##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933366.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 366007 Sequences flagged as poor quality 0 Sequence length 51 %GC 37 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.015879477714908 31.0 28.0 31.0 25.0 34.0 2 27.71807643023221 31.0 25.0 33.0 16.0 34.0 3 27.689385722130996 31.0 25.0 33.0 16.0 34.0 4 32.749037586712824 35.0 32.0 37.0 28.0 37.0 5 34.12858224023038 35.0 33.0 37.0 30.0 37.0 6 33.05197168360168 35.0 32.0 37.0 28.0 37.0 7 33.648034053993506 35.0 33.0 37.0 29.0 37.0 8 33.0743701623193 35.0 32.0 37.0 27.0 37.0 9 34.72270748920103 37.0 34.0 39.0 28.0 39.0 10 34.688923982328205 37.0 33.0 39.0 28.0 39.0 11 35.056310398435 37.0 34.0 39.0 28.0 39.0 12 35.13364771712016 37.0 34.0 39.0 29.0 39.0 13 35.15577844139593 37.0 34.0 39.0 29.0 39.0 14 35.98841005773114 38.0 34.0 40.0 29.0 41.0 15 36.08127166966752 38.0 34.0 40.0 27.0 41.0 16 36.20222017611685 38.0 34.0 40.0 30.0 41.0 17 35.32090096637496 37.0 33.0 40.0 27.0 41.0 18 35.11209075236266 37.0 33.0 39.0 27.0 40.0 19 34.45586559819894 37.0 33.0 37.0 27.0 40.0 20 33.31269620526383 35.0 32.0 37.0 25.0 39.0 21 34.096566459111436 35.0 33.0 38.0 27.0 40.0 22 34.610791596882024 35.0 33.0 39.0 28.0 40.0 23 34.71918843082236 35.0 33.0 39.0 28.0 40.0 24 34.413150568158535 35.0 33.0 38.0 27.0 40.0 25 33.500304638982314 35.0 33.0 38.0 24.0 40.0 26 33.38946796099528 35.0 32.0 38.0 24.0 40.0 27 34.057936050403406 35.0 33.0 38.0 25.0 40.0 28 33.55140475455387 35.0 33.0 38.0 24.0 40.0 29 33.45134382675741 35.0 33.0 38.0 23.0 40.0 30 32.95349542495089 35.0 32.0 38.0 21.0 40.0 31 33.13045652132336 35.0 33.0 38.0 21.0 40.0 32 32.42039633121771 35.0 31.0 38.0 17.0 40.0 33 31.59466622223072 35.0 30.0 39.0 12.0 40.0 34 30.943818014409562 35.0 28.0 39.0 10.0 40.0 35 30.561169595117033 35.0 25.0 39.0 8.0 40.0 36 30.059302144494506 35.0 23.0 39.0 7.0 40.0 37 29.938195171130605 35.0 23.0 39.0 7.0 40.0 38 29.693880171690704 35.0 22.0 39.0 7.0 40.0 39 29.34528301371285 35.0 21.0 38.0 7.0 40.0 40 28.961754829825658 35.0 21.0 38.0 7.0 40.0 41 28.713822413232535 35.0 20.0 38.0 7.0 40.0 42 28.908370604933786 35.0 19.0 39.0 7.0 40.0 43 28.73924269207966 35.0 18.0 39.0 7.0 40.0 44 28.894193280456385 35.0 18.0 39.0 7.0 40.0 45 28.98973790118768 35.0 20.0 39.0 7.0 40.0 46 28.7021204512482 35.0 18.0 39.0 7.0 40.0 47 28.463941946465503 34.0 18.0 38.0 7.0 40.0 48 28.434759444491498 34.0 18.0 38.0 7.0 40.0 49 28.59824265656121 35.0 18.0 39.0 7.0 40.0 50 28.50129369110427 34.0 18.0 39.0 7.0 40.0 51 27.326236929894783 33.0 18.0 37.0 7.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 5.0 9 22.0 10 23.0 11 12.0 12 25.0 13 45.0 14 46.0 15 97.0 16 188.0 17 413.0 18 866.0 19 1530.0 20 2512.0 21 3702.0 22 5321.0 23 7321.0 24 10223.0 25 14649.0 26 19178.0 27 20570.0 28 19076.0 29 17565.0 30 17984.0 31 19878.0 32 22747.0 33 26198.0 34 29688.0 35 33533.0 36 34790.0 37 31629.0 38 22973.0 39 3198.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.275573964432375 2.1166261847451002 24.61783517801572 38.989964672806806 2 36.905031870975144 25.586122669785006 26.592660796104994 10.916184663134858 3 9.947350733729136 25.78502596944867 53.33805091159459 10.929572385227605 4 9.24763734026945 2.3570587447781053 75.16577551795457 13.229528396997873 5 27.00658730570727 2.8384703024805535 54.17983809052832 15.975104301283855 6 11.154158253803889 21.724174674254865 58.13358760898015 8.98807946296109 7 42.722680167319204 1.1939662356184444 53.051717590100736 3.0316360069616155 8 40.19841150579087 17.757037433710284 37.84709035619537 4.19746070430347 9 37.82113456846454 2.5004986243432503 36.020349337580974 23.658017469611238 10 29.68686391243883 14.063392230203247 42.392905053728484 13.85683880362944 11 25.148972560634085 12.748390058113642 47.96274388194761 14.139893499304659 12 17.08464592207253 11.276560284366147 50.266524957172955 21.372268836388375 13 17.08683167261828 12.851393552582326 59.257883045952674 10.803891728846716 14 14.194537262948522 22.544104347731054 46.422882622463504 16.838475766856916 15 9.494353933121499 13.284172160641736 61.60210050627447 15.619373399962297 16 10.803618510028496 15.906526377910804 46.972052447084344 26.31780266497635 17 11.19022313780884 17.146939812626535 55.02299136355315 16.63984568601147 18 11.03312231733273 15.787949410803618 51.94217596931207 21.23675230255159 19 11.717808675790353 18.462215203534356 48.42503012237471 21.394945998300578 20 14.875671776769298 17.0078714341529 56.18198559043953 11.934471198638278 21 14.503547746354577 24.889687902143947 47.897991022029636 12.708773329471839 22 11.952230421822534 13.412038567568379 53.15608717866051 21.479643831948568 23 13.537992442767488 23.187534664637564 49.69221900127593 13.582253891319018 24 15.953520014644528 16.04586797520266 46.33818478881551 21.662427221337296 25 10.808809667574664 28.659834374752396 45.10323573046417 15.428120227208769 26 12.01015281128503 14.82130123194365 52.275776146357856 20.892769810413462 27 16.79776616294224 19.52831503222616 44.959522632080805 18.714396172750796 28 10.28942069413973 19.02777815724836 53.16728915020751 17.515511998404403 29 17.260872059823992 18.510301715540958 46.37506932927513 17.853756895359922 30 11.591035144136587 26.20223110486958 48.64633736513236 13.560396385861473 31 16.97481195714836 15.671011756605749 42.61749092230476 24.736685363941127 32 23.360482176570393 22.4372757898073 41.05030778099872 13.151934252623585 33 14.75381618384348 16.63957246719325 43.70271606827192 24.90389528069135 34 19.91874472346157 23.04710019207283 41.80985609564844 15.224298988817154 35 19.846888174269893 23.856374331638467 37.600920200979765 18.69581729311188 36 19.0835147961651 23.821129104088172 35.94330163084313 21.1520544689036 37 20.311086946424524 24.64187843401902 40.01344236585639 15.033592253700064 38 18.06167641602483 20.502066900359832 37.340542667216745 24.095714016398592 39 23.614575677514367 21.320630479744924 39.532304026972156 15.532489815768551 40 20.322835355607953 21.404508656938255 41.816686566103925 16.455969421349863 41 21.263254527918864 23.26922709128514 37.78780187264178 17.67971650815422 42 21.512703308953107 20.423106661894444 41.04211121645214 17.022078812700304 43 24.490788427543738 21.034570377069294 33.350728264759965 21.123912930627007 44 19.91328034709719 21.945208698194296 37.05229681399536 21.089214140713157 45 16.54749772545334 19.816834104265766 36.33263844680566 27.303029723475237 46 26.980904736794653 23.76238705817102 31.92999041001948 17.326717795014847 47 14.592343862275857 19.83131470163139 47.28762018212767 18.288721253965086 48 19.67421388115528 22.814864196586406 34.047163032401016 23.463758889857296 49 17.818511667809634 18.156483345946935 42.82049250424172 21.20451248200171 50 20.927195381509097 17.984901928105202 38.069217255407686 23.01868543497802 51 18.532159220998505 19.247992524733135 35.44057900531957 26.77926924894879 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 25.0 1 569.5 2 1114.0 3 12853.5 4 24593.0 5 18603.5 6 12614.0 7 12229.0 8 11844.0 9 11669.5 10 11495.0 11 10924.0 12 10353.0 13 9558.5 14 8764.0 15 8013.5 16 7263.0 17 6689.0 18 6115.0 19 5569.0 20 5023.0 21 4722.5 22 4422.0 23 4170.5 24 3919.0 25 3804.0 26 3648.5 27 3608.0 28 3678.5 29 3749.0 30 3753.0 31 3757.0 32 4156.0 33 4555.0 34 4894.0 35 5233.0 36 5635.5 37 6038.0 38 6617.5 39 7197.0 40 7904.0 41 8611.0 42 9414.0 43 10217.0 44 11961.0 45 13705.0 46 45590.0 47 77475.0 48 51368.0 49 25261.0 50 22226.5 51 19192.0 52 16074.0 53 12956.0 54 11772.5 55 10589.0 56 10209.5 57 9830.0 58 9011.5 59 8193.0 60 7550.0 61 6907.0 62 6243.5 63 5580.0 64 4889.5 65 4199.0 66 3364.0 67 2529.0 68 2192.0 69 1855.0 70 1546.0 71 1237.0 72 1087.0 73 937.0 74 764.0 75 485.5 76 380.0 77 282.5 78 185.0 79 153.0 80 121.0 81 87.5 82 54.0 83 37.0 84 20.0 85 12.5 86 5.0 87 5.5 88 6.0 89 3.0 90 0.0 91 1.0 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 366007.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.29560578508441 #Duplication Level Percentage of deduplicated Percentage of total 1 85.43700078579928 37.84483706267712 2 4.939310182218657 4.375794733636221 3 2.1052640309450945 2.79761836764785 4 1.3625323355168466 2.4141678081393843 5 1.0580488161922348 2.3433456631713234 6 0.9190121282851859 2.442491936773921 7 0.7416973792145911 2.299775430506386 8 0.611636225340872 2.167423769726106 9 0.5041765323224715 2.0099524429662363 >10 2.2155586913705108 14.949384765033605 >50 0.06096919702259664 1.8193680553996776 >100 0.036083810482761276 3.0523054501070632 >500 0.0018664039904876522 0.6407195893372085 >1k 0.004354942644471189 5.196855920740249 >5k 0.0 0.0 >10k+ 0.0024885386539835364 15.64595900413764 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGCCG 16222 4.432155669153868 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGC 15365 4.198007141939908 No Hit GAATCTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGCCGTCTTC 14017 3.8297081749802597 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11171 3.0521274183280647 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAACGTTGGT 3446 0.9415120475837894 No Hit GAACTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGCCGTCTTCT 3138 0.8573606515722377 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGCCGTC 2944 0.8043562008376889 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAACGTTGGTCGTA 2943 0.8040829820194696 No Hit GAATGACTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGCCGTCT 2685 0.7335925269188841 No Hit GCTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGCCGTCTTCTGC 2516 0.6874185466398184 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCAACGTTGGTCGT 1186 0.3240375184081179 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCAACGTTGGTCGTAT 804 0.21966792984833622 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATG 764 0.2087391771195633 No Hit GAATGCTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGCCGTCTT 757 0.20682664539202802 No Hit CTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGCCGTCTTCTGCT 445 0.12158237410759903 Illumina Single End Adapter 2 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 406 0.11092684019704542 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCAACGTTGG 397 0.1084678708330715 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.12868606338130145 0.0 2 0.0 0.0 0.0 0.9587248331316067 0.0 3 0.0 0.0 0.0 1.0854983647853729 0.0 4 0.0 0.0 0.0 2.137937252566208 0.0 5 0.0 0.0 0.0 6.618179433726677 0.0 6 0.0 0.0 0.0 6.9602493941372705 0.0 7 0.0 0.0 0.0 7.8809968115363915 0.0 8 0.0 0.0 0.0 8.89982978467625 0.0 9 0.0 0.0 0.0 9.051466228787975 0.0 10 0.0 0.0 0.0 14.330873453239965 0.0 11 0.0 0.0 0.0 14.644801875373968 0.0 12 0.0 0.0 0.0 19.727491550708045 0.0 13 0.0 0.0 0.0 20.1171015854888 0.0 14 0.0 0.0 0.0 20.43758725926007 0.0 15 0.0 0.0 0.0 21.491392241132 0.0 16 0.0 0.0 0.0 22.003131087656794 0.0 17 0.0 0.0 0.0 22.225257986869103 0.0 18 2.7321881821932366E-4 0.0 0.0 22.385910651982066 0.0 19 2.7321881821932366E-4 0.0 0.0 23.72905436234826 0.0 20 2.7321881821932366E-4 0.0 0.0 23.99134442783881 0.0 21 2.7321881821932366E-4 0.0 0.0 24.151997092951774 0.0 22 2.7321881821932366E-4 0.0 0.0 24.528492624458003 0.0 23 2.7321881821932366E-4 0.0 0.0 24.673298598114243 0.0 24 2.7321881821932366E-4 0.0 0.0 24.822749291680214 0.0 25 2.7321881821932366E-4 0.0 0.0 24.927392099058213 0.0 26 2.7321881821932366E-4 0.0 0.0 25.105530768537214 0.0 27 2.7321881821932366E-4 0.0 0.0 25.33831320166008 0.0 28 2.7321881821932366E-4 0.0 0.0 25.45798304404014 0.0 29 2.7321881821932366E-4 0.0 0.0 25.60005682951419 0.0 30 2.7321881821932366E-4 0.0 0.0 25.7344804880781 0.0 31 2.7321881821932366E-4 0.0 0.0 25.879559680552557 0.0 32 2.7321881821932366E-4 0.0 0.0 26.042124877393054 0.0 33 2.7321881821932366E-4 0.0 0.0 26.177914630048058 0.0 34 2.7321881821932366E-4 0.0 0.0 26.392391402350228 0.0 35 2.7321881821932366E-4 0.0 0.0 26.551677973372094 0.0 36 2.7321881821932366E-4 0.0 0.0 26.684462319026686 0.0 37 2.7321881821932366E-4 0.0 0.0 26.848666828776498 0.0 38 2.7321881821932366E-4 0.0 0.0 27.007133743343708 0.0 39 2.7321881821932366E-4 0.0 0.0 27.168332846093108 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGAGAC 20 7.026978E-4 45.000004 21 CTTCGTG 20 7.026978E-4 45.000004 1 CGACGAA 30 2.1614323E-6 45.000004 19 TAGTTGC 20 7.026978E-4 45.000004 14 TTATACG 20 7.026978E-4 45.000004 26 ACAGGCG 20 7.026978E-4 45.000004 33 TAGATTC 20 7.026978E-4 45.000004 19 CGGTAGC 20 7.026978E-4 45.000004 33 GATTCGC 20 7.026978E-4 45.000004 11 CCAGTAG 30 2.1614323E-6 45.000004 26 CGATCCA 20 7.026978E-4 45.000004 34 CGTCATA 20 7.026978E-4 45.000004 38 ACATTGA 25 3.8855786E-5 45.0 38 ACCGACG 25 3.8855786E-5 45.0 17 CAACCCG 25 3.8855786E-5 45.0 23 CGTTTTT 9970 0.0 44.435806 1 ACGGCTG 1815 0.0 43.76033 8 TACGGCT 1815 0.0 43.512398 7 CGATGAA 485 0.0 43.144333 19 GATACCT 1965 0.0 43.053432 5 >>END_MODULE