##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933368.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 532810 Sequences flagged as poor quality 0 Sequence length 51 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.207993468591056 31.0 28.0 31.0 25.0 34.0 2 28.17974512490381 31.0 25.0 33.0 16.0 34.0 3 28.17995345432706 31.0 25.0 33.0 16.0 34.0 4 32.89888890974269 35.0 32.0 37.0 28.0 37.0 5 34.13851654435915 35.0 33.0 37.0 30.0 37.0 6 33.3115406993112 35.0 32.0 37.0 28.0 37.0 7 33.49761453426174 35.0 32.0 37.0 29.0 37.0 8 33.25739194084195 35.0 32.0 37.0 28.0 37.0 9 34.56840149396596 37.0 34.0 39.0 28.0 39.0 10 34.44527880482724 37.0 32.0 39.0 27.0 39.0 11 34.626981475572904 37.0 33.0 39.0 27.0 39.0 12 34.733856346540044 37.0 33.0 39.0 27.0 39.0 13 34.784711247912014 37.0 33.0 39.0 27.0 39.0 14 35.568684897055235 38.0 34.0 40.0 27.0 41.0 15 35.76932302321653 38.0 34.0 40.0 27.0 41.0 16 35.83611981757099 38.0 34.0 40.0 27.0 41.0 17 35.066183067134624 37.0 33.0 40.0 27.0 41.0 18 34.90340834443798 37.0 33.0 39.0 27.0 40.0 19 34.232433700568684 37.0 32.0 38.0 27.0 40.0 20 33.45963288977309 35.0 32.0 37.0 25.0 40.0 21 34.04527692798558 35.0 33.0 38.0 27.0 40.0 22 34.65446219102494 35.0 33.0 39.0 28.0 40.0 23 34.905882021733824 35.0 33.0 39.0 29.0 40.0 24 34.51051969745313 35.0 33.0 39.0 27.0 40.0 25 33.528227698429085 35.0 32.0 38.0 24.0 40.0 26 33.59941817908823 35.0 32.0 38.0 24.0 40.0 27 34.25351438599125 35.0 33.0 38.0 27.0 40.0 28 33.91178093504251 35.0 33.0 39.0 24.0 40.0 29 33.858110771194234 35.0 33.0 39.0 24.0 40.0 30 33.28140800660648 35.0 32.0 39.0 22.0 40.0 31 33.381734577053734 35.0 33.0 39.0 22.0 40.0 32 32.78535500459826 35.0 32.0 39.0 18.0 40.0 33 32.106593344719506 35.0 31.0 39.0 15.0 40.0 34 31.809220923030725 35.0 31.0 39.0 12.0 40.0 35 31.374416771456993 35.0 30.0 39.0 10.0 40.0 36 31.01447607965316 35.0 28.0 39.0 8.0 40.0 37 30.907347835063156 35.0 27.0 39.0 8.0 40.0 38 30.494367598205738 35.0 25.0 39.0 8.0 40.0 39 30.225575721176405 35.0 24.0 39.0 7.0 40.0 40 29.848015239954204 35.0 23.0 39.0 7.0 40.0 41 29.359002270978397 35.0 22.0 38.0 7.0 40.0 42 29.72614815787992 35.0 23.0 39.0 7.0 40.0 43 29.5674217826242 35.0 22.0 39.0 7.0 40.0 44 29.74606144779565 35.0 23.0 39.0 7.0 40.0 45 29.825190968637976 35.0 23.0 39.0 7.0 40.0 46 29.527968694281263 35.0 23.0 39.0 7.0 40.0 47 29.376368686773898 35.0 23.0 38.0 7.0 40.0 48 29.33563934610837 35.0 23.0 38.0 7.0 40.0 49 29.528207053170924 35.0 23.0 38.0 7.0 40.0 50 29.4590060246617 35.0 23.0 39.0 7.0 40.0 51 28.262857303729284 33.0 20.0 37.0 7.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 13.0 9 29.0 10 28.0 11 39.0 12 63.0 13 63.0 14 101.0 15 143.0 16 233.0 17 533.0 18 1059.0 19 1990.0 20 3184.0 21 4758.0 22 6782.0 23 9168.0 24 13468.0 25 19172.0 26 24398.0 27 26563.0 28 25386.0 29 24903.0 30 26285.0 31 30005.0 32 34446.0 33 40095.0 34 44439.0 35 51350.0 36 52993.0 37 49799.0 38 35959.0 39 5360.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.573731724254422 2.3548732193464836 29.87387624106154 36.197518815337546 2 35.346183442502955 20.85978116026351 30.431298211369906 13.36273718586363 3 12.08873707325313 21.198175709915354 53.88806516394212 12.825022052889398 4 10.703252566580957 2.7578311217882545 70.99941817908822 15.539498132542557 5 25.04344888421764 3.3569189767459315 54.85614008746082 16.743492051575608 6 13.042735684390308 18.169516337906572 57.761678647172545 11.026069330530582 7 50.195754584185735 1.366340721833299 45.73337587507742 2.7045288189035492 8 48.61076181002609 14.276759069837277 33.17111165330981 3.9413674668268235 9 45.912614252735494 2.728552392034684 32.21692535800755 19.141907997222273 10 31.41551397308609 16.768829413862353 38.10063624931965 13.715020363731911 11 27.14513616486177 14.47195060152775 44.23959760515005 14.143315628460426 12 19.447457817983896 13.723841519491002 46.884067491225764 19.944633171299337 13 18.441095324787447 15.051143934986206 54.83117809350425 11.676582646722096 14 15.497269195397983 21.781498095005723 45.8418573224977 16.87937538709859 15 11.45361385859875 14.17728646234117 57.42853925414313 16.94056042491695 16 14.565980368236332 17.080948180402018 44.39049567387999 23.962575777481653 17 15.210863159475235 18.189786227735965 50.36973780522137 16.229612807567424 18 15.98299581464312 15.43814868339558 48.36189260712074 20.216962894840563 19 14.820480096094293 19.1184474765864 44.87622229312513 21.18485013419418 20 17.324374542519845 18.615266229988176 51.44516807116983 12.615191156322142 21 16.623186501754848 24.8636474540643 45.52035434770369 12.992811696477169 22 14.912069968656743 13.714832679566824 50.21283384320865 21.16026350856778 23 15.295884086259642 22.961843809237813 47.8256789474672 13.91659315703534 24 16.88294138623524 17.418216625063344 45.02993562433137 20.668906364370038 25 14.04440607345958 27.787391377789454 42.17901315665997 15.989189392090989 26 14.871154820667781 15.656988419887014 48.0940673035416 21.377789455903606 27 18.1864079127644 18.198607383495055 43.2809068898857 20.334077813854844 28 11.56096920102851 20.673973836827386 48.736322516469286 19.028734445674818 29 18.23201516488054 19.690321127606463 43.21822037874664 18.85944332876635 30 14.608772357876166 21.861639233497872 45.67294157391941 17.856646834706556 31 19.694074810908205 16.039864116664475 41.17659203093035 23.08946904149697 32 23.78127287400762 21.42058144554344 39.38402057018449 15.414125110264449 33 16.292862371201743 20.397139693324075 37.93378502655731 25.376212908916873 34 19.10362042754453 23.421670013700943 41.20174170905201 16.27296784970252 35 16.20314934029016 22.426568570409714 35.93513635254594 25.43514573675419 36 17.39606989358308 29.204594508361332 32.61781873463336 20.781516863422233 37 20.942925245397046 21.028509224676714 36.7840318312344 21.244533698691843 38 19.337287213077833 26.556558623148963 30.653516262832902 23.4526379009403 39 23.769073403276966 22.205664308102325 36.27559542801374 17.749666860606972 40 19.82770593645014 24.207503612920178 33.90026463467277 22.06452581595691 41 18.058219628009986 27.339389275726806 34.279386648148495 20.323004448114713 42 19.708151123289728 20.67509994181791 38.057468891349636 21.559280043542724 43 21.007676282352058 25.292693455453165 31.72237758300332 21.977252679191455 44 22.402732681443666 20.734783506315573 34.348829789230685 22.51365402301008 45 18.696533473470843 19.731987012255775 34.28745706724723 27.284022447026146 46 24.90493797038344 24.153638257540212 31.114468572286558 19.826955199789793 47 15.653985473245621 22.465794560912897 42.564328747583566 19.315891218257917 48 20.20157279330343 24.355961787503986 32.857491413449445 22.584974005743135 49 18.77911450610912 19.73930669469417 38.841237964752914 22.640340834443798 50 19.307820799159174 21.273061691785063 35.480565304705245 23.93855220435052 51 18.931514048159755 20.45663557365665 33.24956363431617 27.36228674386742 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 52.0 1 772.0 2 1492.0 3 17690.0 4 33888.0 5 24479.5 6 15071.0 7 14254.5 8 13438.0 9 13054.5 10 12671.0 11 12032.0 12 11393.0 13 10621.0 14 9849.0 15 9201.0 16 8553.0 17 7796.5 18 7040.0 19 6486.0 20 5932.0 21 5685.0 22 5438.0 23 5179.0 24 4920.0 25 4968.0 26 5465.5 27 5915.0 28 6393.0 29 6871.0 30 7594.5 31 8318.0 32 8829.5 33 9341.0 34 9836.0 35 10331.0 36 10606.0 37 10881.0 38 11393.0 39 11905.0 40 12758.5 41 13612.0 42 14335.5 43 15059.0 44 17199.0 45 19339.0 46 56235.0 47 93131.0 48 63808.0 49 34485.0 50 31414.0 51 28343.0 52 25442.0 53 22541.0 54 22440.0 55 22339.0 56 21624.5 57 20910.0 58 19257.0 59 17604.0 60 15434.0 61 13264.0 62 11875.0 63 10486.0 64 8965.0 65 7444.0 66 6307.5 67 5171.0 68 4442.5 69 3714.0 70 3111.0 71 2508.0 72 2114.5 73 1721.0 74 1527.0 75 1038.5 76 744.0 77 565.0 78 386.0 79 278.0 80 170.0 81 135.5 82 101.0 83 80.5 84 60.0 85 38.0 86 16.0 87 12.0 88 8.0 89 5.0 90 2.0 91 2.5 92 3.0 93 2.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 532810.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.63971881318345 #Duplication Level Percentage of deduplicated Percentage of total 1 82.67522816700577 34.42573253689905 2 5.640936535131695 4.697740223317943 3 2.4166175883179517 3.0188183056965907 4 1.5946930912548143 2.6561028765270707 5 1.2764291517799213 2.6575075482533093 6 1.0706145068448543 2.6748052213400877 7 0.9315195452447642 2.7151748353083547 8 0.7850142355227164 2.615021762520966 9 0.6359644736370053 2.3833243671677207 >10 2.8268265140993165 17.633388120074095 >50 0.09226109567057021 2.6559259763760448 >100 0.04658728593256396 3.657627524352331 >500 0.0018269523895123126 0.49524033243622456 >1k 0.003653904779024625 4.519163125710279 >5k 0.0 0.0 >10k+ 0.0018269523895123126 13.194427244019952 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCACCGATCATCGTATGCCG 19612 3.6808618456860795 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 17109 3.2110883804733397 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCACCGATCATCGTATGC 16423 3.082337043223663 No Hit GAATCTGTCTCTTATACACATCTGACGCACCGATCATCGTATGCCGTCTTC 16233 3.046677051857135 No Hit GAACTGTCTCTTATACACATCTGACGCACCGATCATCGTATGCCGTCTTCT 4213 0.7907133875114957 No Hit GAATGATCTGTCTCTTATACACATCTGACGCACCGATCATCGTATGCCGTC 3882 0.7285899288677014 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCACCGATCAT 3771 0.7077569865430453 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCACCGATCATCGTA 3378 0.6339971096638576 No Hit GAATGACTGTCTCTTATACACATCTGACGCACCGATCATCGTATGCCGTCT 3159 0.5928942775098065 No Hit GCTGTCTCTTATACACATCTGACGCACCGATCATCGTATGCCGTCTTCTGC 3068 0.5758150184868902 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCACCGATCATCGT 1283 0.24079878380661024 No Hit GAATGCTGTCTCTTATACACATCTGACGCACCGATCATCGTATGCCGTCTT 1008 0.18918563840768754 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCACCGATCATCGTATG 808 0.15164880539028922 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCACCGATCATCGTAT 713 0.13381880970702503 No Hit GCGCGCGGGAGAAACAAGCGAGATAGGAATGTCTTACACGCGGGGCAAGAC 562 0.10547850077888929 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.09571892419436571 0.0 2 0.0 0.0 0.0 0.78358138923819 0.0 3 0.0 0.0 0.0 0.8761096826260768 0.0 4 0.0 0.0 0.0 1.8237270321502974 0.0 5 0.0 0.0 0.0 5.386535537996659 0.0 6 0.0 0.0 0.0 5.6855164129802365 0.0 7 0.0 0.0 0.0 6.437379178318725 0.0 8 0.0 0.0 0.0 7.354028640603592 0.0 9 0.0 0.0 0.0 7.47583566374505 0.0 10 0.0 0.0 0.0 11.83048366209343 0.0 11 0.0 0.0 0.0 12.052326345226254 0.0 12 0.0 0.0 0.0 15.830783956757568 0.0 13 0.0 0.0 0.0 16.12845104258554 0.0 14 0.0 0.0 0.0 16.335654360841577 0.0 15 0.0 0.0 0.0 17.156772583097165 0.0 16 0.0 0.0 0.0 17.523507441677147 0.0 17 0.0 0.0 0.0 17.69167245359509 0.0 18 0.0 0.0 0.0 17.823051369155984 0.0 19 0.0 0.0 0.0 18.81083313000882 0.0 20 0.0 0.0 0.0 19.011467502486816 0.0 21 0.0 0.0 0.0 19.16161483455641 0.0 22 0.0 0.0 0.0 19.461158762035247 0.0 23 0.0 0.0 0.0 19.5974174658884 0.0 24 0.0 0.0 0.0 19.722039751506166 0.0 25 0.0 0.0 0.0 19.825078358138924 0.0 26 0.0 0.0 0.0 19.97635179519904 0.0 27 0.0 0.0 0.0 20.188997954242602 0.0 28 0.0 0.0 0.0 20.299356243313753 0.0 29 0.0 0.0 0.0 20.439556314633734 0.0 30 0.0 0.0 0.0 20.597211013306808 0.0 31 0.0 0.0 0.0 20.733469717159963 0.0 32 0.0 0.0 0.0 20.891687468328296 0.0 33 0.0 0.0 0.0 21.02269101555902 0.0 34 0.0 0.0 0.0 21.230832754640492 0.0 35 0.0 0.0 0.0 21.415138604755917 0.0 36 0.0 0.0 0.0 21.564535200165164 0.0 37 0.0 0.0 0.0 21.728383476286105 0.0 38 0.0 0.0 0.0 21.93539911037706 0.0 39 0.0 0.0 0.0 22.292186708207428 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTAATCG 25 3.8879793E-5 45.0 20 GTTAGCG 20 7.029877E-4 45.0 1 AGGCGAG 25 3.8879793E-5 45.0 45 GACGAAT 25 3.8879793E-5 45.0 20 GGCCTAA 20 7.029877E-4 45.0 8 CCGTTTG 25 3.8879793E-5 45.0 1 AAGTGCG 20 7.029877E-4 45.0 12 CGTTTTT 12800 0.0 44.279297 1 CGATGAA 525 0.0 43.714287 19 ACGGCTG 1915 0.0 42.532635 8 CCGATGA 545 0.0 42.522934 18 TGATACC 2355 0.0 42.42038 4 GATACCT 2365 0.0 42.33615 5 ATACCTG 2405 0.0 41.819126 6 TACGGCT 1950 0.0 41.769234 7 CGGCTGT 1995 0.0 41.61654 9 GAATGAC 405 0.0 40.555553 1 TACCTGT 2475 0.0 40.545456 7 CGGTGAA 100 0.0 40.5 19 CACCGGT 150 0.0 40.5 16 >>END_MODULE