##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933361.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 501349 Sequences flagged as poor quality 0 Sequence length 51 %GC 33 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.40651322731271 31.0 27.0 31.0 16.0 33.0 2 28.55954036010843 31.0 28.0 33.0 16.0 34.0 3 28.665781720916964 31.0 28.0 33.0 16.0 34.0 4 31.930511480026887 35.0 30.0 37.0 19.0 37.0 5 33.606621335636454 35.0 33.0 37.0 28.0 37.0 6 32.63181735677143 35.0 33.0 37.0 17.0 37.0 7 32.41909727555056 35.0 32.0 37.0 26.0 37.0 8 32.89267755595404 35.0 32.0 37.0 27.0 37.0 9 33.243018336528046 35.0 32.0 38.0 25.0 39.0 10 32.35528942912023 35.0 28.0 39.0 16.0 39.0 11 33.07987250398425 37.0 31.0 39.0 17.0 39.0 12 33.78225946396622 37.0 31.0 39.0 25.0 39.0 13 33.863976990080765 37.0 32.0 39.0 25.0 39.0 14 34.21962744515298 37.0 32.0 40.0 23.0 41.0 15 34.608807437533535 37.0 32.0 40.0 25.0 41.0 16 34.74246482988896 37.0 32.0 40.0 25.0 41.0 17 32.839734396597976 36.0 29.0 40.0 18.0 41.0 18 33.33263654659728 36.0 31.0 39.0 23.0 39.0 19 33.00273861122691 36.0 31.0 37.0 23.0 39.0 20 32.19575186147773 34.0 30.0 35.0 24.0 39.0 21 32.57497870744731 35.0 31.0 36.0 24.0 39.0 22 32.477017008112114 34.0 30.0 37.0 24.0 39.0 23 33.52920221243086 35.0 32.0 38.0 26.0 39.0 24 31.842279529828524 34.0 30.0 36.0 21.0 39.0 25 31.191052540246414 34.0 29.0 36.0 18.0 39.0 26 29.91462833275822 33.0 25.0 36.0 18.0 39.0 27 31.922900015757488 34.0 30.0 37.0 22.0 39.0 28 31.9378855846925 35.0 30.0 37.0 21.0 39.0 29 31.916186129821742 35.0 30.0 37.0 21.0 39.0 30 31.048858180628663 34.0 27.0 37.0 18.0 39.0 31 31.343804415686478 34.0 30.0 36.0 18.0 39.0 32 31.0333799409194 35.0 30.0 37.0 16.0 39.0 33 30.468254648957114 35.0 27.0 37.0 12.0 40.0 34 29.263572880368766 34.0 23.0 37.0 8.0 39.0 35 28.560794975157027 34.0 21.0 37.0 7.0 39.0 36 27.914761972199006 33.0 18.0 37.0 7.0 39.0 37 27.81954486794628 34.0 18.0 37.0 7.0 40.0 38 27.791133521758297 33.0 18.0 37.0 7.0 40.0 39 27.441026111551036 33.0 18.0 37.0 7.0 39.0 40 27.09382087128926 33.0 16.0 37.0 7.0 39.0 41 26.819118019583165 33.0 15.0 37.0 7.0 39.0 42 27.046735906524198 33.0 15.0 37.0 7.0 40.0 43 27.244665891424937 33.0 15.0 37.0 7.0 40.0 44 27.090936652910447 33.0 15.0 37.0 7.0 40.0 45 27.312516829593758 33.0 15.0 37.0 7.0 40.0 46 27.06600192680149 33.0 15.0 37.0 7.0 40.0 47 27.100510821802775 33.0 15.0 37.0 7.0 40.0 48 26.895928784140388 33.0 15.0 37.0 7.0 39.0 49 26.675437669168584 33.0 15.0 37.0 7.0 39.0 50 26.87905431146766 33.0 15.0 37.0 7.0 40.0 51 25.506684963967217 31.0 12.0 35.0 7.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 5.0 9 18.0 10 30.0 11 26.0 12 51.0 13 82.0 14 139.0 15 263.0 16 590.0 17 1194.0 18 2139.0 19 3622.0 20 5411.0 21 7598.0 22 10856.0 23 14587.0 24 19536.0 25 26506.0 26 31928.0 27 32383.0 28 29917.0 29 29300.0 30 31360.0 31 34331.0 32 38522.0 33 42247.0 34 44737.0 35 46162.0 36 30028.0 37 14757.0 38 2979.0 39 44.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 22.190928873898223 2.0859720474160715 28.30822441054036 47.414874668145345 2 47.625107460072726 13.087091028405363 27.278602330911202 12.009199180610713 3 10.243163943679951 13.068541076176476 64.30570321273204 12.382591767411524 4 9.76246088054429 2.462556023847659 73.6147873038542 14.16019579175385 5 17.564610680384323 2.845722241392722 64.8787571133083 14.71090996491466 6 11.67330542197152 10.798266277583082 67.21325862822106 10.31516967222434 7 43.18129686106884 1.1646577533813771 52.826474172682104 2.8275712128676833 8 43.28641325703252 8.206658435540911 44.58730345527766 3.9196248521489023 9 39.787652912442226 2.4573700156976477 44.219296338478784 13.535680733381335 10 23.82591767411524 14.035931058005502 49.88560862792187 12.252542639957396 11 19.203588717639807 13.496187286700481 55.00160566790798 12.298618327751726 12 15.55922122114535 11.703025237908124 57.483310029540306 15.254443511406226 13 14.700139024910792 12.66024266528905 62.266205776814154 10.373412532986004 14 12.71589252197571 15.799971676417027 56.92800823378524 14.556127567822017 15 10.203072111443326 13.344795741090538 62.84205214331733 13.610080004148806 16 11.548043378963555 13.796576835697289 55.18650680464108 19.468872980698077 17 12.410117502976968 14.97459853315754 58.24645107499965 14.36883288886584 18 12.478133994482885 13.808544546812698 57.36782161727659 16.345499841427827 19 12.669816834181379 16.494697306666612 54.1532944116773 16.682191447474715 20 13.616263321558437 16.318173567714307 58.64577370255052 11.41978940817674 21 14.239382146967483 18.45301376885164 55.13684080351212 12.170763280668757 22 12.25792810995933 13.41041869037337 57.4204795461844 16.9111736534829 23 12.627929845277441 18.295438905832064 55.88043458748297 13.196196661407523 24 13.677498110098954 15.071337531340442 54.63120500888603 16.61995934967458 25 12.114116114722478 19.79240010451801 52.89548797344764 15.197995807311873 26 12.33970746924797 14.265312187717537 56.39664186026102 16.998338482773477 27 13.817121406445409 15.305505745498646 54.360934199529666 16.516438648526275 28 11.489002670794198 15.511150914831784 56.658136348132736 16.34171006624128 29 14.5984134804298 14.03014666429972 53.87384835713246 17.497591498138025 30 13.150120973613191 17.384696089949315 56.08069428681417 13.384488649623316 31 16.09677091207921 15.377511474043033 51.58023652186401 16.945481092013747 32 15.638407576358984 20.88385535824346 49.77690191862356 13.700835146774004 33 13.699239451958617 18.58545643852885 47.95601467241383 19.759289437098708 34 15.531097100024136 19.758092665987167 45.17990461734241 19.530905616646287 35 12.80006542348743 23.012512241971162 45.62430562342799 18.563116711113416 36 17.46168836479179 20.07264400647054 41.03409002511225 21.431577603625417 37 14.712904583433895 24.17617268609292 44.420752808921534 16.690169921551654 38 18.827204203060145 24.109951351254317 39.83632160431157 17.226522841373974 39 17.261628127312513 22.650090057026144 39.922888048046374 20.165393767614976 40 16.652072707834265 25.214770549058642 41.64524113940588 16.487915603701214 41 16.662843647838134 22.106955434238422 39.47030910603193 21.759891811891517 42 16.414713104045287 23.532509289935753 42.925985690606744 17.126791915412216 43 17.73315594525969 20.463788698092547 39.889976842478994 21.913078514168774 44 18.6622492515194 20.797288914508655 40.34853964005114 20.191922193920803 45 16.940893469419507 20.510861695146495 40.19355778110658 22.354687054327425 46 19.009113412014386 23.13398450979258 38.64393865351282 19.21296342468021 47 14.899401414982377 20.569304017760086 45.61393360712797 18.91736096012957 48 17.27878184657793 21.685891464827893 39.04206450995215 21.993262178642023 49 15.649377978214776 20.972815344201344 42.7007932597851 20.67701341779878 50 16.586250296699504 19.35438187769398 41.42942341562465 22.62994440998187 51 16.690369383403578 19.821322073046918 39.76212179539602 23.726186748153484 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 86.0 1 463.5 2 841.0 3 29347.0 4 57853.0 5 38935.0 6 20017.0 7 18782.5 8 17548.0 9 17156.0 10 16764.0 11 16098.5 12 15433.0 13 14438.0 14 13443.0 15 12729.5 16 12016.0 17 11118.5 18 10221.0 19 9466.0 20 8711.0 21 8093.0 22 7475.0 23 6954.5 24 6434.0 25 6090.5 26 5678.0 27 5609.0 28 5777.5 29 5946.0 30 6307.0 31 6668.0 32 6992.0 33 7316.0 34 7854.5 35 8393.0 36 8819.5 37 9246.0 38 10024.0 39 10802.0 40 11360.5 41 11919.0 42 12985.5 43 14052.0 44 15633.0 45 17214.0 46 35897.0 47 54580.0 48 43794.0 49 33008.0 50 30132.5 51 27257.0 52 23182.5 53 19108.0 54 17269.5 55 15431.0 56 14593.5 57 13756.0 58 12680.0 59 11604.0 60 10533.5 61 9463.0 62 8531.0 63 7599.0 64 6791.5 65 5984.0 66 5149.0 67 4314.0 68 3757.5 69 3201.0 70 2725.5 71 2250.0 72 1883.5 73 1517.0 74 1325.0 75 914.5 76 696.0 77 514.5 78 333.0 79 253.0 80 173.0 81 137.5 82 102.0 83 73.0 84 44.0 85 34.5 86 25.0 87 17.5 88 10.0 89 7.5 90 5.0 91 3.0 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 501349.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.419314678704644 #Duplication Level Percentage of deduplicated Percentage of total 1 83.46151519144797 43.74995428381999 2 7.348758097793477 7.704337264518303 3 3.1459572974600767 4.9472677662398095 4 1.8662442970108242 3.9130898828939333 5 1.2790308796535084 3.3522961082168825 6 0.8574324867033323 2.696761400174773 7 0.5418884878342437 1.988379621518544 8 0.38874217580907616 1.6302078754096228 9 0.2716343419897691 1.2814997445274123 >10 0.7436514931844898 6.157862879781531 >50 0.04757262556145798 1.7235082417323473 >100 0.040224008596613625 4.1845912367717 >500 0.0038676931342897713 1.3733731123009447 >1k 0.0019338465671448857 1.9392255416531643 >5k 7.735386268579544E-4 2.982737707140758 >10k+ 7.735386268579544E-4 10.374907333300301 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 40721 8.122286072177266 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCTGAACACTCGTATGCCG 10452 2.0847752763045304 No Hit GAATCTGTCTCTTATACACATCTGACGCCTGAACACTCGTATGCCGTCTTC 7793 1.5544062120399165 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCTGAACACTCGTATGC 6919 1.3800765534587682 No Hit GAACTGTCTCTTATACACATCTGACGCCTGAACACTCGTATGCCGTCTTCT 2714 0.5413394661204072 TruSeq Adapter, Index 13 (95% over 21bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCTGAACACT 2134 0.42565159200477115 No Hit GCTGTCTCTTATACACATCTGACGCCTGAACACTCGTATGCCGTCTTCTGC 1943 0.38755437828738065 TruSeq Adapter, Index 19 (95% over 23bp) GAATGATCTGTCTCTTATACACATCTGACGCCTGAACACTCGTATGCCGTC 1637 0.32651905159878647 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCTGAACACTCGTA 1137 0.22678812563703127 No Hit GAATGACTGTCTCTTATACACATCTGACGCCTGAACACTCGTATGCCGTCT 999 0.19926239007158683 No Hit GAATGCTGTCTCTTATACACATCTGACGCCTGAACACTCGTATGCCGTCTT 881 0.17572589154461263 No Hit GAATGATACCTGTCTCTTCTACACATCTGACGCCTGAACACTCGTATGCCG 845 0.16854526487536625 No Hit GAATCTTTCTCTTATACACATCTGACGCCTGAACACTCGTATGCCGTCTTC 718 0.14321360968108043 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 632 0.12605989041565854 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCTGAACACTCGTATGCC 568 0.11329433189255389 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCCTGAACACTCGT 564 0.11249648448485984 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA 527 0.10511639596368996 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC 521 0.1039196248521489 No Hit GAATCTGTCTCTTATCCACATCTGACGCCTGAACACTCGTATGCCGTCTTC 519 0.10352070114830188 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.09115406632904424 0.0 2 0.0 0.0 0.0 0.6508440228264143 0.0 3 0.0 0.0 0.0 0.8429257862287548 0.0 4 0.0 0.0 0.0 1.7315283365479934 0.0 5 0.0 0.0 0.0 3.822287468410229 0.0 6 0.0 0.0 0.0 4.42007463862499 0.0 7 0.0 0.0 0.0 4.992729615497388 0.0 8 0.0 0.0 0.0 5.74170886947017 0.0 9 0.0 0.0 0.0 6.078400475517055 0.0 10 0.0 0.0 0.0 8.89579913393664 0.0 11 0.0 0.0 0.0 9.466858415993649 0.0 12 0.0 0.0 0.0 11.510145627098089 0.0 13 0.0 0.0 0.0 11.785004059048687 0.0 14 0.0 0.0 0.0 11.95115578170097 0.0 15 0.0 3.9892370384702073E-4 0.0 12.367831590369184 0.0 16 0.0 3.9892370384702073E-4 0.0 12.629326078240906 0.0 17 0.0 3.9892370384702073E-4 0.0 12.85631366572986 0.0 18 0.0 3.9892370384702073E-4 0.0 13.080309325439963 0.0 19 0.0 3.9892370384702073E-4 0.0 13.795380064585748 0.0 20 0.0 3.9892370384702073E-4 0.0 14.01319240688622 0.0 21 0.0 3.9892370384702073E-4 0.0 14.222028965850136 0.0 22 0.0 3.9892370384702073E-4 0.0 14.531793221887348 0.0 23 0.0 3.9892370384702073E-4 0.0 14.772344215307102 0.0 24 0.0 3.9892370384702073E-4 0.0 14.960237279819049 0.0 25 0.0 3.9892370384702073E-4 0.0 15.114620753207845 0.0 26 0.0 3.9892370384702073E-4 0.0 15.27339238733896 0.0 27 0.0 3.9892370384702073E-4 0.0 15.457296214812436 0.0 28 0.0 3.9892370384702073E-4 0.0 15.623647399316644 0.0 29 0.0 3.9892370384702073E-4 0.0 15.804559299011268 0.0 30 0.0 3.9892370384702073E-4 0.0 15.996840524265531 0.0 31 1.9946185192351037E-4 3.9892370384702073E-4 0.0 16.176755114700537 0.0 32 1.9946185192351037E-4 3.9892370384702073E-4 0.0 16.338518676610505 0.0 33 1.9946185192351037E-4 3.9892370384702073E-4 0.0 16.523818737047446 0.0 34 1.9946185192351037E-4 3.9892370384702073E-4 0.0 16.71330749637478 0.0 35 1.9946185192351037E-4 3.9892370384702073E-4 0.0 16.923340826450236 0.0 36 1.9946185192351037E-4 3.9892370384702073E-4 0.0 17.097471023179462 0.0 37 1.9946185192351037E-4 3.9892370384702073E-4 0.0 17.282771083616403 0.0 38 1.9946185192351037E-4 3.9892370384702073E-4 0.0 17.485823248874535 0.0 39 1.9946185192351037E-4 3.9892370384702073E-4 0.0 17.799377280098295 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCATT 20 7.029478E-4 45.0 22 CGCATTT 25 3.8876486E-5 45.0 23 TACGAAA 45 3.8380676E-10 45.0 20 TAGGGCG 25 3.8876486E-5 45.0 5 TTCGGTC 25 3.8876486E-5 45.0 10 TATACGG 40 6.8012014E-9 45.0 27 CCACCGT 25 3.8876486E-5 45.0 15 CGTTTTT 18775 0.0 44.64048 1 CGACCAC 800 0.0 42.46875 12 TACGGCT 900 0.0 42.0 7 GATACCT 1325 0.0 41.773586 5 GAATGAT 3975 0.0 41.03774 1 TGATACC 1360 0.0 41.029415 4 GCGACCA 835 0.0 40.958084 11 ACGGCTG 925 0.0 40.864864 8 ATGATAC 3745 0.0 40.79439 3 GATACGG 2405 0.0 40.602913 5 AATGATA 3735 0.0 40.60241 2 ACCACCG 455 0.0 40.54945 14 GAATCTG 1155 0.0 40.519478 1 >>END_MODULE