##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933376.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 411962 Sequences flagged as poor quality 0 Sequence length 51 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.192156072647478 31.0 28.0 31.0 25.0 34.0 2 28.27119248862759 31.0 26.0 33.0 16.0 34.0 3 28.300224292531837 31.0 25.0 33.0 16.0 34.0 4 32.89148999179536 35.0 32.0 37.0 28.0 37.0 5 34.114287240085254 35.0 33.0 37.0 30.0 37.0 6 33.34238109340182 35.0 32.0 37.0 28.0 37.0 7 33.39270369597196 35.0 32.0 37.0 28.0 37.0 8 33.18295619498886 35.0 32.0 37.0 28.0 37.0 9 34.466577014384825 37.0 34.0 39.0 28.0 39.0 10 34.347745665862384 37.0 32.0 39.0 27.0 39.0 11 34.55968268918007 37.0 33.0 39.0 27.0 39.0 12 34.656215864570036 37.0 33.0 39.0 27.0 39.0 13 34.77717605021822 37.0 33.0 39.0 27.0 39.0 14 35.554716211689424 38.0 34.0 40.0 27.0 41.0 15 35.78574722911336 38.0 34.0 40.0 27.0 41.0 16 35.78704346517397 38.0 34.0 40.0 27.0 41.0 17 35.02173501439453 37.0 33.0 40.0 27.0 41.0 18 34.85403993572223 37.0 33.0 39.0 27.0 40.0 19 34.201071943528774 37.0 32.0 38.0 27.0 40.0 20 33.60119622683646 35.0 32.0 38.0 25.0 40.0 21 34.11504216408309 35.0 33.0 38.0 27.0 40.0 22 34.718770177831935 35.0 33.0 39.0 28.0 40.0 23 35.041406731688845 35.0 33.0 39.0 29.0 40.0 24 34.583796563760735 35.0 33.0 39.0 27.0 40.0 25 33.602145343502556 35.0 32.0 38.0 24.0 40.0 26 33.70706521475282 35.0 32.0 38.0 24.0 40.0 27 34.318301202538095 35.0 33.0 39.0 26.0 40.0 28 34.050172103252244 35.0 33.0 39.0 25.0 40.0 29 34.105856850874595 35.0 33.0 39.0 24.0 40.0 30 33.5225457687845 35.0 33.0 39.0 22.0 40.0 31 33.489428636621824 35.0 33.0 39.0 22.0 40.0 32 32.8447987921216 35.0 31.0 39.0 18.0 40.0 33 32.38130215893699 35.0 31.0 39.0 15.0 40.0 34 32.112012758458306 35.0 31.0 39.0 12.0 40.0 35 31.731608740612 35.0 30.0 40.0 10.0 41.0 36 31.145057068370384 35.0 29.0 39.0 8.0 40.0 37 30.949500196620075 35.0 28.0 39.0 8.0 40.0 38 30.755822138935144 35.0 27.0 39.0 8.0 40.0 39 30.41276865341949 35.0 25.0 39.0 8.0 40.0 40 30.251319296439963 35.0 24.0 39.0 8.0 40.0 41 29.809205703438668 35.0 23.0 39.0 7.0 40.0 42 30.047283487311937 35.0 23.0 39.0 7.0 40.0 43 29.889960724532845 35.0 23.0 39.0 7.0 40.0 44 30.081473533966726 35.0 23.0 39.0 7.0 40.0 45 30.146239216238392 35.0 23.0 39.0 7.0 40.0 46 29.887385244270103 35.0 23.0 39.0 7.0 40.0 47 29.832943329724586 35.0 23.0 39.0 7.0 40.0 48 29.68612396288978 35.0 23.0 38.0 7.0 40.0 49 29.8518164296707 35.0 24.0 39.0 7.0 40.0 50 29.768405823838123 35.0 24.0 39.0 7.0 40.0 51 28.702666750816825 34.0 22.0 38.0 7.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 6.0 9 24.0 10 34.0 11 32.0 12 41.0 13 59.0 14 71.0 15 128.0 16 208.0 17 481.0 18 872.0 19 1747.0 20 2460.0 21 3620.0 22 5080.0 23 7099.0 24 9936.0 25 14241.0 26 18050.0 27 19798.0 28 19245.0 29 18508.0 30 19629.0 31 22387.0 32 26086.0 33 29788.0 34 34298.0 35 38811.0 36 42041.0 37 42003.0 38 30926.0 39 4252.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.576849321053885 2.625727615653871 31.492225011044706 35.30519805224754 2 34.08566809560105 19.271923138541904 32.28768672838757 14.354722037469475 3 12.824483811613693 19.54160820658216 53.68140750845952 13.952500473344628 4 11.510770410863138 2.9934799811633113 69.06947728188523 16.426272326088327 5 24.493763987940635 3.518042926289318 54.013719712012275 17.974473373757775 6 13.967064923463814 17.257659687058517 57.19993591641948 11.575339473058195 7 53.3532218991072 1.3884775780290415 42.28812366189115 2.970176860972614 8 52.010865079788914 13.35657172263461 31.117918642981635 3.514644554594841 9 49.098946019293045 2.9090061704720336 29.90469994805346 18.087347862181463 10 30.90916152460664 18.65293400847651 36.606531670396784 13.831372796520066 11 26.810482520232448 15.746597987192992 42.98673178594142 14.456187706633136 12 19.95014103242532 14.464198154198687 45.73334433758453 19.852316475791458 13 18.779644724513425 15.465018618222068 53.18378879605401 12.5715478612105 14 15.71091508440099 21.7898738233138 45.22917162262539 17.270039469659825 15 12.38803578970876 14.694316466081823 55.312868662643645 17.604779081565773 16 14.972740204193592 17.453551541161563 43.71786718192455 23.8558410727203 17 15.481767735859133 18.183958714638727 49.45310489802458 16.881168651477562 18 16.321651026065513 16.08959078749982 47.19634335205674 20.392414834377927 19 15.592457556764943 19.281875512790016 43.812050626028615 21.313616304416428 20 18.43859385088916 18.739349745850344 49.585884134944486 13.23617226831601 21 17.934906617600653 24.308795471426976 44.116933115190236 13.639364795782136 22 15.982784819959123 14.718833290449119 47.917040892121115 21.38134099747064 23 16.416562692675537 23.094120331486884 46.01589466989674 14.473422305940838 24 17.340434311902552 17.94874284521388 43.76714357149446 20.943679271389108 25 15.134405600516551 27.251542618008457 41.236813104121254 16.377238677353738 26 15.343648200562187 16.02769187449328 46.94365014248887 21.685009782455662 27 18.73570863332055 18.89785951131415 41.73855841072721 20.627873444638098 28 13.043921526742757 20.405522839485197 47.43520033401139 19.115355299760658 29 19.120938338973012 16.31194139265272 42.9066273102859 21.66049295808837 30 19.16511717100121 20.987615362581984 45.03206606434574 14.815201402071065 31 22.437749112782246 15.983755783300403 40.998198863001925 20.580296240915423 32 22.289191721566553 19.904020273714565 42.53134997888155 15.275438025837335 33 18.482287201246717 16.851068787897912 41.02587131822838 23.640772692626992 34 20.138750661468777 19.755948364169512 40.91154038479277 19.19376058956894 35 23.616741349930333 21.05194168394172 37.13206557886407 18.199251387263875 36 22.36371315800972 21.162874245682854 36.10721377214403 20.36619882416339 37 21.948869070448247 21.232298124584307 40.01801136998073 16.80082143498672 38 23.666260480335566 21.85152999548502 35.745772668352906 18.736436855826508 39 21.132288900432563 20.538544817240425 39.825517887572154 18.50364839475486 40 24.42652477655706 20.888334360936202 37.03958132060724 17.645559541899495 41 19.673173739325474 22.788024138148664 38.203280885130184 19.33552123739568 42 22.609124142518 21.108985780241866 38.15813108976071 18.123758987479427 43 21.38935144503619 19.99334890111224 35.61396439477428 23.003335259077293 44 23.769910817017102 20.893674659313238 34.27864705968026 21.057767463989396 45 20.815512110340272 19.645986765769656 34.57576184211165 24.96273928177842 46 24.24568285424384 23.16815628625941 32.754477354707475 19.831683504789275 47 16.82485277768338 20.945621198071667 43.113199761143015 19.11632626310194 48 21.321626751981977 24.041780552575236 32.37021861239629 22.266374083046493 49 20.105495167029968 20.202591501157873 38.002291473485414 21.68962185832674 50 19.966161927556424 20.209630985382145 36.39583262533923 23.4283744617222 51 20.23827440394988 20.39047290769537 33.13024016778247 26.241012520572287 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 30.0 1 512.5 2 995.0 3 11830.5 4 22666.0 5 16848.5 6 11031.0 7 10502.5 8 9974.0 9 9605.5 10 9237.0 11 8842.5 12 8448.0 13 7897.5 14 7347.0 15 6855.0 16 6363.0 17 5765.5 18 5168.0 19 4788.0 20 4408.0 21 4100.0 22 3792.0 23 3782.0 24 3772.0 25 3809.0 26 4205.5 27 4565.0 28 4733.5 29 4902.0 30 5378.0 31 5854.0 32 6476.5 33 7099.0 34 7909.5 35 8720.0 36 9199.5 37 9679.0 38 10235.0 39 10791.0 40 10957.0 41 11123.0 42 12165.5 43 13208.0 44 14453.0 45 15698.0 46 41227.5 47 66757.0 48 46591.0 49 26425.0 50 24842.0 51 23259.0 52 21068.0 53 18877.0 54 18285.0 55 17693.0 56 17210.5 57 16728.0 58 15604.0 59 14480.0 60 12982.0 61 11484.0 62 9939.5 63 8395.0 64 7282.5 65 6170.0 66 5180.0 67 4190.0 68 3590.5 69 2991.0 70 2505.5 71 2020.0 72 1632.5 73 1245.0 74 1153.0 75 904.0 76 747.0 77 575.5 78 404.0 79 298.0 80 192.0 81 134.5 82 77.0 83 51.5 84 26.0 85 18.0 86 10.0 87 9.0 88 8.0 89 6.0 90 4.0 91 2.0 92 0.0 93 1.0 94 2.0 95 1.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 411962.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.0982619214942 #Duplication Level Percentage of deduplicated Percentage of total 1 81.5507968593325 35.96248399809411 2 5.883973283044502 5.189459899495411 3 2.6551043756948514 3.5125646456489066 4 1.940215857770638 3.422405883208245 5 1.5083211106283998 3.3257169699105096 6 1.2136786160212538 3.21126704986931 7 1.0618695118290278 3.2778619901359956 8 0.8482006230221292 2.992333858880353 9 0.6731929959496378 2.6717976953192255 >10 2.5639639704397945 16.379577959400812 >50 0.0572946299200641 1.6996861197077509 >100 0.03615680528936083 2.783423062537718 >500 0.0016687756287397306 0.4837322886511307 >1k 0.003337551257479461 3.4582443232269986 >5k 0.0 0.0 >10k+ 0.0022250341716529743 11.629444255913517 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGCCG 14299 3.470951204237284 No Hit GAATCTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGCCGTCTTC 11238 2.727921507323491 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGC 11147 2.7058320913093925 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10725 2.603395458804453 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCGGTTTGTT 2702 0.6558857370339983 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGCCGTC 2409 0.5847626722853079 No Hit GAACTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGCCGTCTTCT 2406 0.5840344497793486 No Hit GAATGACTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGCCGTCT 2256 0.5476233244813843 No Hit GCTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGCCGTCTTCTGC 2202 0.5345153193741171 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTA 2123 0.5153387933838558 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCCGGTTTGTTCGT 811 0.1968628174443274 No Hit GAATGCTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGCCGTCTT 629 0.15268398541613062 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTAT 532 0.12913812439011366 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATG 454 0.11020433923517217 No Hit GCGCGCGGGAGAAACAAGCGAGATAGGAATGTCTTACACGCGGGGCAAGAC 422 0.10243663250493978 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.427408353197625E-4 0.0 0.0 0.08326010651467854 0.0 2 2.427408353197625E-4 0.0 0.0 0.7100169433103053 0.0 3 2.427408353197625E-4 0.0 0.0 0.8209495050514368 0.0 4 2.427408353197625E-4 0.0 0.0 1.530966448361742 0.0 5 2.427408353197625E-4 0.0 0.0 4.730533398711532 0.0 6 2.427408353197625E-4 0.0 0.0 5.000703948422427 0.0 7 2.427408353197625E-4 0.0 0.0 5.7044096300144185 0.0 8 2.427408353197625E-4 0.0 0.0 6.45981910952952 0.0 9 2.427408353197625E-4 0.0 0.0 6.592841087284749 0.0 10 2.427408353197625E-4 0.0 0.0 10.712395803496438 0.0 11 2.427408353197625E-4 0.0 0.0 10.913142474305882 0.0 12 2.427408353197625E-4 0.0 0.0 14.228739543938518 0.0 13 2.427408353197625E-4 0.0 0.0 14.479733567659153 0.0 14 2.427408353197625E-4 0.0 0.0 14.682422165151154 0.0 15 2.427408353197625E-4 0.0 0.0 15.394138294308698 0.0 16 4.85481670639525E-4 0.0 0.0 15.726935979532092 0.0 17 4.85481670639525E-4 0.0 0.0 15.894184415067409 0.0 18 4.85481670639525E-4 0.0 0.0 16.023565280292843 0.0 19 4.85481670639525E-4 0.0 0.0 16.93627082109515 0.0 20 4.85481670639525E-4 0.0 0.0 17.135318306057354 0.0 21 4.85481670639525E-4 0.0 0.0 17.274651545530897 0.0 22 4.85481670639525E-4 0.0 0.0 17.547492244430313 0.0 23 4.85481670639525E-4 0.0 0.0 17.683184371374058 0.0 24 4.85481670639525E-4 0.0 0.0 17.807710419893098 0.0 25 4.85481670639525E-4 0.0 0.0 17.904806754021003 0.0 26 4.85481670639525E-4 0.0 0.0 18.038071472611552 0.0 27 4.85481670639525E-4 0.0 0.0 18.24197377428015 0.0 28 4.85481670639525E-4 0.0 0.0 18.35509100353916 0.0 29 4.85481670639525E-4 0.0 0.0 18.492967798000787 0.0 30 4.85481670639525E-4 0.0 0.0 18.640068744204562 0.0 31 4.85481670639525E-4 0.0 0.0 18.75731256766401 0.0 32 4.85481670639525E-4 0.0 0.0 18.904656254703102 0.0 33 4.85481670639525E-4 0.0 0.0 19.034279860763856 0.0 34 4.85481670639525E-4 0.0 0.0 19.236725717420537 0.0 35 4.85481670639525E-4 0.0 0.0 19.40858622882693 0.0 36 4.85481670639525E-4 0.0 0.0 19.557871842548586 0.0 37 4.85481670639525E-4 0.0 0.0 19.71589612634175 0.0 38 4.85481670639525E-4 0.0 0.0 19.900621902020088 0.0 39 4.85481670639525E-4 0.0 0.0 20.180744825979094 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGAATG 20 7.02801E-4 45.000004 1 GCGATTC 40 6.7975634E-9 45.000004 9 CCGACAG 20 7.02801E-4 45.000004 43 CTCACCA 25 3.8864335E-5 45.0 31 ACGGGAG 50 2.1827873E-11 45.0 5 GCGGGTA 45 3.8380676E-10 45.0 5 ATCGAGT 25 3.8864335E-5 45.0 42 AATCGAG 25 3.8864335E-5 45.0 41 CATATGC 60 0.0 44.999996 33 CGTTTTT 9205 0.0 44.193375 1 ACGGCTG 1415 0.0 42.61484 8 TACGGCT 1410 0.0 42.606384 7 GAATCTG 1275 0.0 42.352943 1 CGGCTGT 1435 0.0 42.33449 9 CCGATGA 420 0.0 42.32143 18 CGATGAA 415 0.0 42.289158 19 TGATACC 1840 0.0 42.187496 4 GATACCT 1845 0.0 41.95122 5 GAATGAC 340 0.0 41.691177 1 GCCAGTA 65 0.0 41.538464 25 >>END_MODULE