351.5 75 202.0 76 151.0 77 110.0 78 69.0 79 63.5 80 58.0 81 42.0 82 26.0 83 19.5 84 13.0 85 8.0 86 3.0 87 2.0 88 1.0 89 1.0 90 1.0 91 0.5 92 0.0 93 0.5 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 294654.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.12877104065209 #Duplication Level Percentage of deduplicated Percentage of total 1 86.77347535792418 46.10168104692821 2 6.188285298342063 6.575519854996976 3 2.2677272200341188 3.6144468076754146 4 1.2100707950587963 2.571582968546345 5 0.7566801151962955 2.0100742295639114 6 0.5483731324726644 1.7480634359991216 7 0.40989843245905594 1.5244179977627563 8 0.3360916663804865 1.4284909753440076 9 0.2670946004198207 1.27713670847092 >10 1.1292508598388697 9.432166652512592 >50 0.061724078034499134 2.265150186919074 >100 0.04353171819275203 4.786087677786187 >500 0.0019491814116157622 0.7808244015255937 >1k 0.0038983628232315245 4.339409173995685 >5k 0.0012994542744105082 5.731223491834409 >10k+ 6.497271372052541E-4 5.813724390138837 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 16842 5.715856563969944 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGACGAGATCGTATGCCG 9255 3.140972123236067 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAGACGAGATCGTATGC 7348 2.493772356730267 No Hit GAATCTGTCTCTTATACACATCTGACGCAGACGAGATCGTATGCCGTCTTC 4762 1.616132820189103 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAGACGAGAT 2066 0.7011613621400015 No Hit GCTGTCTCTTATACACATCTGACGCAGACGAGATCGTATGCCGTCTTCTGC 1724 0.5850930243607757 Illumina Single End Adapter 2 (95% over 22bp) GAACTGTCTCTTATACACATCTGACGCAGACGAGATCGTATGCCGTCTTCT 1564 0.5307920476219566 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAGACGAGATCGTATGCCGTC 1234 0.41879628309814226 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAGACGAGATCGTA 1221 0.41438432873811315 No Hit GAATGATACCTGTCTCTTCTACACATCTGACGCAGACGAGATCGTATGCCG 803 0.2725230270079483 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGACGAGATCGTATGCCT 732 0.24842696858009733 No Hit GAATGACTGTCTCTTATACACATCTGACGCAGACGAGATCGTATGCCGTCT 727 0.24673006305700923 No Hit GAATCTTTCTCTTATACACATCTGACGCAGACGAGATCGTATGCCGTCTTC 485 0.16459983573954537 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCAGACGAGATCGT 467 0.1584909758564282 No Hit GAATGATACGGCTGCCTCCTATACACATCTGACGCAGACGAGATCGTATGC 446 0.1513639726594582 No Hit GAATGCTGTCTCTTATACACATCTGACGCAGACGAGATCGTATGCCGTCTT 407 0.13812810957937108 No Hit GAATGACTCTCTCTTATACACATCTGACGCAGACGAGATCGTATGCCGTCT 403 0.13677058516090057 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC 386 0.13100110638240106 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGACGAGATCGTATGCC 369 0.12523162760390152 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 365 0.12387410318543104 No Hit GAATCTGTCTCTTATACACATCTGACGCAGACGAGATCGTATGCCTGTCTC 364 0.12353472208081342 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTT 356 0.12081967324387248 No Hit GAATCTGTCTCTTATCCACATCTGACGCAGACGAGATCGTATGCCGTCTTC 355 0.12048029213925485 No Hit CTGTCTCTTATACACATCTGACGCAGACGAGATCGTATGCCGTCTTCTGCT 327 0.11097762120996152 Illumina Single End Adapter 2 (95% over 23bp) GAATCTGTCTCTTATCCCCATCTGACGCAGACGAGATCGTATGCCGTCTTC 298 0.10113556917605054 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.16222416800722203 0.0 2 0.0 0.0 0.0 1.0968797301241455 0.0 3 0.0 0.0 0.0 1.3466642231227135 0.0 4 0.0 0.0 0.0 2.338335810815397 0.0 5 0.0 0.0 0.0 4.744547842554318 0.0 6 0.0 0.0 0.0 5.218663245705132 0.0 7 0.0 0.0 0.0 5.801041221228967 0.0 8 0.0 0.0 0.0 6.648475839459162 0.0 9 0.0 0.0 0.0 6.88977580484229 0.0 10 0.0 0.0 0.0 11.49857120554956 0.0 11 0.0 0.0 0.0 12.271681361868497 0.0 12 0.0 0.0 0.0 15.77103993158077 0.0 13 0.0 0.0 0.0 16.153183055380207 0.0 14 3.393811046176193E-4 0.0 0.0 16.374459535590898 0.0 15 3.393811046176193E-4 0.0 0.0 17.090214285229454 0.0 16 3.393811046176193E-4 0.0 0.0 17.53276724565083 0.0 17 3.393811046176193E-4 0.0 0.0 17.975659587176825 0.0 18 3.393811046176193E-4 0.0 0.0 18.381898769404113 0.0 19 3.393811046176193E-4 0.0 0.0 19.591113645156693 0.0 20 3.393811046176193E-4 0.0 0.0 20.000067876220925 0.0 21 3.393811046176193E-4 0.0 0.0 20.45246288867621 0.0 22 3.393811046176193E-4 0.0 0.0 21.055882492686337 0.0 23 3.393811046176193E-4 0.0 0.0 21.532373563569475 0.0 24 3.393811046176193E-4 0.0 0.0 21.899244537661122 0.0 25 3.393811046176193E-4 0.0 0.0 22.199936196352333 0.0 26 3.393811046176193E-4 0.0 0.0 22.491464565218866 0.0 27 3.393811046176193E-4 0.0 0.0 22.784350458503873 0.0 28 3.393811046176193E-4 0.0 0.0 23.064679250918026 0.0 29 3.393811046176193E-4 0.0 0.0 23.382339964840117 0.0 30 3.393811046176193E-4 0.0 0.0 23.70984273079612 0.0 31 3.393811046176193E-4 0.0 0.0 24.02478839588127 0.0 32 3.393811046176193E-4 0.0 0.0 24.33532210660639 0.0 33 3.393811046176193E-4 0.0 0.0 24.64653457954075 0.0 34 3.393811046176193E-4 0.0 0.0 24.932293469628785 0.0 35 3.393811046176193E-4 0.0 0.0 25.25640242453861 0.0 36 3.393811046176193E-4 0.0 0.0 25.57576004398379 0.0 37 3.393811046176193E-4 0.0 0.0 25.877469845988855 0.0 38 3.393811046176193E-4 0.0 0.0 26.2019181820033 0.0 39 3.393811046176193E-4 0.0 0.0 26.5409599055163 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGTCA 20 7.02474E-4 45.0 6 GGGCTTA 25 3.883723E-5 45.0 7 CTCGTCC 20 7.02474E-4 45.0 37 CGTGCGG 35 1.2078272E-7 45.0 2 CGTCTCG 20 7.02474E-4 45.0 42 CGATTCG 20 7.02474E-4 45.0 10 CCTCGTC 20 7.02474E-4 45.0 36 TACGGAT 25 3.883723E-5 45.0 29 TGTTGCG 25 3.883723E-5 45.0 1 ACGGATC 25 3.883723E-5 45.0 30 TCGTCCC 20 7.02474E-4 45.0 38 TAGGGTA 20 7.02474E-4 45.0 5 GAACGTT 20 7.02474E-4 45.0 13 GATGCAT 20 7.02474E-4 45.0 20 CCGGTGA 35 1.2078272E-7 45.0 18 TGGGCGC 20 7.02474E-4 45.0 6 CACCGGT 165 0.0 45.0 16 CCATTCT 20 7.02474E-4 45.0 44 GCGACCT 120 0.0 44.999996 11 GATCCGT 60 0.0 44.999996 5 >>END_MODULE