##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933379.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 185849 Sequences flagged as poor quality 0 Sequence length 51 %GC 35 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.3411533018741 31.0 26.0 31.0 16.0 33.0 2 28.309972074103168 31.0 28.0 33.0 16.0 34.0 3 28.465576893069105 31.0 28.0 33.0 16.0 34.0 4 31.888264128405318 35.0 28.0 37.0 19.0 37.0 5 33.72463666740203 35.0 33.0 37.0 30.0 37.0 6 32.294771561859356 35.0 32.0 37.0 17.0 37.0 7 32.39658001926295 35.0 32.0 35.0 26.0 37.0 8 32.65753380432502 35.0 32.0 36.0 25.0 37.0 9 33.23185489295073 35.0 32.0 37.0 26.0 39.0 10 32.06141545017729 35.0 28.0 39.0 15.0 39.0 11 32.53640858976912 37.0 29.0 39.0 17.0 39.0 12 33.42331677867516 35.0 31.0 39.0 24.0 39.0 13 33.51578431952822 35.0 32.0 39.0 25.0 39.0 14 33.694079602257744 36.0 32.0 40.0 21.0 41.0 15 34.222971336945584 37.0 32.0 40.0 25.0 41.0 16 34.51899122405824 37.0 32.0 40.0 25.0 41.0 17 32.52142330601725 36.0 27.0 40.0 18.0 41.0 18 33.18397193420465 36.0 30.0 39.0 23.0 39.0 19 32.91256342514622 36.0 31.0 37.0 22.0 39.0 20 32.236805148265525 34.0 30.0 36.0 23.0 39.0 21 32.654574412560734 35.0 31.0 37.0 24.0 39.0 22 32.88289955824352 34.0 30.0 37.0 25.0 39.0 23 33.73701230568903 35.0 32.0 38.0 27.0 40.0 24 32.21716554837529 35.0 31.0 37.0 21.0 39.0 25 31.40742215454482 34.0 29.0 37.0 18.0 39.0 26 30.552513061679104 33.0 25.0 37.0 18.0 39.0 27 32.32656081012004 34.0 30.0 37.0 22.0 39.0 28 32.262035308234104 35.0 31.0 37.0 21.0 39.0 29 32.3436338102438 35.0 30.0 38.0 21.0 40.0 30 31.363397166516904 34.0 29.0 37.0 18.0 40.0 31 31.749576268906477 35.0 30.0 37.0 20.0 39.0 32 31.52142330601725 35.0 30.0 37.0 18.0 39.0 33 31.211149912025355 35.0 30.0 38.0 15.0 40.0 34 30.079263272872062 35.0 25.0 38.0 10.0 40.0 35 29.563188394879713 35.0 24.0 38.0 8.0 40.0 36 28.84416381040522 34.0 22.0 38.0 7.0 40.0 37 28.90036535036508 34.0 21.0 38.0 7.0 40.0 38 28.737916265355206 34.0 21.0 38.0 7.0 40.0 39 28.23839245839364 33.0 20.0 37.0 7.0 40.0 40 28.022233103218205 33.0 20.0 37.0 7.0 40.0 41 27.329353399803065 33.0 18.0 37.0 7.0 40.0 42 27.97090648860096 33.0 20.0 37.0 7.0 40.0 43 27.810324510758733 33.0 18.0 37.0 7.0 40.0 44 27.809581972461515 33.0 18.0 37.0 7.0 40.0 45 28.120355772697188 34.0 20.0 38.0 7.0 40.0 46 27.736339716651692 33.0 18.0 38.0 7.0 40.0 47 27.555967478974868 33.0 18.0 38.0 7.0 40.0 48 27.4977427911907 33.0 18.0 37.0 7.0 40.0 49 27.46014237364742 33.0 18.0 37.0 7.0 39.0 50 27.49695182648279 33.0 18.0 37.0 7.0 40.0 51 25.907231139258215 31.0 15.0 35.0 7.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 5.0 10 6.0 11 5.0 12 10.0 13 28.0 14 34.0 15 87.0 16 248.0 17 415.0 18 746.0 19 1185.0 20 1763.0 21 2561.0 22 3446.0 23 4786.0 24 6462.0 25 8721.0 26 11212.0 27 11817.0 28 11345.0 29 11321.0 30 11732.0 31 13095.0 32 14312.0 33 15273.0 34 16866.0 35 17516.0 36 12729.0 37 6649.0 38 1437.0 39 35.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.293388718798592 2.294335724163165 30.262740181545233 41.14953537549301 2 42.847688176960865 15.082136573239566 29.711755242158954 12.35842000764061 3 11.802054355955642 14.98797410801242 60.96239420174443 12.247577334287513 4 10.548348390359916 2.66345258785358 72.58042819708473 14.207770824701774 5 20.880392146312328 3.304833493857917 61.36756183783609 14.447212521993661 6 12.300308314814714 13.850491528068487 63.00706487524819 10.842135281868613 7 46.74601423736474 1.1025079500024213 49.54828920252463 2.603188610108206 8 47.28623775215363 11.177353658077257 37.770448051913114 3.7659605378560017 9 43.908226571033474 2.5843561170627765 37.81618410645201 15.691233205451738 10 26.041571383219708 16.7824416596269 43.74357677469343 13.432410182459954 11 23.34206802296488 15.429192516505335 49.80279689425286 11.425942566276923 12 18.50534573766875 13.838115889781488 51.01507137514864 16.641466997401118 13 16.34714203466255 14.757679621628311 58.0659567713574 10.829221572351749 14 14.382105903179463 19.152107355971783 49.78181211628795 16.6839746245608 15 10.613455009174116 15.128410699008334 59.48700288944251 14.771131402375046 16 11.95701887015803 14.56720240625454 50.781010390155444 22.69476833343198 17 12.528450516279346 16.023223154281162 56.11598663431066 15.33233969512884 18 12.19484635376031 14.881436004498275 54.474331311979086 18.449386329762334 19 13.495364516354675 17.736441950185366 50.783700746304795 17.984492787155162 20 15.754187539346459 16.073801849888888 56.657286291559274 11.514724319205376 21 16.252441498205535 22.224494078526117 49.26526373561332 12.257800687655033 22 12.923932870233362 15.120339630560295 53.66184375487627 18.293883744330074 23 13.620735112914248 22.105042265495108 50.1751421853225 14.099080436268153 24 14.635537452447956 15.590613885466158 50.63196465948162 19.141884002604264 25 12.233587482310908 22.64149928167491 48.60020769549473 16.524705540519456 26 11.988765072720327 17.463101765411707 53.76084886117224 16.787284300695728 27 13.37214620471458 20.192737114539224 49.70917250025558 16.72594418049061 28 10.763038811077811 20.08566093979521 54.872504022082445 14.278796227044536 29 15.569629107501251 17.34956873590926 49.82701009959698 17.253792056992502 30 12.765201857421884 23.04935727391592 51.18886838239646 12.99657248626573 31 15.289832067969158 19.869356305387704 46.23753692513815 18.603274701504986 32 17.734289665265887 22.088362057369153 45.01988173194367 15.157466545421283 33 16.485964411968858 18.50695995135836 43.84850066451797 21.158574972154813 34 16.224999865482193 25.972160194566555 41.85817518523102 15.94466475472023 35 13.790227550323111 24.703926305764355 40.91816474664916 20.587681397263367 36 16.988522940666886 27.913521191935388 38.171311118165825 16.926644749231905 37 14.711943567089412 25.2748198806558 40.338123960849934 19.67511259140485 38 20.372990976545474 25.36736813219334 37.16619406076976 17.09344683049142 39 17.1746955862017 25.798901258548607 37.8463160953247 19.180087059924993 40 19.24788403488854 21.639610651658067 38.26547358339297 20.847031730060426 41 19.91294007500713 25.54600778050998 36.85572696113512 17.68532518334777 42 15.751497183197111 21.576118246533476 41.00533228588801 21.667052284381406 43 20.40688946402725 22.20350930056121 36.65933096223278 20.730270273178764 44 18.669457462778922 23.93340830459136 38.56464118720036 18.832493045429356 45 15.754725610576328 23.230149207152042 38.36017411984999 22.654951062421645 46 19.863975593089016 25.187652341416957 35.26088383580218 19.687488229691848 47 16.03721300625777 21.632077654439893 43.71183057213114 18.6188787671712 48 18.605426986424465 25.253835102690896 35.646142836388684 20.49459507449596 49 15.823598727999613 20.45854430209471 40.389778798917405 23.328078170988277 50 20.057143164612132 19.55566077837384 37.43415353324473 22.953042523769295 51 18.350381223466364 20.477376795140138 36.99239705352195 24.179844927871553 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 25.0 1 149.5 2 274.0 3 8824.0 4 17374.0 5 12049.0 6 6724.0 7 6560.0 8 6396.0 9 6259.5 10 6123.0 11 5737.5 12 5352.0 13 4887.0 14 4422.0 15 4022.5 16 3623.0 17 3294.5 18 2966.0 19 2830.5 20 2695.0 21 2404.5 22 2114.0 23 2044.0 24 1974.0 25 1907.0 26 1855.0 27 1870.0 28 2030.0 29 2190.0 30 2343.0 31 2496.0 32 2668.0 33 2840.0 34 3061.5 35 3283.0 36 3610.0 37 3937.0 38 4065.0 39 4193.0 40 4839.0 41 5485.0 42 6000.0 43 6515.0 44 7549.0 45 8583.0 46 15679.5 47 22776.0 48 18469.0 49 14162.0 50 12977.0 51 11792.0 52 9803.0 53 7814.0 54 6790.0 55 5766.0 56 5364.5 57 4963.0 58 4578.5 59 4194.0 60 3739.5 61 3285.0 62 2972.5 63 2660.0 64 2179.5 65 1699.0 66 1399.0 67 1099.0 68 881.5 69 664.0 70 634.0 71 604.0 72 503.5 73 403.0 74 355.5 75 238.5 76 169.0 77 135.0 78 101.0 79 70.5 80 40.0 81 37.0 82 34.0 83 23.0 84 12.0 85 9.0 86 6.0 87 3.5 88 1.0 89 0.5 90 0.0 91 1.0 92 2.0 93 1.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 185849.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.579222917529826 #Duplication Level Percentage of deduplicated Percentage of total 1 83.08891940986221 40.363951379883666 2 6.1937884896548665 6.017788634859483 3 2.80337601346861 4.085574848398431 4 1.6747153426963801 3.2542547982501926 5 1.3202782331310088 3.206904530021684 6 1.0068229143591334 2.934640487707763 7 0.729918922511187 2.482122583387589 8 0.5925745425546055 2.302944863841075 9 0.49621195339152013 2.1695031988334614 >10 2.0047849009791325 14.609710033414222 >50 0.04430463869567144 1.4990664464161765 >100 0.036551326923928935 3.4049147426136273 >500 0.001107615967391786 0.2701117573944439 >1k 0.004430463869567144 4.486437914651142 >5k 0.001107615967391786 2.703807930093786 >10k+ 0.001107615967391786 6.2082658502332535 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11538 6.2082658502332535 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAAACGACGTCGTATGCCG 5025 2.703807930093786 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAAACGACGTCGTATGC 4032 2.1695031988334614 No Hit GAATCTGTCTCTTATACACATCTGACGCAAACGACGTCGTATGCCGTCTTC 2016 1.0847515994167307 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAAACGACGT 1173 0.631157552636818 No Hit GCTGTCTCTTATACACATCTGACGCAAACGACGTCGTATGCCGTCTTCTGC 1117 0.6010255637641311 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAAACGACGTCGTA 502 0.2701117573944439 No Hit GAACTGTCTCTTATACACATCTGACGCAAACGACGTCGTATGCCGTCTTCT 500 0.26903561493470507 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAAACGACGTCGTATGCCGTC 460 0.24751276573992867 No Hit GAATGACTGTCTCTTATACACATCTGACGCAAACGACGTCGTATGCCGTCT 408 0.21953306178671933 No Hit GAATGATACCTGTCTCTTCTACACATCTGACGCAAACGACGTCGTATGCCG 384 0.20661935226985345 No Hit CTGTCTCTTATACACATCTGACGCAAACGACGTCGTATGCCGTCTTCTGCT 313 0.16841629494912538 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCAAACGACGTCGT 211 0.11353302950244554 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 204 0.10976653089335967 No Hit GAATCTTTCTCTTATACACATCTGACGCAAACGACGTCGTATGCCGTCTTC 200 0.10761424597388201 No Hit CCTGTCTCTTATACACATCTGACGCAAACGACGTCGTATGCCGTCTTCTGC 193 0.10384774736479614 No Hit TCTGTCTCTTATACACATCTGACGCAAACGACGTCGTATGCCGTCTTCTGC 190 0.10223353367518793 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.21684270563737226 0.0 2 0.0 0.0 0.0 1.188599346781527 0.0 3 0.0 0.0 0.0 1.4022136250396828 0.0 4 0.0 0.0 0.0 2.0037772600336834 0.0 5 0.0 0.0 0.0 3.5814021060107937 0.0 6 0.0 0.0 0.0 3.864965644151973 0.0 7 0.0 0.0 0.0 4.2954226280475005 0.0 8 0.0 0.0 0.0 4.801209584124747 0.0 9 0.0 0.0 0.0 4.936803534051838 0.0 10 0.0 0.0 0.0 8.827058526007672 0.0 11 0.0 0.0 0.0 9.463596790943186 0.0 12 0.0 0.0 0.0 12.545668795635166 0.0 13 0.0 0.0 0.0 12.813090196880262 0.0 14 0.0 0.0 0.0 12.978278064450173 0.0 15 0.0 0.0 0.0 13.482988878067678 0.0 16 0.0 0.0 0.0 13.8273544651841 0.0 17 0.0 0.0 0.0 14.158268271553789 0.0 18 0.0 0.0 0.0 14.46712115749883 0.0 19 0.0 0.0 0.0 15.567476822581773 0.0 20 0.0 0.0 0.0 15.905385554939762 0.0 21 0.0 0.0 0.0 16.23683743253932 0.0 22 0.0 0.0 0.0 16.819568574487892 0.0 23 0.0 0.0 0.0 17.21451285721204 0.0 24 0.0 0.0 0.0 17.44964998466497 0.0 25 0.0 0.0 0.0 17.67833025735947 0.0 26 0.0 0.0 0.0 17.87687854118128 0.0 27 0.0 0.0 0.0 18.07058418393427 0.0 28 0.0 0.0 0.0 18.265365969146995 0.0 29 0.0 0.0 0.0 18.47090917895711 0.0 30 0.0 0.0 0.0 18.697437166732133 0.0 31 0.0 0.0 0.0 18.914279872369505 0.0 32 0.0 0.0 0.0 19.113366227421185 0.0 33 0.0 0.0 0.0 19.34581299872477 0.0 34 0.0 0.0 0.0 19.559965348212796 0.0 35 0.0 0.0 0.0 19.77519384016056 0.0 36 0.0 0.0 0.0 19.963518770614854 0.0 37 0.0 0.0 0.0 20.19542747068857 0.0 38 0.0 0.0 0.0 20.400432609268815 0.0 39 0.0 0.0 0.0 20.645255018859398 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACCACCG 175 0.0 45.000004 14 CTTAATG 20 7.0180104E-4 45.0 45 TCTTGCG 40 6.7611836E-9 45.0 1 CTCGTTG 25 3.8781487E-5 45.0 1 CACGGGA 20 7.0180104E-4 45.0 4 ACCGCTG 20 7.0180104E-4 45.0 17 TCGGGCA 20 7.0180104E-4 45.0 5 TTATACG 25 3.8781487E-5 45.0 26 GCACACA 20 7.0180104E-4 45.0 9 CGGTGAC 20 7.0180104E-4 45.0 19 CCGGTGA 25 3.8781487E-5 45.0 18 ACCCGTC 20 7.0180104E-4 45.0 17 GAACATG 25 3.8781487E-5 45.0 9 ATACGGA 20 7.0180104E-4 45.0 28 GGATTAG 20 7.0180104E-4 45.0 8 GGCGACT 100 0.0 45.0 10 CCGCCTC 35 1.2045894E-7 45.0 15 CACCCGT 25 3.8781487E-5 45.0 16 GCGACCT 65 0.0 44.999996 11 CCTCGGG 30 2.1556534E-6 44.999996 3 >>END_MODULE