SRR2933351.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933351.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	531381
Sequences flagged as poor quality	0
Sequence length	51
%GC	38

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	35639	6.706863813346732	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCACGCTGAATCGTATGCCG	5357	1.0081278781138203	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCACGCTGAATCGTATGC	4750	0.893897222520188	No Hit
GAATCTGTCTCTTATACACATCTGACGCACGCTGAATCGTATGCCGTCTTC	4660	0.8769602225145423	No Hit
GAACTGTCTCTTATACACATCTGACGCACGCTGAATCGTATGCCGTCTTCT	1717	0.323120322329929	No Hit
GCTGTCTCTTATACACATCTGACGCACGCTGAATCGTATGCCGTCTTCTGC	1114	0.209642422292103	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCACGCTGAAT	1072	0.20173848895613505	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCACGCTGAATCGTATGCCGTC	853	0.1605251222757306	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCACGCTGAATCGTA	723	0.1360605667120202	No Hit
GAATGCTGTCTCTTATACACATCTGACGCACGCTGAATCGTATGCCGTCTT	536	0.10086924447806753	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTCGTAA	30	2.1632895E-6	45.000004	33
GTATCGG	20	7.029857E-4	45.000004	2
CGTTTTT	14775	0.0	44.36041	1
GATACCT	640	0.0	41.48438	5
TACGGCT	555	0.0	41.351353	7
AGGCACG	55	6.002665E-11	40.90909	10
TGATACC	645	0.0	40.813953	4
CCGATGA	105	0.0	40.714287	18
GAATGAT	2200	0.0	40.397728	1
ACGGCTG	570	0.0	40.263157	8
GTTTTTT	16590	0.0	39.995476	2
CGACCAC	570	0.0	39.86842	12
AATGATA	2095	0.0	39.63007	2
TTACACG	290	0.0	39.56897	34
ATGATAC	2115	0.0	39.468086	3
TGATACG	1460	0.0	39.452057	4
CATACGA	80	0.0	39.375004	18
ACATACG	80	0.0	39.375004	17
CACCCGT	40	3.4535333E-7	39.375004	16
ATACCTG	675	0.0	39.333332	6