##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933363.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 415734 Sequences flagged as poor quality 0 Sequence length 51 %GC 35 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.19513679420014 31.0 26.0 31.0 16.0 33.0 2 28.20310583209456 31.0 28.0 33.0 16.0 34.0 3 28.358803946754414 31.0 28.0 33.0 16.0 34.0 4 31.66593061909779 35.0 28.0 37.0 19.0 37.0 5 33.58527327570033 35.0 33.0 37.0 28.0 37.0 6 32.17024106760573 35.0 32.0 37.0 17.0 37.0 7 32.293709439208726 35.0 32.0 35.0 26.0 37.0 8 32.517232172494914 35.0 32.0 36.0 25.0 37.0 9 33.105608393828746 35.0 32.0 37.0 25.0 39.0 10 31.872339043715453 35.0 28.0 39.0 15.0 39.0 11 32.56658344037293 35.0 30.0 39.0 17.0 39.0 12 33.37010925255091 35.0 31.0 39.0 23.0 39.0 13 33.47354798982041 35.0 32.0 39.0 25.0 39.0 14 33.77424507016506 36.0 32.0 40.0 21.0 41.0 15 34.18882025525937 37.0 32.0 40.0 25.0 41.0 16 34.419924759581846 37.0 32.0 40.0 25.0 41.0 17 32.44080108915797 35.0 27.0 40.0 18.0 41.0 18 33.04987083086782 36.0 30.0 39.0 23.0 39.0 19 32.8016688555663 36.0 30.0 37.0 21.0 39.0 20 32.08837622133383 34.0 30.0 36.0 23.0 39.0 21 32.58222324851948 35.0 31.0 37.0 24.0 39.0 22 32.66231292124291 34.0 30.0 37.0 24.0 39.0 23 33.589218105808044 35.0 32.0 38.0 26.0 39.0 24 32.10577436533938 34.0 31.0 37.0 21.0 39.0 25 31.45254898564948 34.0 30.0 37.0 18.0 39.0 26 30.3152761140537 33.0 25.0 37.0 18.0 39.0 27 32.190927371829105 34.0 30.0 37.0 22.0 39.0 28 32.05247105120101 35.0 30.0 37.0 21.0 39.0 29 32.198660682070745 35.0 30.0 38.0 21.0 40.0 30 31.38212414668995 34.0 29.0 37.0 18.0 40.0 31 31.64377703050508 34.0 30.0 37.0 20.0 39.0 32 31.45652749113616 35.0 30.0 37.0 18.0 39.0 33 31.193154757609435 35.0 30.0 38.0 15.0 40.0 34 30.299734926659834 35.0 27.0 38.0 10.0 40.0 35 29.758675018160652 35.0 24.0 38.0 8.0 40.0 36 28.961797687944696 34.0 22.0 37.0 7.0 40.0 37 29.06345163012888 34.0 22.0 38.0 7.0 40.0 38 28.887690205756567 34.0 22.0 38.0 7.0 40.0 39 28.4586370130901 34.0 21.0 37.0 7.0 40.0 40 28.269075899493426 33.0 21.0 37.0 7.0 40.0 41 27.64346192517331 33.0 18.0 37.0 7.0 40.0 42 28.138268700659555 33.0 20.0 37.0 7.0 40.0 43 28.112100525816988 33.0 18.0 37.0 7.0 40.0 44 28.038765171960918 33.0 18.0 37.0 7.0 40.0 45 28.23911202836429 34.0 20.0 38.0 7.0 40.0 46 27.8161973762069 33.0 18.0 37.0 7.0 40.0 47 27.898562542394895 33.0 18.0 37.0 7.0 40.0 48 27.715919313791993 33.0 18.0 37.0 7.0 40.0 49 27.710062203235722 33.0 18.0 37.0 7.0 39.0 50 27.89385039472355 33.0 19.0 37.0 7.0 40.0 51 26.1277716039583 31.0 16.0 35.0 7.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 2.0 9 9.0 10 22.0 11 33.0 12 35.0 13 68.0 14 86.0 15 202.0 16 432.0 17 866.0 18 1546.0 19 2408.0 20 3888.0 21 5479.0 22 7674.0 23 10383.0 24 14085.0 25 19183.0 26 24135.0 27 26038.0 28 25448.0 29 25679.0 30 27426.0 31 30869.0 32 33628.0 33 36098.0 34 38311.0 35 39394.0 36 26121.0 37 13308.0 38 2818.0 39 58.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.09056271558256 2.1872158639899553 28.990652676952088 43.7315687434754 2 43.401550029586225 15.5625953133494 28.997868829588153 12.037985827476223 3 11.133080286914229 15.486825710670765 61.49942030240491 11.880673700010103 4 10.321984730621022 2.443629820991307 73.14412581121582 14.090259637171846 5 20.89004026613171 2.948519967094344 60.942333318901035 15.219106447872917 6 11.944897458471042 13.829756527010058 63.34555268513039 10.879793329388503 7 45.06439213535578 1.1947543381104264 50.74422587519904 2.9966276513347476 8 45.011233144270136 10.94137116521622 39.92745361216547 4.119942078348174 9 41.72932692538979 2.382773600427196 39.74440387363074 16.143495600552278 10 27.3242024948645 14.599238936435317 45.15723996593976 12.919318602760418 11 22.530512298729477 13.804499992783848 51.589958964145346 12.075028744341333 12 18.194326179720687 11.91964092424483 52.80612122174275 17.079911674291733 13 16.22503812533976 13.17693525186778 59.421889958483064 11.17613666430939 14 13.794156840672162 17.376495547633823 51.99959589545238 16.82975171624164 15 10.35878710906493 13.20772416978164 61.67573496514598 14.757753756007446 16 12.379550385583089 13.668595784804708 51.65105572313065 22.300798106481547 17 13.298647692996003 14.958122260868729 56.13517297117868 15.608057074956584 18 12.92412937118446 13.656087786902201 55.26947519327262 18.15030764864072 19 13.207002554518033 17.01135822424916 51.71143086685236 18.070208354380448 20 14.979530180355708 16.032366849956944 57.136053341800284 11.852049627887062 21 15.247249443153555 20.4481711863836 51.225062179181876 13.079517191280962 22 12.642218341535694 13.457643589410537 54.962548167818845 18.937589901234926 23 13.393179292528396 20.23553522204102 52.37555744779113 13.995728037639452 24 14.419556735797409 15.104610159380757 51.43433060562763 19.041502499194195 25 12.587616119922835 21.442075942790343 49.3322653427432 16.638042594543627 26 12.259521713403283 14.760880755483075 55.12563321739381 17.853964313719832 27 13.748935617486179 16.710204120904233 51.820635310078075 17.720224951531506 28 10.916595707832412 17.149186739597916 55.90136962577033 16.03284792679935 29 16.10597160684476 13.723438544838768 53.58955485959772 16.58103498871875 30 12.943612983301822 18.92532244175362 54.52476824123117 13.606296333713383 31 15.761520587683469 16.678212510884364 49.85495533201518 17.70531156941698 32 19.33135129674263 18.62392779998749 47.50248957265944 14.54223133061044 33 14.363270745236138 15.805298580342239 46.032799819115105 23.79863085530652 34 16.62769944243194 18.15776433969798 49.73179966035975 15.482736557510332 35 13.617842177931081 18.98353273968451 46.342853844044505 21.055771238339897 36 15.04279178513184 21.886831483592875 43.80276811615119 19.267608615124093 37 18.477680439896666 19.906719200257857 45.84830685005316 15.767293509792319 38 17.01785276162161 22.469415539744165 39.12429582377193 21.388435874862292 39 19.836963058109273 19.10404248870672 44.0416227684048 17.01737168477921 40 16.442484858106386 18.3386492324419 41.902755127076446 23.31611078237527 41 15.942646018848592 20.831348891358417 41.54844203264588 21.67756305714712 42 15.98810778045577 19.518249650016596 43.67720706028374 20.81643550924389 43 17.251415568608774 18.659046409482986 40.09150081542525 23.99803720648299 44 19.075658955004883 19.33399721937585 41.93763319815074 19.652710627468526 45 15.728085747136388 20.1260902403941 40.54130766307302 23.60451634939649 46 20.739703752880448 21.76704334983427 38.245368432699756 19.24788446458553 47 14.18623446723145 19.004219043907884 46.949972819158404 19.859573669702264 48 17.946331067461404 21.44664617279318 39.183708813808835 21.423313945936584 49 16.157687367403195 18.286933471883465 42.96858087142259 22.586798289290748 50 17.27739371809859 17.630263582001955 40.776313700587394 24.31602899931206 51 17.0637956000712 18.010314287501142 39.933948149537926 24.991941962889733 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 92.0 1 394.0 2 696.0 3 23856.5 4 47017.0 5 31177.0 6 15337.0 7 14605.0 8 13873.0 9 13567.0 10 13261.0 11 12425.0 12 11589.0 13 10510.5 14 9432.0 15 8620.5 16 7809.0 17 7010.0 18 6211.0 19 5729.5 20 5248.0 21 4780.0 22 4312.0 23 4109.5 24 3907.0 25 3756.0 26 3777.5 27 3950.0 28 4132.0 29 4314.0 30 4583.0 31 4852.0 32 5282.5 33 5713.0 34 6117.5 35 6522.0 36 7047.0 37 7572.0 38 8262.5 39 8953.0 40 9436.5 41 9920.0 42 11304.0 43 12688.0 44 14124.5 45 15561.0 46 33810.5 47 52060.0 48 41466.0 49 30872.0 50 27854.5 51 24837.0 52 20708.5 53 16580.0 54 15199.0 55 13818.0 56 12879.0 57 11940.0 58 11108.0 59 10276.0 60 9421.0 61 8566.0 62 7641.0 63 6716.0 64 5864.5 65 5013.0 66 4512.0 67 4011.0 68 3460.0 69 2909.0 70 2437.0 71 1965.0 72 1673.5 73 1382.0 74 1196.5 75 783.0 76 555.0 77 451.0 78 347.0 79 303.5 80 260.0 81 186.0 82 112.0 83 74.0 84 36.0 85 27.0 86 18.0 87 13.0 88 8.0 89 5.5 90 3.0 91 2.5 92 2.0 93 2.0 94 2.0 95 1.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 415734.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.465867344580786 #Duplication Level Percentage of deduplicated Percentage of total 1 82.12208433826608 36.516297082458145 2 6.5611395465005575 5.834935214079535 3 2.8417750554460635 3.7908597791581005 4 1.8447326099996677 3.2811054208987 5 1.3507554195252724 3.0031255649792166 6 1.0248631874365637 2.7342858323339083 7 0.8109672253140212 2.5242252743131215 8 0.6530568209638601 2.3230990375562115 9 0.5083211243874672 2.0342645716915135 >10 2.1605239734615593 14.371556805510439 >50 0.07163570511702774 2.204992961850961 >100 0.042981423070216636 4.098802340909309 >500 0.0022041755420623916 0.7238081130467539 >1k 0.0027552194275779892 2.188086137274039 >5k 0.0011020877710311958 3.5097587715916387 >10k+ 0.0011020877710311958 10.860797092348463 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 32799 7.889419677005008 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTTAGCTCCTCGTATGCCG 11526 2.7724458427744665 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTTAGCTCCTCGTATGC 8471 2.0376009660022993 No Hit GAATCTGTCTCTTATACACATCTGACGCTTAGCTCCTCGTATGCCGTCTTC 5853 1.4078713792954147 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTTAGCTCCT 2376 0.5715192887759962 No Hit GCTGTCTCTTATACACATCTGACGCTTAGCTCCTCGTATGCCGTCTTCTGC 1891 0.45485815449301714 TruSeq Adapter, Index 20 (95% over 22bp) GAACTGTCTCTTATACACATCTGACGCTTAGCTCCTCGTATGCCGTCTTCT 1617 0.38895062708366407 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTTAGCTCCTCGTATGCCGTC 1598 0.3843803970808257 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTTAGCTCCTCGTA 1448 0.34829963390052293 No Hit GAATGACTGTCTCTTATACACATCTGACGCTTAGCTCCTCGTATGCCGTCT 977 0.23500603751437218 No Hit GAATGATACCTGTCTCTTCTACACATCTGACGCTTAGCTCCTCGTATGCCG 888 0.2135981180273925 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCTTAGCTCCTCGT 585 0.1407149764031809 No Hit CTGTCTCTTATACACATCTGACGCTTAGCTCCTCGTATGCCGTCTTCTGCT 504 0.12123136428581738 TruSeq Adapter, Index 22 (95% over 22bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 487 0.11714221112538306 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTTAGCTCCTCGTATGCC 457 0.10992605848932249 No Hit GAATCTTTCTCTTATACACATCTGACGCTTAGCTCCTCGTATGCCGTCTTC 445 0.10703959743489828 No Hit GAATGATACGGCTGCCTCCTATACACATCTGACGCTTAGCTCCTCGTATGC 444 0.10679905901369625 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA 434 0.10439367480167608 No Hit GAATGACTCTCTCTTATACACATCTGACGCTTAGCTCCTCGTATGCCGTCT 424 0.10198829058965589 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.1589958964145343 0.0 2 0.0 0.0 0.0 0.9289593826821958 0.0 3 0.0 0.0 0.0 1.1324548870191036 0.0 4 0.0 0.0 0.0 1.8723510706365127 0.0 5 0.0 0.0 0.0 3.9104331134812162 0.0 6 0.0 0.0 0.0 4.285191973713961 0.0 7 0.0 0.0 0.0 4.807641424564745 0.0 8 0.0 0.0 0.0 5.546334916076145 0.0 9 0.0 0.0 0.0 5.77220049358484 0.0 10 0.0 0.0 0.0 9.557072551198603 0.0 11 0.0 0.0 0.0 10.296006581131204 0.0 12 0.0 0.0 0.0 13.22432132084458 0.0 13 0.0 0.0 0.0 13.533413192089172 0.0 14 0.0 0.0 0.0 13.74532754116815 0.0 15 0.0 0.0 0.0 14.368322052081378 0.0 16 0.0 0.0 0.0 14.737548528626478 0.0 17 0.0 0.0 0.0 15.053375475664728 0.0 18 0.0 0.0 0.0 15.350680964270422 0.0 19 0.0 0.0 0.0 16.293351036961134 0.0 20 0.0 0.0 0.0 16.60388613873294 0.0 21 0.0 0.0 0.0 16.92476439261643 0.0 22 0.0 0.0 0.0 17.40127100501763 0.0 23 0.0 0.0 0.0 17.704108877310972 0.0 24 0.0 0.0 0.0 17.945849990619003 0.0 25 0.0 0.0 0.0 18.144775264953072 0.0 26 0.0 0.0 0.0 18.34009246296911 0.0 27 0.0 0.0 0.0 18.579187653643917 0.0 28 0.0 0.0 0.0 18.776910235871977 0.0 29 0.0 0.0 0.0 19.005421736013894 0.0 30 0.0 0.0 0.0 19.235135928261823 0.0 31 0.0 0.0 0.0 19.440315201547143 0.0 32 0.0 0.0 0.0 19.64332962904165 0.0 33 0.0 0.0 0.0 19.830227982315616 0.0 34 0.0 0.0 0.0 20.048636868767048 0.0 35 0.0 0.0 0.0 20.27979429154219 0.0 36 0.0 0.0 0.0 20.46957910587058 0.0 37 0.0 0.0 0.0 20.664174688623014 0.0 38 0.0 0.0 0.0 20.900383418243397 0.0 39 0.0 0.0 0.0 21.27610443216095 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACATACG 30 2.1621454E-6 45.000004 17 CATGGGT 40 6.7975634E-9 45.0 4 CCGATGA 140 0.0 45.0 18 ATCCGGC 40 6.7975634E-9 45.0 6 CAAGGTC 20 7.0280867E-4 45.0 17 TGATTCG 20 7.0280867E-4 45.0 26 GGACCTA 20 7.0280867E-4 45.0 8 ATCGGGA 20 7.0280867E-4 45.0 4 CGATCGT 25 3.8864957E-5 45.0 10 CGTTTTT 13825 0.0 44.62568 1 TACGGCT 1220 0.0 43.340164 7 TGATACC 1525 0.0 43.229507 4 CGATGAA 125 0.0 43.199997 19 ACGGCTG 1225 0.0 42.97959 8 CTACGGC 100 0.0 42.75 6 GATACCT 1555 0.0 42.540195 5 ATGATAC 4130 0.0 41.840195 3 GAATGAT 4410 0.0 41.683674 1 AATTATC 65 0.0 41.53846 45 AATGATA 4125 0.0 41.399998 2 >>END_MODULE