SRR2933378.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933378.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	616339
Sequences flagged as poor quality	0
Sequence length	51
%GC	36

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	25984	4.215861725446548	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGCCATCAATCGTATGCCG	14891	2.416040523153654	No Hit
GAATCTGTCTCTTATACACATCTGACGCGCCATCAATCGTATGCCGTCTTC	13824	2.2429215091045673	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGCCATCAATCGTATGC	12171	1.9747249484455793	No Hit
GAACTGTCTCTTATACACATCTGACGCGCCATCAATCGTATGCCGTCTTCT	3431	0.5566741679497809	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCGCCATCAATCGTATGCCGTC	2982	0.4838246484483377	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGCCATCAAT	2784	0.4516994705835587	No Hit
GCTGTCTCTTATACACATCTGACGCGCCATCAATCGTATGCCGTCTTCTGC	2604	0.4224947634337597	No Hit
GAATGACTGTCTCTTATACACATCTGACGCGCCATCAATCGTATGCCGTCT	2490	0.4039984489055536	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGCCATCAATCGTA	2409	0.39085633068814396	No Hit
GAATGCTGTCTCTTATACACATCTGACGCGCCATCAATCGTATGCCGTCTT	993	0.16111263444305812	No Hit
GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCGCCATCAATCGT	940	0.15251347067117285	No Hit
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	792	0.12850071145911585	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA	753	0.12217302490999271	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA	678	0.11000439693090978	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTATACC	20	7.0307363E-4	45.000004	34
ACGGTGA	35	1.2107012E-7	45.0	8
CGTTTTT	19540	0.0	44.4588	1
TACGGCT	1495	0.0	42.892975	7
TGATACC	1860	0.0	42.701614	4
CCGATGA	480	0.0	42.656254	18
ACGGCTG	1500	0.0	42.6	8
GATACCT	1885	0.0	42.25464	5
GTTGATC	155	0.0	42.096775	16
GCGATGT	75	0.0	42.0	9
ATACCTG	1940	0.0	41.404636	6
TGATCCG	60	3.6379788E-12	41.250004	4
CGGCTGT	1550	0.0	41.225807	9
AACACGT	155	0.0	40.645164	41
GAATGAT	6000	0.0	40.462498	1
TACCTGT	2005	0.0	40.286785	7
GAATCTG	1810	0.0	40.276245	1
ATGATAC	5845	0.0	40.22669	3
CGACCAC	1450	0.0	40.189655	12
CGATGAA	505	0.0	40.09901	19