##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933364.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 617430 Sequences flagged as poor quality 0 Sequence length 51 %GC 37 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.155199779732115 31.0 28.0 31.0 25.0 34.0 2 27.986753154203715 31.0 25.0 33.0 16.0 34.0 3 27.97461412629772 31.0 25.0 33.0 16.0 34.0 4 32.86498874366325 35.0 32.0 37.0 28.0 37.0 5 34.16902320910872 35.0 33.0 37.0 30.0 37.0 6 33.23918500882691 35.0 32.0 37.0 28.0 37.0 7 33.65711740602173 35.0 33.0 37.0 29.0 37.0 8 33.21066355700241 35.0 32.0 37.0 28.0 37.0 9 34.7134768313817 37.0 34.0 39.0 28.0 39.0 10 34.640087135383766 37.0 33.0 39.0 28.0 39.0 11 34.93512786874626 37.0 34.0 39.0 28.0 39.0 12 35.01182320263026 37.0 34.0 39.0 27.0 39.0 13 35.00468555139854 37.0 34.0 39.0 27.0 39.0 14 35.87443920768346 38.0 34.0 40.0 27.0 41.0 15 35.99346970506778 38.0 34.0 40.0 27.0 41.0 16 36.09776816805144 38.0 34.0 40.0 30.0 41.0 17 35.28876471826766 37.0 33.0 40.0 27.0 41.0 18 35.098388481285326 37.0 33.0 39.0 27.0 40.0 19 34.46319744748393 37.0 33.0 37.0 27.0 40.0 20 33.345467502388935 35.0 32.0 37.0 25.0 39.0 21 34.070683316327354 35.0 33.0 38.0 27.0 40.0 22 34.57600213789417 35.0 33.0 38.0 28.0 40.0 23 34.75446609332232 35.0 33.0 39.0 29.0 40.0 24 34.40943102861863 35.0 33.0 38.0 27.0 40.0 25 33.54106538393016 35.0 33.0 38.0 24.0 40.0 26 33.41936737767844 35.0 32.0 38.0 24.0 40.0 27 34.16097047438576 35.0 33.0 38.0 26.0 40.0 28 33.69632346986703 35.0 33.0 38.0 24.0 40.0 29 33.749548936721574 35.0 33.0 39.0 24.0 40.0 30 33.156513288955836 35.0 32.0 38.0 21.0 40.0 31 33.06180133780347 35.0 32.0 38.0 21.0 40.0 32 32.448815250311775 35.0 31.0 38.0 18.0 40.0 33 31.742489027096187 35.0 30.0 39.0 12.0 40.0 34 31.20203747793272 35.0 29.0 39.0 10.0 40.0 35 30.738052896684643 35.0 26.0 39.0 8.0 40.0 36 30.188670780493336 35.0 23.0 39.0 7.0 40.0 37 30.093354712275076 35.0 23.0 39.0 7.0 40.0 38 29.809615664933677 35.0 22.0 39.0 7.0 40.0 39 29.34610401179081 35.0 21.0 39.0 7.0 40.0 40 29.21364365191196 35.0 21.0 39.0 7.0 40.0 41 28.619398150397615 34.0 18.0 39.0 7.0 40.0 42 28.842903648996646 35.0 18.0 39.0 7.0 40.0 43 28.77571384610401 35.0 18.0 39.0 7.0 40.0 44 28.944189624734786 35.0 18.0 39.0 7.0 40.0 45 29.01354323567044 35.0 20.0 39.0 7.0 40.0 46 28.666232609364624 35.0 20.0 39.0 7.0 40.0 47 28.608151531347684 35.0 20.0 38.0 7.0 40.0 48 28.465419561731693 34.0 20.0 38.0 7.0 40.0 49 28.690444260887872 35.0 20.0 39.0 7.0 40.0 50 28.701328085774907 35.0 20.0 39.0 7.0 40.0 51 27.260321008049495 33.0 18.0 37.0 7.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 12.0 9 20.0 10 29.0 11 35.0 12 53.0 13 71.0 14 113.0 15 180.0 16 312.0 17 613.0 18 1318.0 19 2308.0 20 3855.0 21 5768.0 22 8396.0 23 12073.0 24 17002.0 25 24816.0 26 32083.0 27 34502.0 28 32006.0 29 29857.0 30 30599.0 31 34192.0 32 38941.0 33 45362.0 34 49757.0 35 56523.0 36 57194.0 37 53815.0 38 39739.0 39 5886.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.89851481139562 2.1059877233046658 26.38825453897608 39.607242926323636 2 38.066015580713604 22.70038708841488 27.46222243817113 11.771374892700386 3 10.502405130946018 22.922598513191776 55.00574963963526 11.56924671622694 4 9.797709861846688 2.3698232998072655 74.26671849440423 13.565748343941825 5 25.51949208817194 2.8571659945256953 55.55139853910565 16.071943378196718 6 11.55094504640202 19.717700791992616 59.355554475811026 9.375799685794341 7 44.99603193884327 1.147174578494728 51.0373645595452 2.8194289231167904 8 42.65438997133278 15.649223393745041 37.704841034611206 3.9915456003109666 9 40.37413148049171 2.4469170594237406 36.27925432842589 20.899697131658648 10 30.0009717700792 13.99559464230763 42.64370050046159 13.359733087151579 11 25.41486484297815 13.202468296001166 48.313978912589285 13.068687948431402 12 18.697018285473657 11.341852517694313 50.2095784137473 19.751550783084724 13 17.436956416111947 12.896846606092998 58.641789352639165 11.024407625155888 14 14.754870997521985 20.807055050774988 47.696095103898415 16.74197884780461 15 10.418185057415416 12.957906159402684 61.56228236399268 15.061626419189219 16 12.47137327308359 15.835965210631164 47.297345448066984 24.39531606821826 17 13.462740715546701 16.709424550151432 54.36340961728455 15.464425117017313 18 13.10140420776444 15.421343310172814 52.20608004146219 19.271172440600555 19 12.988354955217595 18.494890109000213 48.49165087540288 20.025104060379313 20 15.429279432486274 17.29345836775019 55.8309443985553 11.446317801208234 21 15.227151256012828 23.829098035404822 48.52760636833325 12.416144340249097 22 12.419545535526295 13.054921205642744 53.4167435984646 21.108789660366355 23 13.782938956642859 22.430396968077353 50.8384756166691 12.948188458610693 24 16.038417310464347 16.127496234390943 47.45833535785433 20.375751097290383 25 12.375168035242861 26.822149879338546 45.31461056314076 15.48807152227783 26 12.604667735613754 14.00158722446269 53.03078891534263 20.362956124580926 27 16.33901818829665 17.771893170075963 47.30625334045965 18.582835301167744 28 10.60120175566461 18.304423173477154 53.954942260661134 17.139432810197107 29 17.288599517354193 13.985553018155905 51.3172343423546 17.408613122135304 30 12.849715757251834 21.266216413196638 52.83319566590544 13.050872163646082 31 17.384156908475454 17.893526391655733 45.531963137521664 19.19035356234715 32 22.79983155985294 19.88338759049609 43.163435531153326 14.153345318497642 33 14.828077676821664 16.30209092528708 41.227345610028664 27.64248578786259 34 18.523881249696323 18.69313120515686 47.86340151920056 14.919586025946261 35 14.725070048426542 19.19780379962101 42.61114620280841 23.465979949144035 36 15.582009296600424 23.868940608651993 39.85828353011677 20.69076656463081 37 19.72174983398928 19.99773253648187 44.453622272970215 15.826895356558637 38 17.4952626208639 24.407301232528383 33.86035663961906 24.237079506988646 39 22.65876293668918 19.922906240383526 40.61853165541033 16.799799167516966 40 16.87090034497838 19.23424517759098 38.343132014965256 25.55172246246538 41 16.74327454124354 23.04196427125342 37.719255624119334 22.495505563383702 42 16.77113195018059 20.556500332021443 41.21179728876148 21.46057042903649 43 18.852663459825404 19.35344897397276 35.28221822716745 26.511669339034384 44 20.206987026869445 19.770014414589507 38.727791004648296 21.295207553892748 45 15.992096270022513 20.686231637594545 36.97909074712923 26.342581345253713 46 24.26963380464182 22.907860000323925 33.48379573392935 19.338710461104903 47 14.151077854979514 19.514438883760103 46.29042968433669 20.0440535769237 48 19.068720340767374 23.26223215587192 34.9116499036328 22.757397599727906 49 16.700840581118506 18.809419691301038 42.06290591646017 22.42683381112029 50 18.53230325704938 18.250651895761465 38.14926388416501 25.06778096302415 51 18.138736374973682 18.925384254085483 36.58924898369046 26.346630387250375 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 68.0 1 1019.5 2 1971.0 3 23918.0 4 45865.0 5 33606.0 6 21347.0 7 20344.0 8 19341.0 9 18702.0 10 18063.0 11 17111.0 12 16159.0 13 15129.5 14 14100.0 15 12916.5 16 11733.0 17 10678.5 18 9624.0 19 8919.0 20 8214.0 21 7616.5 22 7019.0 23 6664.0 24 6309.0 25 6150.5 26 6210.0 27 6428.0 28 6888.0 29 7348.0 30 7665.0 31 7982.0 32 8521.0 33 9060.0 34 9640.5 35 10221.0 36 10824.5 37 11428.0 38 12714.5 39 14001.0 40 14330.0 41 14659.0 42 16101.0 43 17543.0 44 20671.0 45 23799.0 46 70741.0 47 117683.0 48 78725.0 49 39767.0 50 35250.5 51 30734.0 52 25933.0 53 21132.0 54 20338.0 55 19544.0 56 18763.5 57 17983.0 58 16928.0 59 15873.0 60 14380.5 61 12888.0 62 11452.0 63 10016.0 64 8648.5 65 7281.0 66 6424.0 67 5567.0 68 4654.5 69 3742.0 70 3087.5 71 2433.0 72 2083.5 73 1734.0 74 1510.5 75 963.0 76 639.0 77 495.5 78 352.0 79 328.5 80 305.0 81 219.0 82 133.0 83 88.0 84 43.0 85 26.5 86 10.0 87 7.0 88 4.0 89 4.5 90 5.0 91 2.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 617430.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.108335671035604 #Duplication Level Percentage of deduplicated Percentage of total 1 84.1902193126026 35.45110015033174 2 5.424357947832805 4.5682137053438705 3 2.189338805636121 2.765682399760499 4 1.4625125884028125 2.4633588398232305 5 1.069392026643517 2.2515159210917135 6 0.8632206672594473 2.1809271369081684 7 0.753125300983199 2.2198997083305185 8 0.6578908128415374 2.216214974561753 9 0.572434428823246 2.1693834970692105 >10 2.6888217895435473 17.348940429651996 >50 0.07526199894880058 2.2210375411979983 >100 0.0452351910653737 3.5277813488808296 >500 0.0027297098056691025 0.6890044004796109 >1k 0.0035096268930031316 4.363749271388384 >5k 3.899585436670147E-4 0.853702068182435 >10k+ 0.0015598341746680588 14.709488606997983 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCTTAGCTCCTCGTATGCCG 25297 4.097144615583953 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 22221 3.5989504883144647 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTTAGCTCCTCGTATGC 21936 3.5527914095525 No Hit GAATCTGTCTCTTATACACATCTGACGCTTAGCTCCTCGTATGCCGTCTTC 20126 3.2596407689940556 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTTAGCTCCT 5199 0.84203877362616 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTTAGCTCCTCGTATGCCGTC 4811 0.7791976418379412 No Hit GAACTGTCTCTTATACACATCTGACGCTTAGCTCCTCGTATGCCGTCTTCT 4575 0.7409746853894369 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTTAGCTCCTCGTA 4295 0.6956254150268046 No Hit GAATGACTGTCTCTTATACACATCTGACGCTTAGCTCCTCGTATGCCGTCT 4066 0.6585361903373662 No Hit GCTGTCTCTTATACACATCTGACGCTTAGCTCCTCGTATGCCGTCTTCTGC 3827 0.6198273488492623 TruSeq Adapter, Index 20 (95% over 22bp) GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCTTAGCTCCTCGT 1612 0.26108222794486824 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCTTAGCTCCTCGTATG 1139 0.18447435336799312 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCTTAGCTCCTCGTAT 1128 0.18269277488946115 No Hit GAATGCTGTCTCTTATACACATCTGACGCTTAGCTCCTCGTATGCCGTCTT 1122 0.1817210048102619 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 678 0.10981001894951656 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 666 0.10786647879111803 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.09345188928299564 0.0 2 0.0 0.0 0.0 0.8546717846557504 0.0 3 0.0 0.0 0.0 0.9699885007207295 0.0 4 0.0 0.0 0.0 1.92118944657694 0.0 5 0.0 0.0 0.0 5.919699399122168 0.0 6 0.0 0.0 0.0 6.224673242310869 0.0 7 0.0 0.0 0.0 7.07464813825049 0.0 8 0.0 0.0 0.0 8.072817971267998 0.0 9 0.0 0.0 0.0 8.216316019629756 0.0 10 0.0 0.0 0.0 13.136387930615616 0.0 11 1.6196167986654359E-4 0.0 0.0 13.389534036247024 0.0 12 1.6196167986654359E-4 0.0 0.0 17.70484103461121 0.0 13 1.6196167986654359E-4 0.0 0.0 18.06196653871694 0.0 14 1.6196167986654359E-4 0.0 0.0 18.33746335616993 0.0 15 1.6196167986654359E-4 0.0 0.0 19.245744456861505 0.0 16 1.6196167986654359E-4 0.0 0.0 19.662471859158124 0.0 17 1.6196167986654359E-4 0.0 0.0 19.854396449799978 0.0 18 1.6196167986654359E-4 0.0 0.0 20.003887080316797 0.0 19 1.6196167986654359E-4 0.0 0.0 21.152519313930323 0.0 20 1.6196167986654359E-4 0.0 0.0 21.38185705262135 0.0 21 1.6196167986654359E-4 0.0 0.0 21.541389307289894 0.0 22 1.6196167986654359E-4 0.0 0.0 21.892036344200964 0.0 23 1.6196167986654359E-4 0.0 0.0 22.043794438235913 0.0 24 1.6196167986654359E-4 0.0 0.0 22.180652057723144 0.0 25 1.6196167986654359E-4 0.0 0.0 22.285603226276663 0.0 26 1.6196167986654359E-4 0.0 0.0 22.425214194321622 0.0 27 1.6196167986654359E-4 0.0 0.0 22.65082681437572 0.0 28 1.6196167986654359E-4 0.0 0.0 22.765981568760832 0.0 29 1.6196167986654359E-4 0.0 0.0 22.89911406961113 0.0 30 1.6196167986654359E-4 0.0 0.0 23.04066857781449 0.0 31 1.6196167986654359E-4 0.0 0.0 23.160196297556 0.0 32 1.6196167986654359E-4 0.0 0.0 23.303046499198288 0.0 33 1.6196167986654359E-4 0.0 0.0 23.435693115008988 0.0 34 1.6196167986654359E-4 0.0 0.0 23.673290899373207 0.0 35 1.6196167986654359E-4 0.0 0.0 23.83622434931895 0.0 36 1.6196167986654359E-4 0.0 0.0 23.972596083766582 0.0 37 1.6196167986654359E-4 0.0 0.0 24.151077854979512 0.0 38 1.6196167986654359E-4 0.0 0.0 24.34883306609656 0.0 39 1.6196167986654359E-4 0.0 0.0 24.644575093532872 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCAATAC 20 7.030746E-4 45.000004 16 TAGGGTA 20 7.030746E-4 45.000004 5 GCGATAT 20 7.030746E-4 45.000004 9 CGCACAT 20 7.030746E-4 45.000004 31 TAGTATA 20 7.030746E-4 45.000004 12 ACGGGAC 25 3.8887018E-5 45.0 5 GATACGC 30 2.1638643E-6 44.999996 5 CGTTTTT 16980 0.0 44.469963 1 GATACCT 3055 0.0 43.01146 5 TGATACC 3060 0.0 42.64706 4 CCGATGA 560 0.0 42.589287 18 TACGGCT 2625 0.0 42.514286 7 CGGCTGT 2680 0.0 42.229477 9 ACCGGTG 80 0.0 42.187504 17 ATACCTG 3120 0.0 42.1875 6 ACGGCTG 2660 0.0 42.039474 8 ACCGGTC 70 0.0 41.785717 17 TACGAAA 70 0.0 41.785717 20 ACATACG 70 0.0 41.785717 17 CGATGAA 585 0.0 41.153843 19 >>END_MODULE