SRR2933367.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933367.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	340784
Sequences flagged as poor quality	0
Sequence length	51
%GC	37

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	24297	7.129736137846847	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCACCGATCATCGTATGCCG	9016	2.6456641156861824	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCACCGATCATCGTATGC	6320	1.854547161838584	No Hit
GAATCTGTCTCTTATACACATCTGACGCACCGATCATCGTATGCCGTCTTC	4781	1.4029414526503592	No Hit
GAACTGTCTCTTATACACATCTGACGCACCGATCATCGTATGCCGTCTTCT	1666	0.4888727170289685	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCACCGATCAT	1650	0.48417766092304804	No Hit
GCTGTCTCTTATACACATCTGACGCACCGATCATCGTATGCCGTCTTCTGC	1403	0.4116977322879008	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCACCGATCATCGTATGCCGTC	1164	0.34156533170571385	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCACCGATCATCGTA	1028	0.30165735480538997	No Hit
GAATGACTGTCTCTTATACACATCTGACGCACCGATCATCGTATGCCGTCT	804	0.2359265693225034	No Hit
GAATGATACCTGTCTCTTCTACACATCTGACGCACCGATCATCGTATGCCG	662	0.19425794638245927	No Hit
GAATCTTTCTCTTATACACATCTGACGCACCGATCATCGTATGCCGTCTTC	424	0.12441898680689235	No Hit
GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCACCGATCATCGT	407	0.11943048969435185	No Hit
GAATGACTCTCTCTTATACACATCTGACGCACCGATCATCGTATGCCGTCT	368	0.10798629043617071	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TACGGGA	25	3.8850092E-5	45.000004	4
TCGGAAT	25	3.8850092E-5	45.000004	24
TCTCACG	20	7.026293E-4	45.000004	28
GTTATAC	25	3.8850092E-5	45.000004	33
TAGTGGG	30	2.1609903E-6	44.999996	3
CGTTTTT	9355	0.0	44.326565	1
TCAAGCG	120	0.0	43.124996	17
CACGACC	110	0.0	42.954544	27
ACGACCA	110	0.0	42.954544	28
AATGACT	105	0.0	42.857143	2
ACCGGTG	90	0.0	42.5	17
TACGGCT	1035	0.0	42.3913	7
GATACCT	1165	0.0	42.29614	5
GAATGAT	3450	0.0	42.130432	1
CGATGAA	150	0.0	42.0	19
TGATACC	1180	0.0	41.758472	4
ACGGCTG	1055	0.0	41.587677	8
AATGATA	3315	0.0	41.47059	2
CACCGGT	125	0.0	41.399998	16
ATACGGC	2180	0.0	41.181194	6