SRR2933362.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933362.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	759730
Sequences flagged as poor quality	0
Sequence length	51
%GC	34

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	32512	4.27941505534861	No Hit
GAATCTGTCTCTTATACACATCTGACGCCTGAACACTCGTATGCCGTCTTC	26939	3.545864978347571	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCCTGAACACTCGTATGCCG	23011	3.0288391928711516	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCCTGAACACTCGTATGC	18296	2.4082239743066616	No Hit
GAACTGTCTCTTATACACATCTGACGCCTGAACACTCGTATGCCGTCTTCT	6560	0.8634646519158122	TruSeq Adapter, Index 13 (95% over 21bp)
GAATGATCTGTCTCTTATACACATCTGACGCCTGAACACTCGTATGCCGTC	5066	0.6668158424703513	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCTGAACACT	4253	0.5598041409448093	No Hit
GCTGTCTCTTATACACATCTGACGCCTGAACACTCGTATGCCGTCTTCTGC	4227	0.5563818725073382	TruSeq Adapter, Index 19 (95% over 23bp)
GAATGACTGTCTCTTATACACATCTGACGCCTGAACACTCGTATGCCGTCT	3907	0.5142616455846156	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCTGAACACTCGTA	3549	0.46713964171481975	No Hit
GAATGCTGTCTCTTATACACATCTGACGCCTGAACACTCGTATGCCGTCTT	2635	0.3468337435667935	No Hit
GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCCTGAACACTCGT	1587	0.20889000039487712	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA	959	0.12622905505903412	No Hit
GAATGATACGGCGCTGTCTCTTATACACATCTGACGCCTGAACACTCGTAT	913	0.12017427243889278	No Hit
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	906	0.1192528924749582	No Hit
GAATGATACGGCCTGTCTCTTATACACATCTGACGCCTGAACACTCGTATG	852	0.11214510418174878	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA	793	0.10437918734287181	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TACCCGT	20	7.0317736E-4	45.000004	7
AGCTACG	25	3.8895523E-5	45.0	9
CGTTTTT	26015	0.0	44.498367	1
CCACCGG	165	0.0	43.636368	15
TGATACC	2910	0.0	42.680412	4
GATACCT	2900	0.0	42.439655	5
CACCGGT	160	0.0	42.187504	16
GATGAAT	720	0.0	42.1875	20
CCGATGA	760	0.0	42.039474	18
ACGGCTG	2310	0.0	41.980522	8
GCGGGTC	70	0.0	41.785717	5
ATACCTG	2975	0.0	41.445377	6
CGGCTGT	2360	0.0	41.28178	9
TACGGCT	2350	0.0	41.17021	7
CGATGAA	745	0.0	41.073826	19
TACCTGT	3040	0.0	40.855263	7
GAATCTG	3135	0.0	40.837322	1
ATGATCT	640	0.0	40.781254	3
AATCTGT	3180	0.0	40.33019	2
AATGATC	660	0.0	40.227276	2