SRR2933352.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933352.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	698777
Sequences flagged as poor quality	0
Sequence length	51
%GC	39

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	22654	3.2419498638335265	No Hit
GAATCTGTCTCTTATACACATCTGACGCACGCTGAATCGTATGCCGTCTTC	16396	2.346385184400746	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCACGCTGAATCGTATGCCG	12691	1.816173113883256	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCACGCTGAATCGTATGC	12013	1.7191464515861283	No Hit
GAACTGTCTCTTATACACATCTGACGCACGCTGAATCGTATGCCGTCTTCT	4271	0.6112107296032926	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCACGCTGAATCGTATGCCGTC	2810	0.4021311519984201	No Hit
GCTGTCTCTTATACACATCTGACGCACGCTGAATCGTATGCCGTCTTCTGC	2412	0.34517449772960473	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCACGCTGAAT	2341	0.33501388855099695	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCACGCTGAATCGTA	2268	0.32456706502932986	No Hit
GAATGACTGTCTCTTATACACATCTGACGCACGCTGAATCGTATGCCGTCT	2055	0.2940852374935065	No Hit
GAATGCTGTCTCTTATACACATCTGACGCACGCTGAATCGTATGCCGTCTT	1513	0.21652115052441623	No Hit
GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCACGCTGAATCGT	927	0.1326603480080197	No Hit
GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG	859	0.12292906034400103	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTATAC	25	3.8892293E-5	45.000004	32
CGTTTTT	17560	0.0	44.24402	1
CCGATGA	385	0.0	43.246754	18
ACGGCTG	1410	0.0	42.60638	8
TACGGCT	1435	0.0	42.1777	7
GATACCT	1545	0.0	41.359222	5
CGGCTGT	1480	0.0	40.743244	9
TGATACC	1565	0.0	40.6869	4
AATCTGT	1865	0.0	40.294907	2
GAATCTG	1870	0.0	40.187164	1
CACCGGT	90	0.0	40.0	16
CGATGAA	400	0.0	39.937504	19
ATACCTG	1600	0.0	39.937504	6
ATGATAC	4910	0.0	39.82179	3
AATGATA	4870	0.0	39.686855	2
CGACCAC	1180	0.0	39.661015	12
ACCACCG	715	0.0	39.65035	14
GAATGAT	5190	0.0	39.62428	1
ATACGGC	3440	0.0	39.309597	6
TTGCTCG	75	0.0	39.0	1