##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933369.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 183470 Sequences flagged as poor quality 0 Sequence length 51 %GC 36 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.471183299722025 31.0 28.0 31.0 16.0 33.0 2 28.71693464871641 31.0 30.0 33.0 16.0 34.0 3 28.880923311713087 31.0 30.0 33.0 16.0 34.0 4 31.904758271106992 35.0 30.0 37.0 19.0 37.0 5 33.59089769444596 35.0 33.0 37.0 28.0 37.0 6 32.565640159154086 35.0 33.0 37.0 17.0 37.0 7 31.985436311113535 35.0 31.0 35.0 25.0 37.0 8 32.72974328228048 35.0 32.0 35.0 26.0 37.0 9 32.797863410911866 35.0 31.0 37.0 25.0 39.0 10 31.853392925273887 35.0 28.0 39.0 15.0 39.0 11 32.50705837466616 35.0 30.0 39.0 17.0 39.0 12 33.33937428462419 35.0 31.0 39.0 25.0 39.0 13 33.45248269471848 35.0 32.0 39.0 25.0 39.0 14 33.47926636507331 36.0 31.0 40.0 19.0 41.0 15 34.12772660380444 36.0 32.0 40.0 25.0 41.0 16 34.26910121545757 37.0 32.0 40.0 25.0 41.0 17 32.10382623862212 35.0 27.0 39.0 18.0 41.0 18 32.923720499264185 36.0 30.0 39.0 22.0 39.0 19 32.76055485910503 36.0 30.0 37.0 20.0 39.0 20 32.450738540360824 34.0 30.0 37.0 24.0 39.0 21 32.83881288494032 35.0 31.0 37.0 24.0 39.0 22 33.10134081866245 35.0 31.0 38.0 25.0 39.0 23 34.080171145146345 35.0 33.0 38.0 27.0 40.0 24 32.39896440835014 35.0 31.0 37.0 21.0 39.0 25 31.427617594157084 35.0 29.0 37.0 18.0 39.0 26 30.79778165367635 33.0 25.0 37.0 19.0 39.0 27 32.487349430424594 35.0 30.0 38.0 22.0 39.0 28 32.48409004196871 35.0 31.0 38.0 21.0 39.0 29 32.76035864173979 35.0 31.0 38.0 22.0 40.0 30 31.561563198343052 35.0 29.0 38.0 18.0 40.0 31 32.00257262767755 35.0 30.0 37.0 21.0 40.0 32 31.94482476699188 35.0 30.0 38.0 19.0 40.0 33 31.911544121654767 35.0 30.0 38.0 16.0 40.0 34 31.11580094838393 35.0 30.0 38.0 12.0 40.0 35 30.59233117130866 35.0 28.0 38.0 10.0 40.0 36 30.045413419087588 35.0 25.0 38.0 8.0 40.0 37 30.142497411020877 35.0 26.0 38.0 8.0 40.0 38 30.07661743064261 35.0 25.0 38.0 8.0 40.0 39 29.66416852891481 35.0 24.0 38.0 8.0 40.0 40 29.409478388837414 34.0 23.0 38.0 8.0 40.0 41 28.88341418215512 34.0 22.0 38.0 7.0 40.0 42 29.259840845914862 34.0 23.0 38.0 7.0 40.0 43 29.20318308170273 34.0 23.0 38.0 7.0 40.0 44 29.11150596827819 34.0 22.0 38.0 7.0 40.0 45 29.32835885975909 35.0 23.0 38.0 7.0 40.0 46 28.984978470594648 34.0 22.0 38.0 7.0 40.0 47 28.977767482422195 34.0 22.0 38.0 7.0 40.0 48 28.775096746062026 34.0 22.0 38.0 7.0 40.0 49 28.592843516651225 34.0 22.0 37.0 7.0 40.0 50 28.677396849621193 34.0 22.0 37.0 7.0 40.0 51 27.006655038970948 32.0 20.0 36.0 7.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 5.0 10 15.0 11 11.0 12 14.0 13 44.0 14 42.0 15 114.0 16 219.0 17 373.0 18 621.0 19 1022.0 20 1591.0 21 2180.0 22 2872.0 23 4076.0 24 5444.0 25 7445.0 26 9220.0 27 9939.0 28 9945.0 29 10295.0 30 11170.0 31 12893.0 32 14818.0 33 16807.0 34 18696.0 35 20299.0 36 14365.0 37 7407.0 38 1493.0 39 33.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.508475500081758 2.5448302174742468 34.90815937210443 39.038534910339564 2 40.19294707581621 12.098980759797243 34.259006922112604 13.449065242273942 3 13.055540415326755 12.004142366599444 60.812666921022505 14.12765029705129 4 11.995421594811141 3.0631710906415215 68.19425519158445 16.747152122962884 5 19.164441053033194 3.4474300975636343 60.2632582983594 17.124870551043767 6 14.021910939118113 11.428026380334659 62.65656510601188 11.893497574535346 7 52.25758979669701 1.4427426827274215 43.081157682454894 3.2185098381206734 8 52.904562053741756 8.611762140949473 34.255191584455225 4.228484220853545 9 48.424810595737725 3.403826238622118 34.7893388564888 13.38202430915136 10 26.095274431787214 20.673679620646425 40.23927617594157 12.991769771624789 11 21.765411238894643 17.902654384913063 46.87414836213005 13.457786014062245 12 17.173379844116205 15.828745844007194 49.871368616122524 17.126505695754073 13 17.04856379789611 16.47353790810487 53.67308006758598 12.804818226413037 14 14.365291328282554 19.752003052270126 48.246579822314274 17.636125797133044 15 11.803564615468469 17.34834032811904 54.64163078432441 16.20646427208808 16 13.453425628168091 16.520957104703765 48.31689104485747 21.708726222270673 17 13.804436692647299 17.657382678367036 50.886248432986314 17.651932195999347 18 13.759742737232244 16.533493214149452 50.518340873167276 19.188423175451028 19 14.568049272360604 18.74093857306372 47.74350029977653 18.94751185479915 20 16.55638524009375 18.244944677603968 51.73870387529297 13.45996620700932 21 17.225159426609256 21.07810541232899 46.86815283152559 14.828582329536163 22 14.511909303973402 17.491688014389272 49.27890118275467 18.71750149888265 23 14.83621300485093 21.930015806398867 47.24151087371232 15.992260315037882 24 15.259170436583638 18.40900419687142 46.99078868479861 19.341036681746335 25 13.701967624134737 22.24232844606748 45.76606529677876 18.289638633019024 26 13.922712160026162 19.049435875074945 49.53234861285224 17.495503352046658 27 14.765356734070965 20.522156210824658 46.851256336185756 17.861230718918623 28 13.442524663432714 20.16841990516161 50.00436038589415 16.384695045511528 29 16.60652967787649 18.01602441816101 48.62266310568486 16.75478279827765 30 14.956668665176867 22.726876328555075 47.29601569738922 15.020439308878835 31 17.903199433149833 19.385730637161387 44.82531204011555 17.885757889573227 32 18.290183681255794 22.893661089006375 43.35804218673353 15.458113043004307 33 16.58145745898512 21.57791464544612 41.83572246143783 20.004905434130922 34 17.786014062244508 21.697825257535293 43.637106883959234 16.87905379626097 35 15.641794298795444 25.323486128522376 39.32305008993296 19.711669482749222 36 20.260533057175557 23.228320706382515 39.4206137243146 17.090532512127325 37 19.728020929852292 25.38671172398757 38.6253883468687 16.259878999291438 38 20.758162097345615 26.057121055213383 35.66632146945005 17.518395377990952 39 20.654602932359513 23.8202430915136 39.31541941461819 16.209734561508693 40 17.058919714394722 25.42868043821878 38.14847113969586 19.36392870769063 41 19.794516814738106 24.055158881561017 38.28200795770426 17.86831634599662 42 18.250395159971657 23.349866463181993 38.058538180628986 20.341200196217365 43 20.887338529459857 23.041369161170763 36.94663977762032 19.12465253174906 44 19.329590668774184 23.975036790755983 37.53910721098817 19.15626532948166 45 18.60903689976563 22.285387256772225 36.946094729383546 22.1594811140786 46 21.441652586253884 24.219218400828474 36.380334659617375 17.958794353300267 47 16.785305499536708 23.734670518340874 41.493432168746935 17.986591813375483 48 19.144274268272742 23.24140186406497 37.37722788466779 20.237095982994497 49 17.977325993350412 21.178394287894477 39.924783343325885 20.919496375429226 50 19.67678639559601 20.84482476699188 38.08470049599389 21.393688341418216 51 18.563252847877038 20.8497302011228 37.48351229083774 23.103504660162425 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 51.0 1 200.0 2 349.0 3 8585.0 4 16821.0 5 11278.5 6 5736.0 7 5454.0 8 5172.0 9 5150.0 10 5128.0 11 4826.5 12 4525.0 13 4180.0 14 3835.0 15 3634.5 16 3434.0 17 3200.0 18 2966.0 19 2776.5 20 2587.0 21 2440.5 22 2294.0 23 2258.5 24 2223.0 25 2131.0 26 2060.0 27 2081.0 28 2105.5 29 2130.0 30 2354.0 31 2578.0 32 2679.5 33 2781.0 34 3044.0 35 3307.0 36 3640.5 37 3974.0 38 4201.0 39 4428.0 40 4918.5 41 5409.0 42 6208.0 43 7007.0 44 7345.0 45 7683.0 46 13492.5 47 19302.0 48 16417.5 49 13533.0 50 12442.0 51 11351.0 52 9662.5 53 7974.0 54 7234.0 55 6494.0 56 6135.5 57 5777.0 58 5466.0 59 5155.0 60 4670.5 61 4186.0 62 3744.5 63 3303.0 64 2917.5 65 2532.0 66 2182.5 67 1833.0 68 1492.0 69 1151.0 70 1020.5 71 890.0 72 726.5 73 563.0 74 484.0 75 314.5 76 224.0 77 176.0 78 128.0 79 97.0 80 66.0 81 55.0 82 44.0 83 27.0 84 10.0 85 7.0 86 4.0 87 4.0 88 4.0 89 3.0 90 2.0 91 1.0 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 183470.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.57621568520439 #Duplication Level Percentage of deduplicated Percentage of total 1 80.575 43.97478578835344 2 8.38 9.146973748840255 3 4.085 6.688315232221798 4 2.513 5.4860012006767445 5 1.5150000000000001 4.134148338154232 6 0.958 3.137040877585548 7 0.5930000000000001 2.2654587130928343 8 0.363 1.5848933034983355 9 0.234 1.1493751023304044 >10 0.714 6.171478469682913 >50 0.033 1.2001309829176445 >100 0.027999999999999997 2.746275173279485 >500 0.005 1.8812421546689952 >1k 0.003 4.218741472466299 >5k 0.0 0.0 >10k+ 0.001 6.2151394422310755 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11388 6.207009320324849 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGCCG 3445 1.8776911756690469 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGC 2700 1.471630239276176 No Hit GAATCTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGCCGTCTTC 1585 0.8639014552787921 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTAGGATCGT 935 0.509620101378972 No Hit GCTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGCCGTCTTCTGC 789 0.43004305881070476 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGCC 631 0.34392543740121 No Hit GAACTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGCCGTCTTCT 562 0.30631710906415216 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTAGGATCGTCGTA 530 0.28887556548754567 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGCCGTC 470 0.2561726712814084 No Hit CTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGCCGTCTTCTGCT 367 0.20003270289420616 No Hit GAATGACTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGCCGTCT 351 0.1913119311059029 No Hit GAATGATACCTGTCTCTTCTACACATCTGACGCTAGGATCGTCGTATGCCG 286 0.15588379571592087 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGC 275 0.14988826511146236 No Hit CCTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGCCGTCTTCTGC 270 0.1471630239276176 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCTAGGATCGTCGT 213 0.11609527443178722 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 206 0.11227993677440454 No Hit GAATCTTTCTCTTATACACATCTGACGCTAGGATCGTCGTATGCCGTCTTC 203 0.11064479206409766 No Hit TCTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGCCGTCTTCTGC 190 0.10355916498610127 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.2507221889137189 0.0 2 0.0 0.0 0.0 1.1129884994822041 0.0 3 0.0 0.0 0.0 1.3795170872622227 0.0 4 0.0 0.0 0.0 2.0962555186133973 0.0 5 0.0 0.0 0.0 3.5389982013408186 0.0 6 0.0 0.0 0.0 3.8742028669537256 0.0 7 0.0 0.0 0.0 4.333133482313185 0.0 8 0.0 0.0 0.0 4.916880143892734 0.0 9 0.0 0.0 0.0 5.104921785578024 0.0 10 0.0 0.0 0.0 7.678094511364256 0.0 11 0.0 0.0 0.0 8.622118057448084 0.0 12 0.0 0.0 0.0 11.003978852128414 0.0 13 0.0 0.0 0.0 11.338093421267782 0.0 14 0.0 0.0 0.0 11.536490979451681 0.0 15 0.0 0.0 0.0 12.109336676295852 0.0 16 0.0 0.0 0.0 12.478334332588433 0.0 17 0.0 0.0 0.0 12.89747642666376 0.0 18 0.0 0.0 0.0 13.231590995803128 0.0 19 0.0 0.0 0.0 14.123289911157137 0.0 20 0.0 0.0 0.0 14.455769335586199 0.0 21 0.0 0.0 0.0 14.771352264675423 0.0 22 0.0 0.0 0.0 15.240638796533494 0.0 23 0.0 0.0 0.0 15.513707963154738 0.0 24 0.0 0.0 0.0 15.758434621464 0.0 25 0.0 0.0 0.0 15.980269253828963 0.0 26 0.0 0.0 0.0 16.166675750803947 0.0 27 0.0 0.0 0.0 16.36343816427754 0.0 28 0.0 0.0 0.0 16.55475009538344 0.0 29 0.0 0.0 0.0 16.741701640595192 0.0 30 0.0 0.0 0.0 16.937919005832015 0.0 31 0.0 0.0 0.0 17.115059682781926 0.0 32 0.0 0.0 0.0 17.29601569738922 0.0 33 0.0 0.0 0.0 17.4666157954979 0.0 34 0.0 0.0 0.0 17.65520248541996 0.0 35 0.0 0.0 0.0 17.83288821060664 0.0 36 0.0 0.0 0.0 18.016569466397776 0.0 37 0.0 0.0 0.0 18.177358696244617 0.0 38 0.0 0.0 0.0 18.346868697879763 0.0 39 0.0 0.0 0.0 18.53164005014444 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCCCGTC 25 3.8779548E-5 45.000004 17 GGTATGC 25 3.8779548E-5 45.000004 8 CTCGCGG 25 3.8779548E-5 45.000004 2 CTCTGCG 25 3.8779548E-5 45.000004 1 TCAAGCG 25 3.8779548E-5 45.000004 17 GCGAGAC 20 7.017777E-4 45.0 21 GACACGA 20 7.017777E-4 45.0 25 CATTGGG 20 7.017777E-4 45.0 3 CGTGAGG 20 7.017777E-4 45.0 45 TAAACGA 20 7.017777E-4 45.0 31 CGACCAA 20 7.017777E-4 45.0 29 CGATTGG 20 7.017777E-4 45.0 10 AAACGAC 20 7.017777E-4 45.0 32 GCCGATT 20 7.017777E-4 45.0 9 CGTAGGG 20 7.017777E-4 45.0 3 CTACGGC 20 7.017777E-4 45.0 6 ACGTGAG 20 7.017777E-4 45.0 44 AGACACG 20 7.017777E-4 45.0 24 CGTTTTT 5105 0.0 44.29481 1 TACGGCT 395 0.0 43.29114 7 >>END_MODULE