##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933359.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 296484 Sequences flagged as poor quality 0 Sequence length 51 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.74508573818486 31.0 28.0 31.0 16.0 33.0 2 29.20886455930168 31.0 30.0 33.0 16.0 34.0 3 29.443187490724625 31.0 30.0 33.0 16.0 34.0 4 32.16633949892743 35.0 30.0 37.0 19.0 37.0 5 33.55282578486529 35.0 33.0 37.0 28.0 37.0 6 33.007578823815116 35.0 33.0 37.0 25.0 37.0 7 31.684283131636107 35.0 30.0 35.0 23.0 37.0 8 33.054731452624765 35.0 32.0 35.0 28.0 37.0 9 32.55548697400197 35.0 31.0 37.0 25.0 39.0 10 30.33215957690803 34.0 27.0 37.0 15.0 39.0 11 31.14182890139097 35.0 27.0 39.0 15.0 39.0 12 32.16503420083377 35.0 30.0 39.0 18.0 39.0 13 32.269609827174484 35.0 30.0 39.0 18.0 39.0 14 32.76550505254921 36.0 30.0 39.0 17.0 41.0 15 33.35539185925716 36.0 30.0 39.0 21.0 41.0 16 33.57077616330055 36.0 31.0 39.0 22.0 41.0 17 31.55469097826527 34.0 27.0 39.0 17.0 41.0 18 32.39749531172003 35.0 29.0 39.0 19.0 39.0 19 32.25858393707586 35.0 30.0 37.0 18.0 39.0 20 32.23248472092929 34.0 30.0 37.0 23.0 39.0 21 32.60411691693312 35.0 31.0 37.0 23.0 39.0 22 33.05603000499184 35.0 31.0 38.0 25.0 39.0 23 34.166204584395786 35.0 33.0 38.0 27.0 40.0 24 32.30564549857665 35.0 30.0 37.0 21.0 39.0 25 31.475303894982527 34.0 29.0 37.0 18.0 39.0 26 31.016675436111225 33.0 27.0 37.0 20.0 39.0 27 32.448213057028376 35.0 30.0 38.0 22.0 39.0 28 32.509653134739146 35.0 31.0 38.0 21.0 39.0 29 32.91208294545405 35.0 31.0 38.0 22.0 40.0 30 31.79818472497673 35.0 30.0 38.0 18.0 40.0 31 31.91970224362866 35.0 30.0 37.0 21.0 40.0 32 31.8449865760041 35.0 30.0 38.0 18.0 40.0 33 32.077343128128334 35.0 30.0 38.0 18.0 40.0 34 31.493213799058296 35.0 30.0 38.0 15.0 40.0 35 31.048562485665332 35.0 29.0 38.0 12.0 40.0 36 30.38691801243912 35.0 27.0 38.0 10.0 40.0 37 30.633167388459412 35.0 29.0 38.0 10.0 40.0 38 30.489240566101376 35.0 27.0 38.0 10.0 40.0 39 30.04990825811848 34.0 26.0 38.0 9.0 40.0 40 29.807881706938655 34.0 25.0 38.0 8.0 40.0 41 29.158295219978143 33.0 23.0 37.0 8.0 40.0 42 29.785054168184455 34.0 25.0 38.0 8.0 40.0 43 29.72424481590912 34.0 24.0 38.0 8.0 40.0 44 29.795796737766626 34.0 25.0 38.0 8.0 40.0 45 30.04162450587553 35.0 26.0 38.0 8.0 40.0 46 29.89292845482387 34.0 25.0 38.0 8.0 40.0 47 29.982521822425493 34.0 26.0 38.0 7.0 40.0 48 29.671247015015986 34.0 25.0 37.0 8.0 40.0 49 29.469070843620568 34.0 26.0 37.0 7.0 39.0 50 29.623622185345585 34.0 26.0 37.0 7.0 40.0 51 27.935719971398118 32.0 23.0 36.0 7.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 17.0 10 23.0 11 23.0 12 37.0 13 56.0 14 82.0 15 169.0 16 328.0 17 560.0 18 962.0 19 1518.0 20 2323.0 21 3365.0 22 4461.0 23 6125.0 24 8154.0 25 11266.0 26 14062.0 27 15502.0 28 16227.0 29 17102.0 30 19576.0 31 22238.0 32 24645.0 33 27736.0 34 30338.0 35 32046.0 36 23416.0 37 11723.0 38 2346.0 39 55.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 21.10164460814074 2.873342237692422 40.79714251021977 35.22787064394706 2 36.31595634165756 8.717502462190202 39.968767285924365 14.99777391022787 3 15.10401910389768 8.673992525734947 60.8933365712821 15.32865179908528 4 13.678984363405783 3.252114785283523 64.50263757909364 18.56626327221705 5 18.006367965893606 3.7624290012277224 60.0302208550883 18.20098217779037 6 16.319599034011954 8.399104167509883 61.86910592139879 13.41219087707937 7 60.7941743905236 1.3990636931503893 34.853145532305284 2.9536163840207226 8 62.59494610164461 5.705872829562472 28.532062438445244 3.167118630347675 9 58.36503824826972 2.836915314148487 28.94759919590939 9.850447241672402 10 33.96574520041554 17.565534733746173 35.26699585812388 13.201724207714413 11 25.966325332901608 17.741598197541858 41.65452435881869 14.637552110737847 12 22.20693190863588 15.38093118009741 45.52758327599466 16.884553635272052 13 19.67222514537041 16.11014422363433 49.606386853928036 14.611243777067228 14 17.182714750205744 16.705791880843485 48.11355756128493 17.997935807665844 15 14.846669634786364 15.794106933257781 52.35560772250779 17.003615709448063 16 18.38008121854805 15.48886280541277 45.45877686485611 20.672279111183066 17 19.02193710284535 15.973543260344572 46.472322283833186 18.53219735297689 18 18.743001308670955 15.428151266172879 46.56979803294613 19.259049392210034 19 18.785836672467994 17.944644567666383 43.982474602339416 19.287044157526207 20 19.15550248917311 19.657721833218655 46.537081259022415 14.649694418585826 21 19.794997369166634 19.597010293978766 44.67930815828173 15.928684178572874 22 17.761835377288488 16.39144102211249 46.66052805547686 19.186195545122164 23 17.96791732437501 19.963977820051 45.37985186384426 16.688252991729737 24 17.679200226656413 18.352086453231877 44.2354393491723 19.73327397093941 25 17.900460058552905 19.91810687929197 42.73518975728876 19.446243304866368 26 16.90108066539847 18.052576192981746 44.311328773222165 20.73501436839762 27 17.30582426033108 17.95611230285614 44.63748465347203 20.100578783340755 28 15.000134914531642 19.09479094993322 46.241281148392495 19.663792987142646 29 18.780777377531336 18.770321501328908 43.51196017323026 18.936940947909502 30 19.2546646699316 18.966284858542114 44.17371595094507 17.605334520581213 31 19.618259332712725 18.165904399562876 43.72613699221543 18.489699275508965 32 21.050714372445057 19.52786659651111 41.54996559679443 17.871453434249403 33 20.161627608909754 18.130489335006274 39.58999473833327 22.117888317750705 34 20.261127075997358 21.78869686053885 39.72153640668636 18.228639656777432 35 19.73226211195208 22.91118576381862 37.295773127723585 20.06077899650571 36 20.834513835485218 22.438984903063908 37.74706223607345 18.979439025377424 37 20.78155988181487 22.268992593192213 38.55789857125511 18.391548953737807 38 20.433817676501935 21.261181041810012 37.46272986063329 20.84227142105476 39 21.682114380539925 21.257808178518907 36.86505848544947 20.195018955491694 40 22.095964706358522 20.533654429918645 35.612039772803925 21.758341090918904 41 20.655077508398428 21.812306903576584 36.86033647684192 20.672279111183066 42 19.17607695524885 21.06015838966015 38.56498158416643 21.19878307092457 43 20.149148014732667 20.623709879791154 37.72480133835215 21.502340767124025 44 22.14048650180111 21.082419287381445 35.407306971033854 21.369787239783598 45 19.70055719701569 20.624384452449373 35.261261990529 24.413796360005936 46 20.95391319599034 22.26730616154666 35.59348902470285 21.18529161776015 47 17.812765612984176 21.363041513201388 39.97922316212679 20.844969711687646 48 20.354555389160968 23.024513970399752 35.42720686445137 21.19372377598791 49 19.73968241119251 20.929291293965274 37.58685122974595 21.74417506509626 50 19.499534544865828 20.916137127129964 36.299092025202036 23.285236302802176 51 19.65401168359844 21.37754482535314 34.731047881167285 24.23739560988114 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 84.0 1 348.0 2 612.0 3 11900.0 4 23188.0 5 15242.0 6 7296.0 7 6937.5 8 6579.0 9 6496.0 10 6413.0 11 6037.0 12 5661.0 13 5238.5 14 4816.0 15 4453.0 16 4090.0 17 3706.5 18 3323.0 19 3068.0 20 2813.0 21 2768.0 22 2723.0 23 2535.5 24 2348.0 25 2412.0 26 2722.5 27 2969.0 28 3186.0 29 3403.0 30 3628.5 31 3854.0 32 4248.5 33 4643.0 34 5108.0 35 5573.0 36 5953.0 37 6333.0 38 6555.5 39 6778.0 40 7460.0 41 8142.0 42 8947.0 43 9752.0 44 10818.5 45 11885.0 46 18837.0 47 25789.0 48 23064.5 49 20340.0 50 19396.0 51 18452.0 52 17016.0 53 15580.0 54 14872.0 55 14164.0 56 14041.5 57 13919.0 58 12972.5 59 12026.0 60 10897.0 61 9768.0 62 8889.0 63 8010.0 64 7264.5 65 6519.0 66 5718.5 67 4918.0 68 4252.0 69 3586.0 70 3106.5 71 2627.0 72 2287.5 73 1948.0 74 1676.5 75 1128.0 76 851.0 77 647.0 78 443.0 79 332.5 80 222.0 81 167.0 82 112.0 83 68.0 84 24.0 85 19.5 86 15.0 87 10.5 88 6.0 89 5.0 90 4.0 91 3.0 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 296484.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.06046303184055 #Duplication Level Percentage of deduplicated Percentage of total 1 78.5168557022284 38.52073296555535 2 7.709430495464496 7.564564596385602 3 3.8664451594399947 5.69068769428034 4 2.5723772817900903 5.048080821488368 5 1.786853777105591 4.383193683749674 6 1.3360738162868802 3.9329040043051564 7 1.0060344292692185 3.454956044814491 8 0.7607045874206544 2.9856415431442023 9 0.5751096427484316 2.5393630830583005 >10 1.8032017867059866 12.737054834011596 >50 0.0383357571324348 1.268664851573026 >100 0.02300145427946088 2.079447698764305 >500 0.002788055064177076 0.9923626413112997 >1k 0.002091041298132807 3.091301956393573 >5k 0.0 0.0 >10k+ 6.97013766044269E-4 5.711043581164719 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 16701 5.633018982474603 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCG 3783 1.2759541830250536 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGC 2907 0.9804913587242482 No Hit GAATCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCTTC 2350 0.7926228734096951 No Hit GCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCTTCTGC 797 0.2688172043010753 No Hit GAACTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCTTCT 775 0.26139690506064406 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAGTTCGCTT 740 0.2495918835417763 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTA 590 0.1989989341752 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTC 452 0.15245342075794985 No Hit GAATGACTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCT 367 0.12378408278355663 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 350 0.11805021518867798 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCC 349 0.11771292885956745 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.09713846278382644 0.0 2 0.0 0.0 0.0 0.5474157121463553 0.0 3 0.0 0.0 0.0 0.6867149660689953 0.0 4 0.0 0.0 0.0 1.1902834554309845 0.0 5 0.0 0.0 0.0 2.3397552650395976 0.0 6 0.0 0.0 0.0 2.63994009794795 0.0 7 0.0 0.0 0.0 2.998812752121531 0.0 8 0.0 0.0 0.0 3.469664467559801 0.0 9 0.0 0.0 0.0 3.6838412865449737 0.0 10 0.0 0.0 0.0 5.6424629996896964 0.0 11 0.0 0.0 0.0 6.399670808542788 0.0 12 0.0 0.0 0.0 8.042929803969185 0.0 13 0.0 0.0 0.0 8.30432670902983 0.0 14 0.0 0.0 0.0 8.454756411813117 0.0 15 0.0 0.0 0.0 8.925945413580497 0.0 16 0.0 0.0 0.0 9.180596592058931 0.0 17 0.0 0.0 0.0 9.469313689777525 0.0 18 0.0 0.0 0.0 9.738130894078601 0.0 19 0.0 0.0 0.0 10.279475452300968 0.0 20 0.0 0.0 0.0 10.561446823437352 0.0 21 0.0 0.0 0.0 10.875460395839236 0.0 22 0.0 0.0 0.0 11.303814033809582 0.0 23 0.0 0.0 0.0 11.597590426464835 0.0 24 0.0 0.0 0.0 11.856963613550816 0.0 25 0.0 0.0 0.0 12.07856073177642 0.0 26 0.0 0.0 0.0 12.272500371014962 0.0 27 0.0 0.0 0.0 12.535246421392047 0.0 28 0.0 0.0 0.0 12.7423402274659 0.0 29 0.0 0.0 0.0 12.97405593556482 0.0 30 0.0 0.0 0.0 13.270530618852957 0.0 31 0.0 0.0 0.0 13.480660001888804 0.0 32 0.0 0.0 0.0 13.692138530241092 0.0 33 0.0 0.0 0.0 13.905640776568044 0.0 34 0.0 0.0 0.0 14.184576570742434 0.0 35 0.0 0.0 0.0 14.496566425169656 0.0 36 0.0 0.0 0.0 14.757963330230298 0.0 37 0.0 0.0 0.0 15.00418235048097 0.0 38 0.0 0.0 0.0 15.321568786173959 0.0 39 0.0 0.0 0.0 15.996141444394976 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACGGG 30 2.1600335E-6 45.000004 3 TTTACGG 20 7.0248084E-4 45.0 2 TAGCGGG 35 1.2078453E-7 45.0 3 GGCAACG 20 7.0248084E-4 45.0 8 GGATACC 20 7.0248084E-4 45.0 8 TCGGAAC 20 7.0248084E-4 45.0 25 GGGCGTA 20 7.0248084E-4 45.0 7 CGTGTTT 20 7.0248084E-4 45.0 1 CCGTTGG 35 1.2078453E-7 45.0 2 CGTTTTT 6865 0.0 44.344498 1 TCGTTTG 120 0.0 43.125004 1 TACGGGG 80 0.0 42.1875 4 TGATACC 395 0.0 42.151897 4 GATACCT 395 0.0 41.582275 5 CGGGATA 55 6.002665E-11 40.909092 6 CTACGGG 50 1.0750227E-9 40.5 3 GGGTAAT 45 1.9199433E-8 40.000004 7 TACGGCT 400 0.0 39.9375 7 ACGGCTG 395 0.0 39.873417 8 GTTTTTT 7820 0.0 39.763428 2 >>END_MODULE