##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933354.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 568350 Sequences flagged as poor quality 0 Sequence length 51 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.524250901733087 31.0 28.0 33.0 25.0 34.0 2 28.920065100730184 31.0 28.0 33.0 16.0 34.0 3 28.979019970088853 31.0 28.0 34.0 16.0 34.0 4 33.154619512624265 35.0 32.0 37.0 28.0 37.0 5 34.16874989003255 35.0 33.0 37.0 30.0 37.0 6 33.787199788862495 35.0 33.0 37.0 28.0 37.0 7 33.33350928125275 35.0 32.0 37.0 28.0 37.0 8 33.59069059558371 35.0 33.0 37.0 28.0 37.0 9 34.500543679070994 37.0 34.0 39.0 27.0 39.0 10 34.1728917040556 37.0 32.0 39.0 27.0 39.0 11 34.47050409078913 37.0 33.0 39.0 27.0 39.0 12 34.56794228908243 37.0 33.0 39.0 27.0 39.0 13 34.8007530570951 37.0 34.0 39.0 27.0 39.0 14 35.591385589865396 38.0 34.0 40.0 27.0 41.0 15 35.990384446203926 38.0 34.0 40.0 27.0 41.0 16 35.80386909474795 38.0 34.0 40.0 27.0 41.0 17 35.1937045834433 37.0 33.0 40.0 27.0 41.0 18 34.97163191695258 37.0 33.0 39.0 27.0 40.0 19 34.381073282308435 37.0 32.0 38.0 27.0 40.0 20 34.1187050233131 35.0 32.0 38.0 27.0 40.0 21 34.358441101433975 35.0 33.0 39.0 27.0 40.0 22 34.98999032286443 36.0 33.0 39.0 29.0 40.0 23 35.40475235330342 36.0 34.0 39.0 30.0 40.0 24 34.84657165479018 36.0 33.0 39.0 28.0 40.0 25 33.766847893023666 35.0 33.0 39.0 24.0 40.0 26 33.92359813495205 35.0 33.0 39.0 25.0 40.0 27 34.6311744523621 35.0 33.0 39.0 27.0 40.0 28 34.48740036949063 35.0 33.0 39.0 25.0 40.0 29 34.6337344945896 36.0 33.0 39.0 25.0 40.0 30 33.878397114454124 35.0 33.0 39.0 23.0 40.0 31 33.81566464326559 35.0 33.0 39.0 23.0 40.0 32 33.40187912377936 35.0 33.0 39.0 21.0 40.0 33 33.13490102929533 36.0 33.0 39.0 18.0 41.0 34 32.82290665962875 36.0 32.0 40.0 15.0 41.0 35 32.47046538224686 36.0 32.0 40.0 10.0 41.0 36 31.955754376704494 36.0 31.0 40.0 10.0 41.0 37 31.935742060350137 36.0 31.0 40.0 9.0 41.0 38 31.66143045658485 36.0 30.0 40.0 9.0 41.0 39 31.310519926101875 35.0 29.0 39.0 8.0 40.0 40 31.181094396058768 35.0 29.0 39.0 8.0 40.0 41 30.727224421571215 35.0 26.0 39.0 8.0 40.0 42 30.964280812879387 35.0 27.0 39.0 8.0 40.0 43 30.841048649599717 35.0 27.0 39.0 8.0 40.0 44 30.912504618632884 35.0 27.0 39.0 7.0 40.0 45 31.026469604996922 36.0 28.0 39.0 7.0 40.0 46 30.839992962083222 35.0 27.0 39.0 7.0 40.0 47 30.83909914665259 35.0 27.0 39.0 7.0 40.0 48 30.659890912289963 35.0 27.0 39.0 7.0 40.0 49 30.867812087622063 35.0 27.0 39.0 7.0 40.0 50 30.886983372921616 35.0 27.0 39.0 7.0 40.0 51 29.75648807952846 34.0 24.0 38.0 7.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 11.0 9 23.0 10 36.0 11 27.0 12 56.0 13 75.0 14 109.0 15 162.0 16 238.0 17 478.0 18 985.0 19 1760.0 20 2822.0 21 4227.0 22 5999.0 23 8467.0 24 12092.0 25 17689.0 26 22587.0 27 24351.0 28 23900.0 29 23285.0 30 24546.0 31 28200.0 32 33705.0 33 39992.0 34 46065.0 35 55031.0 36 62580.0 37 67542.0 38 53434.0 39 7875.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.33694026568136 2.715228292425442 37.877188352247735 35.070643089645465 2 33.299903228644325 13.340547198029384 37.531450690595584 15.828098882730712 3 13.30289434327439 13.440661564177002 56.75270519926102 16.503738893287586 4 12.111375032990235 3.153866455529163 66.06369314682854 18.671065364652062 5 19.58722618105041 3.781472684085511 57.24131257147884 19.389988563385238 6 15.822820445148237 11.532682326031495 60.2908419107944 12.353655318025865 7 60.88501803466174 1.2849476554939738 35.19591800826955 2.6341163015747338 8 60.40520805841471 7.847980997624703 28.744435647048473 3.0023752969121142 9 56.84085510688837 2.9999120260402923 28.036245271399668 12.122987595671681 10 33.40054543855019 20.404856162575875 34.2586434415413 11.93595495733263 11 24.394651183249756 17.736781912553884 42.52291721650391 15.345649687692442 12 20.027975719187122 15.80997624703088 45.83390516407144 18.328142869710565 13 18.74936218879212 16.33975543239201 50.507961643353575 14.402920735462303 14 16.358581859769508 20.69024368786839 45.38541391748043 17.565760534881676 15 14.559162487903581 17.05903052696402 51.88932875868743 16.492478226444973 16 17.362892583795198 18.869886513591975 43.535849388580985 20.231371514031846 17 17.370106448491246 18.514999560130203 46.611946863728335 17.502947127650216 18 17.227060790006156 18.190199700888538 45.755080496173136 18.82765901293217 19 17.158617049353392 20.09465998064573 43.11339843406351 19.633324535937362 20 18.779273335092814 20.722794052960325 46.20568311779713 14.292249494149731 21 18.70379167766341 22.301926629717602 44.2852115773731 14.709070115245886 22 17.21544822732471 16.683381719011173 46.29823172340987 19.802938330254243 23 17.604820972991995 20.978974223629805 46.02498460455705 15.391220198821149 24 19.111463006949943 18.382158880971232 43.63191695258203 18.87446115949679 25 16.675815958476292 24.33799595319785 41.23814550892936 17.748042579396497 26 16.50655405999824 18.01900237529691 44.09589161608164 21.378551948623205 27 18.34274654702208 18.897158441101432 43.12641858010029 19.633676431776195 28 14.97070467141726 19.61467405647928 45.21720770651887 20.197413565584586 29 18.167326471364476 18.195302190551597 42.36474003694906 21.272631301134865 30 17.361660948359287 19.98944312483505 45.986100114366145 16.66279581243952 31 21.425354095187824 18.675640010556876 40.83328934635348 19.065716547901822 32 20.64907187472508 23.093164423330695 39.43379959531978 16.82396410662444 33 18.758863376440573 19.36271663587578 38.03747690683558 23.840943080848067 34 19.115333861177092 21.101961819301486 38.150083575261725 21.632620744259697 35 16.63094923902525 22.95416556699217 41.29937538488607 19.115509809096505 36 20.093780241048652 22.777337907979238 36.86320049265417 20.265681358317938 37 18.097123251517548 25.69490630773291 38.536993050057184 17.670977390692354 38 21.290050145157032 23.30254244743556 34.120700272719276 21.286707134688132 39 20.73053576141462 24.478050497052873 33.71883522477347 21.072578516759037 40 19.608691827219143 22.84296648192135 37.62083223365884 19.927509457200667 41 18.595583707222662 24.734230667722354 35.04917744347673 21.62100818157825 42 18.146916512712238 23.419371865927687 38.59593560306149 19.837776018298584 43 20.010029031406702 22.04451482361221 35.41426937626462 22.53118676871646 44 20.687428521157738 22.383918360165392 34.09008533474092 22.838567783935957 45 19.028415588985663 22.102401689100027 34.11964458520278 24.749538136711532 46 22.158353127474268 24.198117357262248 33.21720770651887 20.42632180874461 47 16.683205771091757 22.36438814111023 40.32040116125627 20.632004926541743 48 19.109703527755784 24.057534969648984 33.859417612386736 22.973343890208497 49 18.128793877012402 22.35717427641418 38.71206122987596 20.801970616697457 50 18.807073106360516 21.477082783496083 37.20577109175684 22.51007301838656 51 18.23717779537257 21.917480425793965 34.71082959444004 25.134512184393422 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 37.0 1 771.0 2 1505.0 3 17097.0 4 32689.0 5 23937.5 6 15186.0 7 14180.0 8 13174.0 9 12750.5 10 12327.0 11 11656.5 12 10986.0 13 10166.0 14 9346.0 15 8605.0 16 7864.0 17 7362.5 18 6861.0 19 6338.5 20 5816.0 21 5512.5 22 5209.0 23 5094.5 24 4980.0 25 5286.5 26 6007.5 27 6422.0 28 6996.0 29 7570.0 30 8567.0 31 9564.0 32 10249.5 33 10935.0 34 12340.0 35 13745.0 36 14574.5 37 15404.0 38 16266.0 39 17128.0 40 18112.0 41 19096.0 42 20129.5 43 21163.0 44 22875.5 45 24588.0 46 48274.0 47 71960.0 48 53226.5 49 34493.0 50 32716.0 51 30939.0 52 28516.5 53 26094.0 54 25544.0 55 24994.0 56 24323.5 57 23653.0 58 22631.0 59 21609.0 60 19448.5 61 17288.0 62 15209.5 63 13131.0 64 11461.0 65 9791.0 66 7965.0 67 6139.0 68 5069.5 69 4000.0 70 3322.0 71 2644.0 72 2230.5 73 1817.0 74 1491.0 75 971.5 76 778.0 77 549.5 78 321.0 79 256.0 80 191.0 81 138.5 82 86.0 83 56.5 84 27.0 85 25.0 86 23.0 87 16.0 88 9.0 89 6.5 90 4.0 91 2.5 92 1.0 93 1.0 94 1.0 95 2.5 96 4.0 97 2.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 568350.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.027999702958525 #Duplication Level Percentage of deduplicated Percentage of total 1 77.00914425752865 38.526134460407334 2 8.382751573501348 8.387445864582013 3 4.76236342242749 7.14754547647749 4 3.238546020800906 6.4807191746658095 5 2.166789604758656 5.4200074851619835 6 1.4784892313266023 4.437951529538078 7 0.9637297048878168 3.374942857290201 8 0.6281624996377035 2.514057067622778 9 0.39790308992030043 1.7915666097905167 >10 0.8994482492998884 6.885760407859041 >50 0.04116906320864735 1.423098111650679 >100 0.0268493886665334 2.380725269473853 >500 7.159836977742232E-4 0.22906399004416286 >1k 0.0025059429422097813 2.5120027555585835 >5k 3.579918488871116E-4 1.4890054833676074 >10k+ 0.0010739755466613347 6.999973456509855 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15148 2.66525908331134 No Hit GAATCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTC 13660 2.4034485792205507 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCG 10277 1.8082167678367203 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGC 8314 1.462831002023401 No Hit GAACTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTCT 3272 0.5757015923286707 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTC 2299 0.4045042667370458 No Hit GCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTCTGC 2083 0.3664995161432216 TruSeq Adapter, Index 13 (95% over 21bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCTGACCTTT 1808 0.31811383830386203 No Hit GAATGACTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCT 1639 0.28837863992258295 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCTGACCTTTCGTA 1634 0.2874989003255036 No Hit GAATGCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTT 1291 0.2271487639658661 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCCTGACCTTTCGT 754 0.13266473123955308 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.05049705287234978 0.0 2 0.0 0.0 0.0 0.48332893463534793 0.0 3 0.0 0.0 0.0 0.5827395091053048 0.0 4 0.0 0.0 0.0 1.2902260930764493 0.0 5 0.0 0.0 0.0 4.187912377936131 0.0 6 0.0 0.0 0.0 4.579748394475235 0.0 7 0.0 0.0 0.0 5.042315474619513 0.0 8 0.0 0.0 0.0 5.640010556875165 0.0 9 0.0 0.0 0.0 5.796076361397026 0.0 10 0.0 0.0 0.0 8.07037916776634 0.0 11 0.0 0.0 0.0 8.261282660332542 0.0 12 0.0 0.0 0.0 10.149203835664643 0.0 13 0.0 0.0 0.0 10.329550453065892 0.0 14 0.0 0.0 0.0 10.467845517726753 0.0 15 0.0 0.0 0.0 10.874637107416206 0.0 16 0.0 0.0 0.0 11.09122899621712 0.0 17 0.0 0.0 0.0 11.206122987595672 0.0 18 0.0 0.0 0.0 11.296736166094837 0.0 19 0.0 0.0 0.0 11.795548517638778 0.0 20 0.0 0.0 0.0 11.920471540424035 0.0 21 0.0 0.0 0.0 12.019178323216329 0.0 22 0.0 0.0 0.0 12.21553620128442 0.0 23 0.0 0.0 0.0 12.33430104689012 0.0 24 0.0 0.0 0.0 12.43529515263482 0.0 25 0.0 0.0 0.0 12.525908331133984 0.0 26 0.0 0.0 0.0 12.63939473915721 0.0 27 0.0 0.0 0.0 12.806193366763438 0.0 28 0.0 0.0 0.0 12.914049441365355 0.0 29 0.0 0.0 0.0 13.039324359989443 0.0 30 0.0 0.0 0.0 13.192574997800651 0.0 31 0.0 0.0 0.0 13.31820181226357 0.0 32 0.0 0.0 0.0 13.465294272895223 0.0 33 3.5189583883170583E-4 0.0 0.0 13.599014691651272 0.0 34 3.5189583883170583E-4 0.0 0.0 13.76792469429049 0.0 35 3.5189583883170583E-4 0.0 0.0 13.94827131169174 0.0 36 3.5189583883170583E-4 0.0 0.0 14.119820533122196 0.0 37 3.5189583883170583E-4 0.0 0.0 14.295944400457465 0.0 38 3.5189583883170583E-4 0.0 0.0 14.50655405999824 0.0 39 3.5189583883170583E-4 0.0 0.0 14.834872877628221 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATTGCG 40 6.8048394E-9 45.000004 1 TCCGTCT 20 7.0302724E-4 45.000004 7 CCCGATC 40 6.8048394E-9 45.000004 41 CGTTTTT 11460 0.0 44.05759 1 CCGATGA 310 0.0 42.82258 18 CACGACC 90 0.0 42.5 27 CGATGAA 315 0.0 42.142857 19 TGATACC 1195 0.0 41.799164 4 GATACCT 1185 0.0 41.772156 5 TACGGCT 920 0.0 40.84239 7 TTAGCGG 50 1.0786607E-9 40.5 2 TACCGGG 50 1.0786607E-9 40.5 3 ATACCTG 1230 0.0 40.2439 6 ACGGCTG 935 0.0 40.18717 8 AGGCACG 45 1.9254003E-8 40.0 10 GAATCTG 1720 0.0 39.898254 1 CGTTCAT 40 3.4541154E-7 39.375004 17 ATGATAC 3780 0.0 39.166668 3 GAATGAT 3970 0.0 38.992447 1 AATGATC 295 0.0 38.898304 2 >>END_MODULE