SRR2933360.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933360.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	409875
Sequences flagged as poor quality	0
Sequence length	51
%GC	41

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	10908	2.661299176578225	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCG	8220	2.0054894784995425	No Hit
GAATCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCTTC	8088	1.9732845379688928	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGC	7043	1.718328758767917	No Hit
GAACTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCTTCT	1781	0.4345227203415676	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAGTTCGCTT	1582	0.38597133272339124	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTA	1526	0.3723086306800854	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTC	1474	0.35962183592558705	No Hit
GCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCTTCTGC	1367	0.33351631594998477	No Hit
GAATGACTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCT	1308	0.3191216834400732	No Hit
GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG	612	0.14931381518755718	No Hit
GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGT	584	0.14248246416590424	No Hit
GAATGCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCTT	537	0.13101555352241537	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGTAAAC	20	7.027968E-4	45.000004	23
CGGGTCA	25	3.8863982E-5	45.0	6
TATCGGG	25	3.8863982E-5	45.0	3
ACCGGTC	30	2.1620726E-6	44.999996	17
CGGGATA	60	0.0	44.999996	6
CGTTTTT	8475	0.0	44.123894	1
TGATACC	990	0.0	42.272728	4
GATACCT	985	0.0	42.03046	5
TACGGCT	995	0.0	41.15578	7
TCGGGAT	115	0.0	41.086956	5
ACGGCTG	1000	0.0	40.725002	8
TTCTTCG	105	0.0	40.714287	1
CGATGAA	260	0.0	40.673077	19
ATACCTG	1045	0.0	40.047848	6
GGCGACT	175	0.0	39.857143	10
CCGATGA	260	0.0	39.80769	18
AATGATA	3285	0.0	39.72603	2
ATGATAC	3325	0.0	39.721806	3
ATACGGC	2215	0.0	39.51467	6
GAATGAT	3460	0.0	39.47254	1