SRR2933368.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933368.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	532810
Sequences flagged as poor quality	0
Sequence length	51
%GC	39

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACCTGTCTCTTATACACATCTGACGCACCGATCATCGTATGCCG	19612	3.6808618456860795	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	17109	3.2110883804733397	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCACCGATCATCGTATGC	16423	3.082337043223663	No Hit
GAATCTGTCTCTTATACACATCTGACGCACCGATCATCGTATGCCGTCTTC	16233	3.046677051857135	No Hit
GAACTGTCTCTTATACACATCTGACGCACCGATCATCGTATGCCGTCTTCT	4213	0.7907133875114957	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCACCGATCATCGTATGCCGTC	3882	0.7285899288677014	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCACCGATCAT	3771	0.7077569865430453	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCACCGATCATCGTA	3378	0.6339971096638576	No Hit
GAATGACTGTCTCTTATACACATCTGACGCACCGATCATCGTATGCCGTCT	3159	0.5928942775098065	No Hit
GCTGTCTCTTATACACATCTGACGCACCGATCATCGTATGCCGTCTTCTGC	3068	0.5758150184868902	No Hit
GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCACCGATCATCGT	1283	0.24079878380661024	No Hit
GAATGCTGTCTCTTATACACATCTGACGCACCGATCATCGTATGCCGTCTT	1008	0.18918563840768754	No Hit
GAATGATACGGCCTGTCTCTTATACACATCTGACGCACCGATCATCGTATG	808	0.15164880539028922	No Hit
GAATGATACGGCGCTGTCTCTTATACACATCTGACGCACCGATCATCGTAT	713	0.13381880970702503	No Hit
GCGCGCGGGAGAAACAAGCGAGATAGGAATGTCTTACACGCGGGGCAAGAC	562	0.10547850077888929	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTAATCG	25	3.8879793E-5	45.0	20
GTTAGCG	20	7.029877E-4	45.0	1
AGGCGAG	25	3.8879793E-5	45.0	45
GACGAAT	25	3.8879793E-5	45.0	20
GGCCTAA	20	7.029877E-4	45.0	8
CCGTTTG	25	3.8879793E-5	45.0	1
AAGTGCG	20	7.029877E-4	45.0	12
CGTTTTT	12800	0.0	44.279297	1
CGATGAA	525	0.0	43.714287	19
ACGGCTG	1915	0.0	42.532635	8
CCGATGA	545	0.0	42.522934	18
TGATACC	2355	0.0	42.42038	4
GATACCT	2365	0.0	42.33615	5
ATACCTG	2405	0.0	41.819126	6
TACGGCT	1950	0.0	41.769234	7
CGGCTGT	1995	0.0	41.61654	9
GAATGAC	405	0.0	40.555553	1
TACCTGT	2475	0.0	40.545456	7
CGGTGAA	100	0.0	40.5	19
CACCGGT	150	0.0	40.5	16