##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933355.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 392846 Sequences flagged as poor quality 0 Sequence length 51 %GC 35 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.830078453134306 31.0 28.0 31.0 16.0 33.0 2 29.17644318638856 31.0 30.0 33.0 16.0 34.0 3 29.295813117608425 31.0 30.0 33.0 16.0 34.0 4 32.449725846769475 35.0 32.0 37.0 19.0 37.0 5 33.834841133675795 35.0 33.0 37.0 30.0 37.0 6 33.1166793094495 35.0 33.0 37.0 25.0 37.0 7 32.49272488456036 35.0 32.0 37.0 26.0 37.0 8 33.31934905790055 35.0 33.0 37.0 28.0 37.0 9 33.36107278679177 35.0 32.0 38.0 25.0 39.0 10 32.162035505007054 35.0 28.0 39.0 15.0 39.0 11 32.87483899543332 37.0 30.0 39.0 17.0 39.0 12 33.63447254140299 37.0 31.0 39.0 25.0 39.0 13 33.91844132306298 37.0 32.0 39.0 25.0 39.0 14 34.097707498612685 37.0 32.0 40.0 22.0 41.0 15 34.64898458938108 37.0 32.0 40.0 25.0 41.0 16 34.75674946416662 37.0 32.0 40.0 25.0 41.0 17 32.83794158525224 36.0 29.0 40.0 18.0 41.0 18 33.40712900220443 36.0 31.0 39.0 23.0 39.0 19 33.06987470917357 36.0 31.0 37.0 23.0 39.0 20 32.540242232325134 35.0 31.0 36.0 25.0 39.0 21 32.733004790681335 35.0 31.0 37.0 24.0 39.0 22 32.732365863468125 34.0 30.0 37.0 25.0 39.0 23 33.822971342459894 35.0 32.0 38.0 27.0 40.0 24 31.98588250866752 34.0 30.0 37.0 21.0 39.0 25 31.173004179754916 34.0 28.0 36.0 18.0 39.0 26 30.140113428671796 33.0 25.0 36.0 18.0 39.0 27 32.056971434098855 34.0 30.0 37.0 22.0 39.0 28 32.13043279045733 35.0 31.0 37.0 21.0 39.0 29 32.15791938825901 35.0 30.0 38.0 21.0 40.0 30 31.15548586468998 34.0 28.0 37.0 18.0 39.0 31 31.47199666026891 34.0 30.0 37.0 19.0 39.0 32 31.139891967844907 35.0 30.0 37.0 16.0 39.0 33 30.63453108851815 35.0 27.0 38.0 12.0 40.0 34 29.336348085509336 35.0 23.0 38.0 8.0 40.0 35 28.48087036650494 34.0 21.0 37.0 7.0 40.0 36 27.713050406520622 33.0 18.0 37.0 7.0 40.0 37 27.686760206289488 34.0 17.0 37.0 7.0 40.0 38 27.72049098119874 33.0 17.0 38.0 7.0 40.0 39 27.44620029222647 33.0 17.0 37.0 7.0 40.0 40 27.277940974325816 33.0 15.0 37.0 7.0 40.0 41 26.927597582767802 33.0 15.0 37.0 7.0 40.0 42 27.19986457797712 33.0 15.0 37.0 7.0 40.0 43 27.232785875381193 33.0 15.0 38.0 7.0 40.0 44 27.094752142060756 33.0 15.0 38.0 7.0 40.0 45 27.29084424940053 33.0 15.0 38.0 7.0 40.0 46 27.04708460821798 33.0 15.0 38.0 7.0 40.0 47 27.013674569678702 33.0 15.0 38.0 7.0 40.0 48 26.827115460002137 33.0 15.0 37.0 7.0 40.0 49 26.564307642180395 33.0 12.0 37.0 7.0 39.0 50 26.746872820392724 33.0 14.0 37.0 7.0 40.0 51 25.414091017854325 31.0 12.0 35.0 7.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 5.0 9 13.0 10 23.0 11 27.0 12 34.0 13 55.0 14 103.0 15 205.0 16 395.0 17 841.0 18 1591.0 19 2563.0 20 4036.0 21 5949.0 22 8097.0 23 11443.0 24 15990.0 25 21649.0 26 26106.0 27 24853.0 28 22262.0 29 21345.0 30 22926.0 31 25627.0 32 28568.0 33 32667.0 34 35659.0 35 37586.0 36 26064.0 37 13298.0 38 2829.0 39 35.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 19.394622829302065 2.1654796026941856 32.70950957881714 45.7303879891866 2 46.76412640067609 9.553107324498658 30.795273465938305 12.887492808886943 3 10.905545684568507 9.574489749163796 66.37970095151789 13.1402636147498 4 9.686238373306589 2.511416687455135 72.34972482855878 15.452620110679502 5 15.539422572712972 2.8899365145629585 66.82949552750951 14.741145385214564 6 12.102706913141537 8.482204222519767 68.4247771391334 10.990311725205297 7 48.21456754046115 0.9018801260544844 48.507812221583016 2.3757401119013557 8 49.5906792992674 5.861075332318517 41.724492549243216 2.823752819170871 9 46.175600617035684 2.034384975282935 41.67816396246876 10.111850445212628 10 24.819394877381974 13.884321082561616 48.726218416376895 12.570065623679508 11 19.469970420979212 15.468656929178353 52.239045325649236 12.822327324193195 12 14.69939874658263 14.14269204726534 56.16679309449505 14.991116111656986 13 14.006251813687806 14.903040886250594 59.83438802991503 11.256319270146571 14 13.503510281382528 16.22187829327523 55.83511095951085 14.439500465831395 15 11.774843068276118 14.480228893764988 59.93519088905067 13.809737148908225 16 12.996695906283886 14.874530986697076 54.31364962351659 17.81512348350244 17 13.131099718464743 15.721682287715796 56.74920961394542 14.398008379874048 18 14.416845277793334 14.474374182249534 55.298768474160354 15.810012065796775 19 14.06301706012025 17.408348309515688 52.649893342429344 15.87874128793471 20 15.477820825463413 16.68669147706735 56.182829912993896 11.652657784475341 21 15.530004123753328 18.75264098399882 53.298748109946395 12.418606782301461 22 14.392408221033179 14.406663170809935 55.03632466666327 16.164603941493613 23 14.288805282477101 18.53627121060161 53.81014443318756 13.364779073733729 24 14.480228893764988 16.15773101927982 53.8686915483421 15.493348538613095 25 13.438853902037948 19.43433304653732 52.10744159288881 15.019371458535916 26 13.69289747127373 16.198968552562583 54.23397463637151 15.874159339792183 27 14.534194060776997 16.99419110796597 52.421050487977475 16.050564343279554 28 12.058923853112926 17.988982960243963 54.63744062558865 15.314652561054459 29 14.826929636549691 16.23791511177408 51.74852232172403 17.186632929952196 30 13.939813565621135 19.17443476578608 52.8436079277885 14.042143740804287 31 15.027771696797219 18.284518615437094 50.326845634167086 16.36086405359861 32 15.592624081701226 19.874454620894703 49.854141317462826 14.67877997994125 33 16.172495074405745 17.690392672955817 46.50117348782984 19.635938764808603 34 15.956379853683123 20.11322502965539 44.90945561365013 19.02093950301136 35 15.06493638728662 23.204767262489625 43.19911619311384 18.53118015710991 36 18.15138756662916 23.03421697051771 39.109472923232005 19.704922539621123 37 16.891606380108236 25.294644720832082 40.30027033494041 17.51347856411927 38 20.153189799565226 23.721763744571664 39.3920263920213 16.73302006384181 39 19.619647393635166 22.62973277060222 38.044424532768566 19.706195302994047 40 20.90030189947206 21.450644781924723 41.019127087968315 16.629926230634908 41 20.09184260499025 22.82090182921552 37.886601874525894 19.200653691268336 42 18.484597017660864 22.539366571124564 41.575070129261846 17.400966281952723 43 21.055833583643462 21.131944833344363 38.15388218284009 19.65833940017208 44 20.10584300209242 22.648569668521507 37.344404677659945 19.90118265172612 45 18.448705090544387 21.950331682134987 38.00547797355706 21.59548525376356 46 20.467307800003056 23.00494341294044 36.427760496479536 20.09998829057697 47 17.69752014784419 21.425444067140813 41.71736507435483 19.159670710660155 48 18.753659194697157 22.611404978032105 36.93228389750691 21.702651929763825 49 17.767522133355055 21.567993564908384 39.6931622060553 20.97132209568126 50 18.732785875381193 20.62029395742861 38.81393726803887 21.83298289915132 51 18.441068510306838 20.457634798368826 37.32098583159813 23.780310859726203 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 63.0 1 315.0 2 567.0 3 18589.5 4 36612.0 5 25097.0 6 13582.0 7 12938.0 8 12294.0 9 12218.0 10 12142.0 11 11829.0 12 11516.0 13 11014.5 14 10513.0 15 10184.5 16 9856.0 17 9247.5 18 8639.0 19 8016.5 20 7394.0 21 7040.0 22 6686.0 23 6342.5 24 5999.0 25 5632.5 26 5192.0 27 5118.0 28 5220.5 29 5323.0 30 5562.0 31 5801.0 32 6067.0 33 6333.0 34 7002.0 35 7671.0 36 8323.0 37 8975.0 38 9459.0 39 9943.0 40 10575.0 41 11207.0 42 12061.0 43 12915.0 44 13869.5 45 14824.0 46 25133.0 47 35442.0 48 29640.5 49 23839.0 50 22446.5 51 21054.0 52 18799.0 53 16544.0 54 15500.5 55 14457.0 56 13315.0 57 12173.0 58 11278.0 59 10383.0 60 9276.5 61 8170.0 62 7050.5 63 5931.0 64 5236.5 65 4542.0 66 4024.5 67 3507.0 68 2988.0 69 2469.0 70 2058.0 71 1647.0 72 1405.5 73 1164.0 74 1086.0 75 847.5 76 687.0 77 507.0 78 327.0 79 227.0 80 127.0 81 94.5 82 62.0 83 48.0 84 34.0 85 26.0 86 18.0 87 13.5 88 9.0 89 9.0 90 9.0 91 5.5 92 2.0 93 2.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 392846.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.856479801066584 #Duplication Level Percentage of deduplicated Percentage of total 1 83.43790155484156 49.10861167505914 2 8.229088057017062 9.68670310018046 3 3.4868054365031447 6.156632812313894 4 1.8786805115151441 4.422900863145942 5 1.012814747718282 2.9805355370651707 6 0.6356982106900636 2.2448975338232335 7 0.34972857304677896 1.440865488676851 8 0.23044185268083558 1.085039699810397 9 0.1510135800686226 0.7999314952496074 >10 0.5038773781937802 5.064658420467059 >50 0.046590106590734134 1.92026684167417 >100 0.03340422736687343 3.691786083455515 >500 0.0013185879223765826 0.6141335689246299 >1k 0.0017581172298354434 2.7281603276660267 >5k 4.3952930745886086E-4 1.5379208370922177 >10k+ 4.3952930745886086E-4 6.516955715395651 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 25192 6.4126909781441075 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCAAAGCTGTCGTATGCCG 5945 1.513315650407539 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCAAAGCTGTCGTATGC 4097 1.0429023077745478 No Hit GAATCTGTCTCTTATACACATCTGACGCCAAAGCTGTCGTATGCCGTCTTC 4026 1.0248290678790162 No Hit GAACTGTCTCTTATACACATCTGACGCCAAAGCTGTCGTATGCCGTCTTCT 1260 0.32073636997703936 No Hit GCTGTCTCTTATACACATCTGACGCCAAAGCTGTCGTATGCCGTCTTCTGC 1163 0.296044760542299 TruSeq Adapter, Index 16 (95% over 21bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCAAAGCTGT 999 0.2542981219103669 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCAAAGCTGTCGTATGCCGTC 783 0.19931474420001732 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCAAAGCTGTCGTA 592 0.15069518335429152 No Hit GAATGACTGTCTCTTATACACATCTGACGCCAAAGCTGTCGTATGCCGTCT 487 0.12396715252287155 No Hit GAATGATACCTGTCTCTTCTACACATCTGACGCCAAAGCTGTCGTATGCCG 482 0.1226943891499468 No Hit GAATGCTGTCTCTTATACACATCTGACGCCAAAGCTGTCGTATGCCGTCTT 453 0.1153123615869832 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCAAAGCTGTCGTATGCC 434 0.11047586076986911 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 426 0.1084394393731895 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.07152930155837148 0.0 2 0.0 0.0 0.0 0.48823202985393765 0.0 3 0.0 0.0 0.0 0.6241631580823019 0.0 4 0.0 0.0 0.0 1.226180233475713 0.0 5 0.0 0.0 0.0 2.6850216115220724 0.0 6 0.0 0.0 0.0 3.1477983739175146 0.0 7 0.0 0.0 0.0 3.5930110017665955 0.0 8 0.0 0.0 0.0 4.163972650860643 0.0 9 0.0 0.0 0.0 4.460017411402942 0.0 10 0.0 0.0 0.0 6.5567677919591905 0.0 11 0.0 0.0 0.0 7.064854930430754 0.0 12 0.0 0.0 0.0 8.635444932619906 0.0 13 0.0 0.0 0.0 8.870906156610987 0.0 14 0.0 0.0 0.0 8.9908004663405 0.0 15 0.0 0.0 0.0 9.312045941666709 0.0 16 0.0 0.0 0.0 9.500669473534158 0.0 17 0.0 0.0 0.0 9.692856742845796 0.0 18 0.0 0.0 0.0 9.887589538903285 0.0 19 0.0 0.0 0.0 10.363093935027976 0.0 20 0.0 0.0 0.0 10.543062675959536 0.0 21 2.545526745849519E-4 0.0 0.0 10.727104259684456 0.0 22 2.545526745849519E-4 0.0 0.0 10.990057172530712 0.0 23 2.545526745849519E-4 0.0 0.0 11.200317681737882 0.0 24 2.545526745849519E-4 0.0 0.0 11.379522764645689 0.0 25 2.545526745849519E-4 0.0 0.0 11.532254369396659 0.0 26 2.545526745849519E-4 0.0 0.0 11.691349791012254 0.0 27 2.545526745849519E-4 0.0 0.0 11.856809029492473 0.0 28 2.545526745849519E-4 0.0 0.0 12.00877697621969 0.0 29 2.545526745849519E-4 0.0 0.0 12.176781741445758 0.0 30 2.545526745849519E-4 0.0 0.0 12.371005432154076 0.0 31 2.545526745849519E-4 0.0 0.0 12.542319382149747 0.0 32 2.545526745849519E-4 0.0 0.0 12.738579494254747 0.0 33 2.545526745849519E-4 0.0 0.0 12.913457181694609 0.0 34 2.545526745849519E-4 0.0 0.0 13.093425922626169 0.0 35 2.545526745849519E-4 0.0 0.0 13.304450089857093 0.0 36 2.545526745849519E-4 0.0 0.0 13.478055013924031 0.0 37 2.545526745849519E-4 0.0 0.0 13.669478625211916 0.0 38 2.545526745849519E-4 0.0 0.0 13.896794163616278 0.0 39 2.545526745849519E-4 0.0 0.0 14.184438685897273 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGTCT 40 6.7957444E-9 45.0 6 ACGGGCG 20 7.0276106E-4 45.0 5 GAGATCG 20 7.0276106E-4 45.0 20 CGTTTTT 14805 0.0 44.574467 1 TACGGCT 500 0.0 42.3 7 CCGGGAT 80 0.0 42.1875 5 CACCGGT 70 0.0 41.785713 16 CGACCAC 460 0.0 41.576084 12 TGATACC 700 0.0 41.464287 4 TATGGGC 60 3.6379788E-12 41.249996 4 TGCGGGC 170 0.0 41.02941 4 TCGGGAC 55 6.002665E-11 40.909092 5 GCGACCA 470 0.0 40.69149 11 ACGGCTG 520 0.0 40.67308 8 GTTTTTT 16325 0.0 40.658497 2 GAATGAT 2235 0.0 40.57047 1 GATACCT 710 0.0 40.563377 5 ATACGGC 1305 0.0 40.344826 6 AATGATA 2025 0.0 40.333332 2 ATGATAC 2035 0.0 40.245697 3 >>END_MODULE