##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933371.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 306275 Sequences flagged as poor quality 0 Sequence length 51 %GC 38 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.468167496530896 31.0 27.0 31.0 16.0 33.0 2 28.64494000489756 31.0 30.0 33.0 16.0 34.0 3 28.82970859521672 31.0 30.0 33.0 16.0 34.0 4 31.90527793649498 35.0 28.0 37.0 19.0 37.0 5 33.617161048077705 35.0 33.0 37.0 28.0 37.0 6 32.537977307974856 35.0 33.0 37.0 17.0 37.0 7 31.990645661578647 35.0 31.0 35.0 25.0 37.0 8 32.73692923026692 35.0 32.0 35.0 26.0 37.0 9 32.830182025957065 35.0 31.0 37.0 25.0 39.0 10 31.2783380948494 35.0 27.0 39.0 15.0 39.0 11 31.873597257366747 35.0 27.0 39.0 15.0 39.0 12 32.78703126275406 35.0 31.0 39.0 21.0 39.0 13 32.80250102032487 35.0 31.0 39.0 21.0 39.0 14 33.18389355970941 36.0 31.0 40.0 18.0 41.0 15 33.739642478165045 36.0 31.0 40.0 22.0 41.0 16 34.03185046118684 36.0 32.0 40.0 24.0 41.0 17 32.08280466900661 35.0 27.0 39.0 18.0 41.0 18 32.81478736429679 36.0 30.0 39.0 21.0 39.0 19 32.59044975920333 36.0 30.0 37.0 19.0 39.0 20 32.162651212145946 34.0 30.0 36.0 23.0 39.0 21 32.587367561831684 35.0 31.0 37.0 23.0 39.0 22 32.881436617418984 34.0 30.0 37.0 25.0 39.0 23 33.88458738062199 35.0 32.0 38.0 27.0 40.0 24 32.2139253938454 35.0 31.0 37.0 21.0 39.0 25 31.45114031507632 34.0 30.0 37.0 18.0 39.0 26 30.707700595869724 33.0 25.0 37.0 18.0 39.0 27 32.26719777977308 34.0 30.0 37.0 22.0 39.0 28 32.29949555138356 35.0 31.0 37.0 21.0 39.0 29 32.4560444045384 35.0 31.0 38.0 21.0 40.0 30 31.474883682964656 34.0 29.0 37.0 18.0 40.0 31 31.81832993225043 35.0 30.0 37.0 20.0 40.0 32 31.55910864419231 35.0 30.0 37.0 18.0 40.0 33 31.502306750469348 35.0 30.0 38.0 15.0 40.0 34 30.71925883601339 35.0 29.0 38.0 12.0 40.0 35 30.236333360541998 35.0 27.0 38.0 10.0 40.0 36 29.715507305526078 34.0 25.0 38.0 8.0 40.0 37 29.75274508203412 35.0 25.0 38.0 8.0 40.0 38 29.67435801159089 34.0 24.0 38.0 8.0 40.0 39 29.039376377438575 34.0 23.0 37.0 7.0 40.0 40 28.822904252714064 33.0 23.0 37.0 7.0 40.0 41 28.289164966125213 33.0 21.0 37.0 7.0 40.0 42 28.80270998285854 33.0 23.0 37.0 7.0 40.0 43 28.851323157293283 34.0 22.0 38.0 7.0 40.0 44 28.897386335809323 34.0 22.0 38.0 7.0 40.0 45 29.175923598073627 34.0 23.0 38.0 7.0 40.0 46 28.88451554975104 34.0 23.0 38.0 7.0 40.0 47 28.897889151905968 34.0 23.0 38.0 7.0 40.0 48 28.704158027916087 34.0 23.0 37.0 7.0 40.0 49 28.63194514733491 34.0 23.0 37.0 7.0 39.0 50 28.750675046934944 34.0 23.0 37.0 7.0 40.0 51 27.12667374091911 31.0 20.0 35.0 7.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 9.0 10 16.0 11 21.0 12 22.0 13 40.0 14 78.0 15 199.0 16 398.0 17 698.0 18 1158.0 19 1810.0 20 2679.0 21 3841.0 22 5182.0 23 7016.0 24 9468.0 25 12961.0 26 16230.0 27 17594.0 28 17923.0 29 18581.0 30 20292.0 31 22341.0 32 24784.0 33 26698.0 34 29263.0 35 31101.0 36 21851.0 37 11482.0 38 2486.0 39 50.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.476369275977472 2.4536772508366664 33.84964492694474 39.22030854624112 2 39.64117214921231 12.640600767284305 33.99395967676108 13.724267406742307 3 13.098032813647867 12.664109052322258 60.39441678230348 13.84344135172639 4 12.157701412129622 2.982287160231818 68.47343074034772 16.386580687290834 5 19.933393192392458 3.3571137050036732 59.72181862705085 16.987674475553018 6 14.103991510897071 11.658150355073055 62.37858134029876 11.859276793731125 7 52.58019753489511 1.4454330258754386 43.09558403395641 2.878785405273039 8 53.55677087584687 8.967431230103665 33.78565015100808 3.6901477430413845 9 49.49212309199249 2.9339645743204636 34.0879928169129 13.485919516774143 10 29.578320137131662 18.041302750795854 39.89323320545262 12.487143906619867 11 24.86686801077463 15.962452044731043 46.496449269447396 12.674230675046935 12 20.393437270426904 13.903844584115582 48.71798220553424 16.984735939923272 13 18.744265774222512 14.849073545016733 54.17908742143498 12.22757325932577 14 15.74630642396539 17.3820912578565 49.43596441106848 17.435637907109623 15 12.638315239572279 15.109623704187413 56.6481103583381 15.60395069790221 16 15.895518733164641 14.810546077871194 47.791363970288145 21.502571218676025 17 16.52175332625908 15.7015753816015 51.70843196473758 16.068239327401844 18 16.270671781895356 14.476206023998042 50.74785731776997 18.505264876336625 19 16.75226512121459 17.490164068239327 47.32446330911762 18.433107501428456 20 17.22438984572688 18.075585666476208 51.98791935352216 12.712105134274754 21 17.829075177536527 20.262182678964983 47.65455881152559 14.2541833319729 22 15.265366092563873 14.853644600440779 51.642804669006615 18.238184637988734 23 15.213125459146193 20.420210595053465 49.3011182760591 15.065545669741246 24 16.408129948575624 16.752591625173455 47.53603787445923 19.30324055179169 25 15.841972083911518 21.30960737898947 45.4565341604767 17.391886376622317 26 15.314015182434087 16.186107256550486 49.13133621745164 19.36854134356379 27 15.924251081544364 17.46502326340707 47.98106277038609 18.629662884662476 28 13.403314015182435 17.840502816096645 50.48273610317525 18.27344706554567 29 19.103420128969066 16.67063913149947 46.476532527956905 17.749408211574565 30 17.288058117704676 19.238919271896172 48.354583299322506 15.118439311076648 31 18.395886050118357 17.514651865153866 44.817565912986694 19.271896171741083 32 20.178924169455556 21.601175414251898 43.32870786058281 14.891192555709736 33 17.853236470492202 17.872826708023833 43.02277365113052 21.25116317035344 34 21.216880254673086 21.64133540119174 41.09966533344217 16.042119010693003 35 18.530732185127743 23.578483389111092 39.30813811117459 18.582646314586565 36 20.288302995673824 21.293282181046443 37.012815280385276 21.405599542894457 37 19.590890539547793 25.783691127254922 38.14153946616602 16.48387886703126 38 19.124969390253856 22.494163741735367 38.540527303893555 19.840339564117215 39 19.154354746551302 26.21010529752673 36.7166761896988 17.918863766223165 40 19.593502571218675 23.765243653579297 39.473349114358015 17.167904660844012 41 17.96000326503959 24.20243245449351 35.6875357113705 22.1500285690964 42 17.539792669986124 23.98073626642723 39.47302261039915 19.006448453187495 43 19.486082768753572 20.2066770059587 37.24202105950535 23.065219165782384 44 21.324300057138192 21.189453922128806 37.69977960982777 19.78646641090523 45 17.487225532609582 21.03599706146437 37.48722553260958 23.989551873316465 46 20.496612521426822 23.66794547383887 35.85568525018366 19.97975675455065 47 16.074769406579055 20.975920333034036 44.05387315321198 18.895437107174924 48 18.52648763366256 24.27165129377194 36.624928577259 20.576932495306504 49 17.703044649416373 21.43302587543874 40.51652926291731 20.347400212227573 50 18.604848583789078 20.272957309607378 38.30381193371969 22.818382172883847 51 18.25483633989062 21.276303975185698 37.386335809321686 23.082523875601993 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 62.0 1 332.0 2 602.0 3 15725.0 4 30848.0 5 20070.5 6 9293.0 7 8659.0 8 8025.0 9 7727.5 10 7430.0 11 7043.5 12 6657.0 13 6130.5 14 5604.0 15 5210.5 16 4817.0 17 4402.5 18 3988.0 19 3669.0 20 3350.0 21 3086.5 22 2823.0 23 2702.5 24 2582.0 25 2630.5 26 2777.0 27 2875.0 28 3148.5 29 3422.0 30 3639.5 31 3857.0 32 4553.0 33 5249.0 34 5389.5 35 5530.0 36 5925.0 37 6320.0 38 6896.0 39 7472.0 40 8021.0 41 8570.0 42 9622.0 43 10674.0 44 11850.0 45 13026.0 46 21856.5 47 30687.0 48 26025.5 49 21364.0 50 19939.5 51 18515.0 52 16453.0 53 14391.0 54 13733.5 55 13076.0 56 12403.5 57 11731.0 58 10885.5 59 10040.0 60 9159.0 61 8278.0 62 7341.0 63 6404.0 64 5712.0 65 5020.0 66 4252.5 67 3485.0 68 2930.5 69 2376.0 70 2090.0 71 1804.0 72 1570.0 73 1336.0 74 1072.5 75 686.0 76 563.0 77 435.0 78 307.0 79 237.5 80 168.0 81 128.0 82 88.0 83 74.5 84 61.0 85 35.0 86 9.0 87 8.0 88 7.0 89 3.5 90 0.0 91 0.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 306275.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.693848883726666 #Duplication Level Percentage of deduplicated Percentage of total 1 80.52785546816925 37.60155514161278 2 6.831437322969363 6.379722040347634 3 3.1578475485716564 4.423561686925549 4 2.0733775018624145 3.8725590300352914 5 1.6062270970921082 3.7500462672282935 6 1.2505957824484304 3.503707828816375 7 0.9588406724466715 3.134037302395702 8 0.7791562467953841 2.9105443235740247 9 0.6209701581789644 2.609593805458117 >10 2.101965734452402 14.116072861091048 >50 0.05362470379244197 1.7204729741572686 >100 0.031751469350788014 2.826820780978431 >500 0.0021167646233858674 0.7808351108297064 >1k 0.002822352831181156 3.2363473812996655 >5k 7.05588207795289E-4 1.9906353331785174 >10k+ 7.05588207795289E-4 7.143488132071601 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 21682 7.079258836013387 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGGCATAACTCGTATGCCG 6042 1.972736919435148 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGGCATAACTCGTATGC 4428 1.4457595298342993 No Hit GAATCTGTCTCTTATACACATCTGACGCGGCATAACTCGTATGCCGTCTTC 2897 0.945881968818872 No Hit GCTGTCTCTTATACACATCTGACGCGGCATAACTCGTATGCCGTCTTCTGC 1286 0.4198840910946045 Illumina PCR Primer Index 6 (95% over 23bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGGCATAACT 1212 0.3957227981389274 No Hit GAACTGTCTCTTATACACATCTGACGCGGCATAACTCGTATGCCGTCTTCT 899 0.29352705901559056 Illumina PCR Primer Index 6 (95% over 21bp) GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGGCATAACTCGTA 766 0.2501020324871439 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGGCATAACTCGTATGCCGTC 705 0.23018529099665333 No Hit GAATGACTGTCTCTTATACACATCTGACGCGGCATAACTCGTATGCCGTCT 456 0.14888580524038852 No Hit GAATGATACCTGTCTCTTCTACACATCTGACGCGGCATAACTCGTATGCCG 428 0.1397436943922945 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.2650395886050116E-4 0.0 0.0 0.11264386580687291 0.0 2 3.2650395886050116E-4 0.0 0.0 0.7976491714962044 0.0 3 3.2650395886050116E-4 0.0 0.0 0.959595135091013 0.0 4 3.2650395886050116E-4 0.0 0.0 1.523140968084238 0.0 5 3.2650395886050116E-4 0.0 0.0 2.9728185454248632 0.0 6 3.2650395886050116E-4 0.0 0.0 3.2513264223328706 0.0 7 3.2650395886050116E-4 0.0 0.0 3.6160313443800507 0.0 8 3.2650395886050116E-4 0.0 0.0 4.120153456860664 0.0 9 3.2650395886050116E-4 0.0 0.0 4.285364460044078 0.0 10 3.2650395886050116E-4 0.0 0.0 7.08807444290262 0.0 11 3.2650395886050116E-4 0.0 0.0 7.5366908823769485 0.0 12 3.2650395886050116E-4 0.0 0.0 9.898947024732674 0.0 13 3.2650395886050116E-4 0.0 0.0 10.122928740510979 0.0 14 3.2650395886050116E-4 0.0 0.0 10.270508529915926 0.0 15 3.2650395886050116E-4 0.0 0.0 10.722063505019998 0.0 16 3.2650395886050116E-4 0.0 0.0 10.988490735450167 0.0 17 3.2650395886050116E-4 0.0 0.0 11.219655538323401 0.0 18 3.2650395886050116E-4 0.0 0.0 11.43286262345931 0.0 19 3.2650395886050116E-4 0.0 0.0 12.13615215084483 0.0 20 3.2650395886050116E-4 0.0 0.0 12.39735531793323 0.0 21 3.2650395886050116E-4 0.0 0.0 12.636029711860257 0.0 22 3.2650395886050116E-4 0.0 0.0 13.026854950616276 0.0 23 3.2650395886050116E-4 0.0 0.0 13.274344951432536 0.0 24 3.2650395886050116E-4 0.0 0.0 13.454575136723532 0.0 25 3.2650395886050116E-4 0.0 0.0 13.626316219084156 0.0 26 3.2650395886050116E-4 0.0 0.0 13.785650151008081 0.0 27 3.2650395886050116E-4 0.0 0.0 13.9805730144478 0.0 28 3.2650395886050116E-4 0.0 0.0 14.144151497836912 0.0 29 3.2650395886050116E-4 0.0 0.0 14.337768345441189 0.0 30 3.2650395886050116E-4 0.0 0.0 14.564362092890375 0.0 31 3.2650395886050116E-4 0.0 0.0 14.742959758387071 0.0 32 3.2650395886050116E-4 0.0 0.0 14.913721328871112 0.0 33 3.2650395886050116E-4 0.0 0.0 15.08807444290262 0.0 34 3.2650395886050116E-4 0.0 0.0 15.301281528038528 0.0 35 3.2650395886050116E-4 0.0 0.0 15.539629418006694 0.0 36 3.2650395886050116E-4 0.0 0.0 15.746632927924251 0.0 37 3.2650395886050116E-4 0.0 0.0 15.934699208227899 0.0 38 3.2650395886050116E-4 0.0 0.0 16.16978205860746 0.0 39 3.2650395886050116E-4 0.0 0.0 16.659537996898212 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTTGATC 30 2.1602682E-6 45.000004 16 AGCCGTT 20 7.0251734E-4 45.000004 28 TAGCATA 20 7.0251734E-4 45.000004 30 ATCCCCG 35 1.2080272E-7 45.000004 38 GTCTTAT 80 0.0 45.000004 23 CGATGAA 135 0.0 45.0 19 GCTACGG 75 0.0 45.0 5 TCGGGTA 25 3.8840837E-5 44.999996 5 TTCGGGT 50 2.1827873E-11 44.999996 4 CGTTTTT 8355 0.0 44.542194 1 ACCACCG 305 0.0 43.52459 14 TACGGCT 835 0.0 42.57485 7 ACGGCTG 835 0.0 42.57485 8 CCGATGA 145 0.0 41.89655 18 ACCGGTG 70 0.0 41.785717 17 CGACCAC 540 0.0 41.666664 12 GCGATCT 65 0.0 41.53846 9 TTACACG 125 0.0 41.4 34 GCGACCA 560 0.0 41.38393 11 GATACCT 925 0.0 41.10811 5 >>END_MODULE