SRR2933377.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933377.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	401186
Sequences flagged as poor quality	0
Sequence length	51
%GC	34

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	38386	9.568130493087994	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGCCATCAATCGTATGCCG	6586	1.6416325594611976	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGCCATCAATCGTATGC	4731	1.1792535133329678	No Hit
GAATCTGTCTCTTATACACATCTGACGCGCCATCAATCGTATGCCGTCTTC	4072	1.0149905530103243	No Hit
GCTGTCTCTTATACACATCTGACGCGCCATCAATCGTATGCCGTCTTCTGC	1407	0.35071014442178944	No Hit
GAACTGTCTCTTATACACATCTGACGCGCCATCAATCGTATGCCGTCTTCT	1280	0.31905400487554403	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGCCATCAAT	1149	0.28640082156406255	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCGCCATCAATCGTATGCCGTC	987	0.2460205490720015	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGCCATCAATCGTA	856	0.21336736576052007	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGCCATCAATCGTATGCC	623	0.1552895664355187	No Hit
GAATGACTGTCTCTTATACACATCTGACGCGCCATCAATCGTATGCCGTCT	593	0.14781173819624813	No Hit
GAATGATACCTGTCTCTTCTACACATCTGACGCGCCATCAATCGTATGCCG	551	0.13734277866126934	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA	526	0.13111125512854385	No Hit
GAATCTTTCTCTTATACACATCTGACGCGCCATCAATCGTATGCCGTCTTC	433	0.10792998758680512	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA	423	0.10543737817371493	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCTGGTC	20	7.027789E-4	45.000004	38
CGTGCGG	20	7.027789E-4	45.000004	2
ACAATAG	20	7.027789E-4	45.000004	11
CTTAGTA	20	7.027789E-4	45.000004	29
GTTCATG	25	3.8862505E-5	45.0	18
ATCGGAA	25	3.8862505E-5	45.0	23
CGGTAGG	35	1.2092823E-7	45.0	31
AACGACG	30	2.1619562E-6	44.999996	11
CGTTTTT	15175	0.0	44.555187	1
TACGGCT	790	0.0	43.57595	7
TGATACC	870	0.0	42.672417	4
GATACCT	875	0.0	42.428574	5
TCGTTTG	75	0.0	42.000004	1
ACGGCTG	820	0.0	41.98171	8
CGATGAA	70	0.0	41.785713	19
GAATGAT	2595	0.0	41.35838	1
TGATCCG	60	3.6379788E-12	41.249996	4
GTTGATC	60	3.6379788E-12	41.249996	16
CACCGGT	120	0.0	41.249996	16
ATGATAC	2485	0.0	41.016098	3