##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933356.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 657834 Sequences flagged as poor quality 0 Sequence length 51 %GC 35 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.580401742688885 31.0 28.0 33.0 25.0 34.0 2 28.93771985029658 31.0 28.0 33.0 16.0 34.0 3 28.8719418576723 31.0 28.0 34.0 16.0 34.0 4 33.33734194340821 35.0 32.0 37.0 28.0 37.0 5 34.367919566334365 35.0 33.0 37.0 32.0 37.0 6 33.895870386754105 35.0 33.0 37.0 28.0 37.0 7 33.86466950628882 35.0 33.0 37.0 29.0 37.0 8 33.80539467403631 35.0 33.0 37.0 28.0 37.0 9 35.004917653997815 37.0 34.0 39.0 28.0 39.0 10 34.88500746388907 37.0 34.0 39.0 28.0 39.0 11 35.210119878267164 37.0 34.0 39.0 28.0 39.0 12 35.381869894228636 37.0 34.0 39.0 30.0 39.0 13 35.60934369460988 37.0 35.0 39.0 30.0 39.0 14 36.357958086690566 38.0 35.0 40.0 30.0 41.0 15 36.714839914020864 39.0 35.0 41.0 30.0 41.0 16 36.58747951610893 38.0 34.0 41.0 30.0 41.0 17 35.86254587023474 38.0 34.0 40.0 27.0 41.0 18 35.56513801354141 38.0 34.0 39.0 28.0 40.0 19 34.76055661458666 37.0 34.0 38.0 27.0 40.0 20 33.97196405172126 35.0 33.0 37.0 27.0 40.0 21 34.14761170751284 35.0 33.0 38.0 27.0 40.0 22 34.55906353274534 35.0 33.0 38.0 29.0 40.0 23 34.918979560192994 35.0 33.0 39.0 30.0 40.0 24 34.290026055205416 35.0 33.0 38.0 27.0 40.0 25 33.28168200488269 35.0 33.0 38.0 24.0 40.0 26 33.2466108471134 35.0 32.0 38.0 24.0 40.0 27 34.092184350459235 35.0 33.0 38.0 25.0 40.0 28 33.781324771902945 35.0 33.0 38.0 24.0 40.0 29 33.70003830753655 35.0 33.0 39.0 23.0 40.0 30 32.85236092996105 35.0 32.0 38.0 21.0 40.0 31 32.683441415311464 35.0 32.0 38.0 20.0 40.0 32 31.80805035920916 35.0 31.0 38.0 15.0 40.0 33 30.84937385419422 35.0 27.0 39.0 10.0 40.0 34 29.93875810614836 35.0 22.0 39.0 7.0 40.0 35 29.19756503920442 35.0 18.0 39.0 7.0 40.0 36 28.458737310628518 35.0 16.0 39.0 7.0 40.0 37 28.206877418923316 35.0 15.0 39.0 7.0 40.0 38 28.04545067600641 35.0 15.0 39.0 7.0 40.0 39 27.7188622053588 34.0 15.0 38.0 7.0 40.0 40 27.59280912813871 34.0 15.0 39.0 7.0 40.0 41 27.27531109672045 33.0 15.0 38.0 7.0 40.0 42 27.345419969171555 34.0 12.0 39.0 7.0 40.0 43 27.251294399498963 34.0 12.0 38.0 7.0 40.0 44 27.240142649969446 34.0 11.0 39.0 7.0 40.0 45 27.320301170204033 34.0 10.0 39.0 7.0 40.0 46 27.10470726657485 34.0 10.0 38.0 7.0 40.0 47 26.979683324364505 34.0 10.0 38.0 7.0 40.0 48 26.868287440296488 34.0 10.0 38.0 7.0 40.0 49 27.001404609673564 34.0 10.0 38.0 7.0 40.0 50 26.972407932700346 34.0 10.0 38.0 7.0 40.0 51 26.060250762350382 32.0 10.0 37.0 7.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 13.0 9 20.0 10 37.0 11 40.0 12 72.0 13 85.0 14 134.0 15 226.0 16 404.0 17 855.0 18 1710.0 19 3082.0 20 5100.0 21 7600.0 22 11203.0 23 16264.0 24 24333.0 25 35574.0 26 43886.0 27 42151.0 28 34351.0 29 28947.0 30 27747.0 31 29268.0 32 33082.0 33 38526.0 34 45138.0 35 53418.0 36 59802.0 37 61711.0 38 46505.0 39 6549.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 22.76531769412952 2.18611382202805 29.882006706859176 45.16656177698325 2 44.863445793315634 13.311108881571949 28.84344682701107 12.981998498101344 3 10.404448538689092 13.635050787888739 62.75291334896037 13.207587324461795 4 8.901181757099815 2.4469699042615614 73.90314273813759 14.748705600501038 5 17.409863278577877 2.8639443993469476 64.96319740238418 14.762994919690986 6 11.41351769595369 11.430695281788415 67.3783963735532 9.777390648704689 7 47.10048431671212 0.8833535511998468 49.953787733683576 2.0623743984044607 8 46.63805762547998 8.033637665429271 42.758355451375266 2.5699492577154723 9 44.082549700988395 2.0584220335221346 41.808419753311625 12.050608512177845 10 25.06164169076089 13.067126357105288 49.52069975100101 12.35053220113281 11 20.227747425642335 14.951492321771145 51.898959311923676 12.921800940662841 12 14.199174867823796 13.920533143619817 56.25735367889163 15.62293830966475 13 14.019190251644032 14.618733601486088 60.775210767458056 10.586865379411828 14 13.529705062371358 18.863877513172017 54.419504008610076 13.186913415846552 15 11.287954103922875 14.36122182799916 60.94729065387317 13.4035334142048 16 12.405713295451436 16.516932843240088 53.32333080990037 17.754023051408105 17 12.779667818933044 16.820808897077377 56.71339578069847 13.686127503291104 18 14.215744397522778 15.520480850792145 55.12788940675003 15.135885344935044 19 13.492461624057134 17.663574701216415 52.617529650337325 16.226434024389132 20 15.525345299878085 16.724279985528266 56.88471559694391 10.865659117649741 21 14.855571466357775 20.24629313778248 53.95601321914039 10.942122176719355 22 13.959904778409143 13.563300163871128 56.0010580176762 16.475737040043537 23 13.895450828020442 19.261242197879707 54.91248552066327 11.93082145343658 24 15.038140321114446 16.285719497624022 53.493586527908256 15.182553653353278 25 12.575816999425388 22.746619967955443 51.638559271791976 13.0390037608272 26 13.455826241878649 15.378195715028411 54.83191808267739 16.334059960415544 27 15.812955852084265 17.158736094516247 51.74086471663064 15.287443336768849 28 11.398924348695871 18.316474976969875 54.81641265121596 15.468188023118296 29 14.894639073079228 16.395017588023727 51.285734699027415 17.424608639869632 30 13.374650747757034 21.389134644910417 52.591079208432525 12.645135398900026 31 15.429576458498648 18.92650729515349 49.244490251340004 16.39942599500786 32 16.050553787125626 21.546925212135584 48.35079974583253 14.051721254906251 33 17.590911992995192 17.985236397024174 44.03010485928061 20.393746750700025 34 16.30335312556055 20.286728870809352 43.5695023364557 19.840415667174394 35 15.480045117765274 23.770130458443926 42.90307281168197 17.84675161210883 36 19.486222968104418 23.853586163074574 37.07607086286206 19.58412000595895 37 16.583514990103886 26.769063319925696 39.50191081640657 17.145510873563847 38 21.025669089770368 25.225664833377415 36.67368971503449 17.074976361817722 39 20.454096322172465 23.78548387587142 35.731810760769434 20.02860904118668 40 21.228151782972603 22.53395233447952 40.0526576613553 16.18523822119258 41 20.76982947065673 24.864631502780338 34.96991642268414 19.39562260387879 42 18.446751004052693 23.780771440819418 40.563120787311085 17.209356767816804 43 22.560250762350382 22.01619253489482 35.42504644028737 19.99851026246743 44 20.891288683771286 23.76709017776521 34.83751219912622 20.50410893933728 45 18.709431254693435 22.85348583381218 35.942654225838126 22.49442868565626 46 21.9170793847688 24.28408990718023 34.08048231012687 19.718348397924096 47 17.71753968326356 22.63686583545393 40.745993670135626 18.899600811146886 48 19.360051319937856 24.49371725997744 33.97437651443981 22.17185490564489 49 18.187263048124603 22.403828321430634 38.95253209776327 20.456376532681496 50 19.30000577653329 21.8325595819006 37.05357278583959 21.813861855726522 51 18.73664176676791 21.737094768589035 34.72456577191206 24.801697692730993 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 34.0 1 968.5 2 1903.0 3 23012.5 4 44122.0 5 33501.0 6 22880.0 7 22085.0 8 21290.0 9 21189.5 10 21089.0 11 20598.5 12 20108.0 13 19501.0 14 18894.0 15 18367.5 16 17841.0 17 17003.0 18 16165.0 19 15317.0 20 14469.0 21 13490.5 22 12512.0 23 11856.0 24 11200.0 25 10684.5 26 9946.5 27 9724.0 28 9929.5 29 10135.0 30 10406.5 31 10678.0 32 11334.5 33 11991.0 34 13040.5 35 14090.0 36 14917.5 37 15745.0 38 16564.5 39 17384.0 40 18439.5 41 19495.0 42 20525.5 43 21556.0 44 23144.5 45 24733.0 46 52385.0 47 80037.0 48 57497.5 49 34958.0 50 32635.5 51 30313.0 52 27649.5 53 24986.0 54 24105.5 55 23225.0 56 21657.0 57 20089.0 58 18268.5 59 16448.0 60 14345.5 61 12243.0 62 10415.5 63 8588.0 64 7362.5 65 6137.0 66 5185.5 67 4234.0 68 3595.0 69 2956.0 70 2419.5 71 1883.0 72 1586.0 73 1289.0 74 1150.5 75 818.0 76 624.0 77 481.5 78 339.0 79 229.5 80 120.0 81 96.0 82 72.0 83 54.5 84 37.0 85 29.0 86 21.0 87 14.5 88 8.0 89 6.5 90 5.0 91 3.5 92 2.0 93 1.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 657834.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.26650259704098 #Duplication Level Percentage of deduplicated Percentage of total 1 82.97818947168906 46.68892513406552 2 7.741290251574197 8.711506560892952 3 3.5892038174002625 6.058558377391838 4 2.053205971209846 4.621068764453553 5 1.2161943868007874 3.4215502311716586 6 0.7395715046736319 2.4967861193049847 7 0.47089220330287307 1.8546820166047224 8 0.3004161176658185 1.3522691411869396 9 0.1885705693340588 0.9549185786244283 >10 0.6394693709681222 5.915566748692624 >50 0.04340927869553086 1.7244886845177652 >100 0.03494581555712285 3.5853865391251634 >500 0.0016380851042382249 0.5797450213645856 >1k 0.0019110992882779287 2.53050867433461 >5k 0.0 0.0 >10k+ 0.0010920567361588165 9.50403940826856 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 22558 3.4291325775195567 No Hit GAATCTGTCTCTTATACACATCTGACGCCAAAGCTGTCGTATGCCGTCTTC 15169 2.305900880769313 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCAAAGCTGTCGTATGCCG 13510 2.053709598470131 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCAAAGCTGTCGTATGC 10632 1.6162132088034367 No Hit GAACTGTCTCTTATACACATCTGACGCCAAAGCTGTCGTATGCCGTCTTCT 3487 0.5300729363334823 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCAAAGCTGTCGTATGCCGTC 2737 0.41606241088177265 No Hit GCTGTCTCTTATACACATCTGACGCCAAAGCTGTCGTATGCCGTCTTCTGC 2417 0.3674179200223765 TruSeq Adapter, Index 16 (95% over 21bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCAAAGCTGT 2386 0.36270548497037247 No Hit GAATGACTGTCTCTTATACACATCTGACGCCAAAGCTGTCGTATGCCGTCT 2091 0.31786134495936663 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCAAAGCTGTCGTA 1920 0.29186694515637684 No Hit GAATGCTGTCTCTTATACACATCTGACGCCAAAGCTGTCGTATGCCGTCTT 1435 0.21814013869760457 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCCAAAGCTGTCGT 878 0.13346832179546816 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 674 0.10245745887260312 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.044084069841327754 0.0 2 0.0 0.0 0.0 0.4695713508271084 0.0 3 0.0 0.0 0.0 0.5546992098310516 0.0 4 0.0 0.0 0.0 1.203343092634312 0.0 5 0.0 0.0 0.0 3.959965584022717 0.0 6 0.0 0.0 0.0 4.310053904176433 0.0 7 0.0 0.0 0.0 4.781297409376833 0.0 8 0.0 0.0 0.0 5.36943970667372 0.0 9 0.0 0.0 0.0 5.492267046093695 0.0 10 0.0 0.0 0.0 8.00673118142267 0.0 11 0.0 0.0 0.0 8.171666408242809 0.0 12 0.0 0.0 0.0 10.225071978645069 0.0 13 0.0 0.0 0.0 10.401256243976444 0.0 14 0.0 0.0 0.0 10.528948032482358 0.0 15 0.0 0.0 0.0 10.927984871563343 0.0 16 0.0 0.0 0.0 11.147341122532433 0.0 17 0.0 0.0 0.0 11.275488953140155 0.0 18 0.0 0.0 0.0 11.365329247196101 0.0 19 0.0 0.0 0.0 11.911363657092823 0.0 20 0.0 0.0 0.0 12.023093972035499 0.0 21 0.0 0.0 0.0 12.10898190120912 0.0 22 4.560421018068388E-4 0.0 0.0 12.278781577115199 0.0 23 4.560421018068388E-4 0.0 0.0 12.372878264121344 0.0 24 4.560421018068388E-4 0.0 0.0 12.455573898582317 0.0 25 4.560421018068388E-4 0.0 0.0 12.513643259545722 0.0 26 4.560421018068388E-4 0.0 0.0 12.605307722008895 0.0 27 4.560421018068388E-4 0.0 0.0 12.719470261494541 0.0 28 4.560421018068388E-4 0.0 0.0 12.80368603629487 0.0 29 4.560421018068388E-4 0.0 0.0 12.894286400520496 0.0 30 4.560421018068388E-4 0.0 0.0 12.995831775189485 0.0 31 4.560421018068388E-4 0.0 0.0 13.091448602534985 0.0 32 4.560421018068388E-4 0.0 0.0 13.210323577072636 0.0 33 4.560421018068388E-4 0.0 0.0 13.321901877981375 0.0 34 4.560421018068388E-4 0.0 0.0 13.451265820860582 0.0 35 4.560421018068388E-4 0.0 0.0 13.576373370789591 0.0 36 4.560421018068388E-4 0.0 0.0 13.700568836514988 0.0 37 6.080561357424517E-4 0.0 0.0 13.828108610986966 0.0 38 6.080561357424517E-4 0.0 0.0 13.967809508173795 0.0 39 6.080561357424517E-4 0.0 0.0 14.15889114883086 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACTACCG 40 6.8066583E-9 45.000004 14 ATACGTC 30 2.1640808E-6 45.000004 6 GGCGAAC 20 7.031083E-4 45.000004 32 TCGATCA 25 3.8889797E-5 45.0 17 TAGGGTA 35 1.2108649E-7 45.0 5 CGTTTTT 22855 0.0 44.24196 1 CGATGAA 500 0.0 43.649998 19 CCGATGA 500 0.0 42.749996 18 GATACCT 1595 0.0 42.319748 5 ACGGCTG 1475 0.0 41.79661 8 TGATACC 1610 0.0 41.785717 4 GTTTGCG 65 0.0 41.53846 1 CGGCTGT 1490 0.0 41.22483 9 GAATCTG 1845 0.0 41.219513 1 AATCTGT 1870 0.0 40.78877 2 TACGGCT 1510 0.0 40.5298 7 CGGGTAC 50 1.0804797E-9 40.5 6 CGACCTG 140 0.0 40.17857 12 CTACCGA 45 1.9261279E-8 40.0 15 ATACCTG 1700 0.0 39.97059 6 >>END_MODULE