SRR2933357.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933357.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	192132
Sequences flagged as poor quality	0
Sequence length	51
%GC	35

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12647	6.582453729727479	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCAAGGACGATCGTATGCCG	2873	1.4953261299523244	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCAAGGACGATCGTATGC	2349	1.2225969645868466	No Hit
GAATCTGTCTCTTATACACATCTGACGCAAGGACGATCGTATGCCGTCTTC	1546	0.8046551329294443	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAAGGACGAT	626	0.32581766702059	No Hit
GCTGTCTCTTATACACATCTGACGCAAGGACGATCGTATGCCGTCTTCTGC	582	0.3029167447379926	No Hit
GAACTGTCTCTTATACACATCTGACGCAAGGACGATCGTATGCCGTCTTCT	516	0.2685653613140966	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAAGGACGATCGTA	373	0.19413736389565509	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCAAGGACGATCGTATGCCGTC	343	0.17852309870297503	No Hit
GAATGACTGTCTCTTATACACATCTGACGCAAGGACGATCGTATGCCGTCT	262	0.13636458268273893	No Hit
GAATGATACCTGTCTCTTCTACACATCTGACGCAAGGACGATCGTATGCCG	208	0.10825890533591488	No Hit
GAATCTTTCTCTTATACACATCTGACGCAAGGACGATCGTATGCCGTCTTC	200	0.10409510128453354	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTTCGTG	20	7.0186064E-4	45.000004	1
GGATGCA	30	2.1560372E-6	45.000004	8
GGAACGC	20	7.0186064E-4	45.000004	8
CGGTGTC	20	7.0186064E-4	45.000004	19
CTTCTCG	20	7.0186064E-4	45.000004	1
ATTTGCG	20	7.0186064E-4	45.000004	1
ACCGGTG	25	3.878644E-5	45.0	17
TTGTCGG	50	2.1827873E-11	45.0	2
CGCGCGG	25	3.878644E-5	45.0	2
ATATCAC	25	3.878644E-5	45.0	30
TCCGTTG	25	3.878644E-5	45.0	1
ACCACCG	105	0.0	45.0	14
CGATGAA	45	3.8198777E-10	45.0	19
CGTTTTT	5535	0.0	44.471542	1
CGACCAC	210	0.0	41.785713	12
TACGGCT	275	0.0	41.727272	7
TGATACC	335	0.0	41.641792	4
GTCGGGA	65	0.0	41.53846	4
GCGAGAC	60	3.6379788E-12	41.250004	21
CACGACC	60	3.6379788E-12	41.250004	27