SRR2933370.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933370.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	272195
Sequences flagged as poor quality	0
Sequence length	51
%GC	37

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACCTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGCCG	8433	3.0981465493488125	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7769	2.8542037877257114	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGC	7429	2.729293337497015	No Hit
GAATCTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGCCGTCTTC	6288	2.310108561876596	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTAGGATCGT	2133	0.7836293833464979	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGCCGTC	1621	0.595528940649167	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTAGGATCGTCGTA	1486	0.5459321442348316	No Hit
GAACTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGCCGTCTTCT	1445	0.5308694134719594	No Hit
GAATGACTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGCCGTCT	1440	0.5290324950862433	No Hit
GCTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGCCGTCTTCTGC	1387	0.5095611601976524	No Hit
GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCTAGGATCGTCGT	661	0.2428406105916714	No Hit
GAATGATACGGCGCTGTCTCTTATACACATCTGACGCTAGGATCGTCGTAT	423	0.155403295431584	No Hit
GAATGATACGGCCTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATG	409	0.15025992395157883	No Hit
GAATGCTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGCCGTCTT	380	0.13960579731442532	No Hit
GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCTAGGATCG	294	0.10801080108010801	No Hit
GAATGATACGGCGACCACCCGTCTCTTATACACATCTGACGCTAGGATCGT	280	0.10286742960010287	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTTGATC	45	3.8198777E-10	45.000004	16
TCACGGG	25	3.882936E-5	45.0	3
ACACGAC	20	7.023789E-4	45.0	26
AGACACG	20	7.023789E-4	45.0	24
TCGTAGG	20	7.023789E-4	45.0	2
GACGAAT	20	7.023789E-4	45.0	20
AATACCC	20	7.023789E-4	45.0	39
CCACCGT	20	7.023789E-4	45.0	15
TTCTCCG	20	7.023789E-4	45.0	1
GCCCTAC	60	0.0	44.999996	26
CGAATAT	30	2.159377E-6	44.999996	14
CGTTTTT	6695	0.0	43.95818	1
GATACCT	975	0.0	42.692307	5
CACCGGT	90	0.0	42.500004	16
TACGGCT	880	0.0	42.44318	7
ACGGCTG	895	0.0	41.98324	8
CCGATGA	220	0.0	41.93182	18
TGATACC	1005	0.0	41.641792	4
CCCTACA	65	0.0	41.53846	27
ATACCTG	1010	0.0	41.21287	6