##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933348.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 544299 Sequences flagged as poor quality 0 Sequence length 51 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.422159511591975 31.0 28.0 33.0 25.0 34.0 2 28.60517656655625 31.0 27.0 33.0 16.0 34.0 3 28.680390741118394 31.0 27.0 34.0 16.0 34.0 4 33.0617454744543 35.0 32.0 37.0 28.0 37.0 5 34.20994526905249 35.0 33.0 37.0 30.0 37.0 6 33.55830710693938 35.0 33.0 37.0 28.0 37.0 7 33.451117859852765 35.0 32.0 37.0 28.0 37.0 8 33.41102776231446 35.0 33.0 37.0 28.0 37.0 9 34.59143963152606 37.0 34.0 39.0 28.0 39.0 10 34.25283897269699 37.0 32.0 39.0 27.0 39.0 11 34.52393078069223 37.0 33.0 39.0 27.0 39.0 12 34.56593894164788 37.0 33.0 39.0 27.0 39.0 13 34.678195256651215 37.0 33.0 39.0 27.0 39.0 14 35.43344375058562 38.0 34.0 40.0 27.0 41.0 15 35.78054708900807 38.0 34.0 40.0 27.0 41.0 16 35.751930464689444 38.0 34.0 40.0 27.0 41.0 17 35.10394654408698 37.0 33.0 40.0 27.0 41.0 18 34.958414400908325 37.0 33.0 39.0 27.0 40.0 19 34.39397463526481 37.0 32.0 38.0 27.0 40.0 20 33.81760943892971 35.0 32.0 38.0 26.0 40.0 21 34.2376983973882 35.0 33.0 38.0 27.0 40.0 22 34.895309379587324 35.0 33.0 39.0 29.0 40.0 23 35.27808245100579 36.0 34.0 39.0 30.0 40.0 24 34.81778397535178 35.0 33.0 39.0 29.0 40.0 25 33.752725983329015 35.0 33.0 39.0 24.0 40.0 26 33.906090218795185 35.0 33.0 38.0 25.0 40.0 27 34.56464186044803 35.0 33.0 39.0 27.0 40.0 28 34.36314966590054 35.0 33.0 39.0 25.0 40.0 29 34.5189941557857 35.0 33.0 39.0 25.0 40.0 30 33.756773391095706 35.0 33.0 39.0 23.0 40.0 31 33.668320169612656 35.0 33.0 39.0 23.0 40.0 32 33.25858581404706 35.0 33.0 39.0 21.0 40.0 33 32.96335102581486 36.0 32.0 39.0 16.0 40.0 34 32.52281191036544 36.0 32.0 40.0 14.0 41.0 35 32.231075199476756 36.0 31.0 40.0 10.0 41.0 36 31.356162697340984 35.0 29.0 40.0 9.0 41.0 37 31.51827212616595 35.0 30.0 40.0 8.0 41.0 38 31.252416410833018 35.0 29.0 39.0 8.0 40.0 39 30.933756997532605 35.0 28.0 39.0 8.0 40.0 40 30.845024517774238 35.0 27.0 39.0 8.0 40.0 41 30.063579025498854 35.0 24.0 39.0 8.0 40.0 42 30.529813576728966 35.0 26.0 39.0 7.0 40.0 43 30.25799973911398 35.0 24.0 39.0 7.0 40.0 44 30.556293507796266 35.0 26.0 39.0 7.0 40.0 45 30.704225067472105 35.0 27.0 39.0 7.0 40.0 46 30.57151492102686 35.0 26.0 39.0 7.0 40.0 47 30.48732589991898 35.0 26.0 39.0 7.0 40.0 48 30.366934350421367 35.0 26.0 39.0 7.0 40.0 49 30.592543804048876 35.0 27.0 39.0 7.0 40.0 50 30.377408372971473 35.0 26.0 39.0 7.0 40.0 51 29.106889779330846 34.0 23.0 38.0 7.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 25.0 9 28.0 10 34.0 11 44.0 12 40.0 13 60.0 14 93.0 15 150.0 16 259.0 17 517.0 18 975.0 19 1860.0 20 2777.0 21 4234.0 22 6043.0 23 8792.0 24 12697.0 25 17839.0 26 22562.0 27 24184.0 28 23321.0 29 22513.0 30 24560.0 31 28424.0 32 33932.0 33 40469.0 34 45312.0 35 51774.0 36 57416.0 37 59922.0 38 46589.0 39 6852.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.655940944223673 2.72846358343484 34.49684823966239 34.1187472326791 2 33.195541421167405 16.993968388698125 35.558948298637326 14.251541891497135 3 13.313638276021084 17.020240713284426 54.671788851348246 14.994332159346241 4 12.48192629418757 2.9924728871447495 67.4967251455542 17.028875673113493 5 22.75991688391858 3.5226961651592235 55.29460829433822 18.422778656583976 6 14.998190332886887 15.493138881386884 58.12485417022629 11.383816615499937 7 56.68777638761049 1.3836145206954265 38.83729347288899 3.091315618805105 8 56.23637008335493 11.260906229847933 29.093568057262644 3.409155629534502 9 52.976029718959616 2.8080154473919667 28.52457932129216 15.69137551235626 10 34.335723563703034 16.05882061146539 35.784927034589444 13.820528790242129 11 27.44631167795642 16.42020286643922 41.71953283030099 14.413952625303372 12 21.413046873134068 14.969897060255485 44.607100141650086 19.009955924960362 13 20.61220027962572 15.844416396135214 50.85146215591063 12.691921168328438 14 17.002052180878525 21.29601560906781 44.60011868476702 17.10181352528665 15 13.311249882876874 16.50728735492808 54.20550102057876 15.975961741616281 16 16.796834093026074 17.63424147389578 43.16726652079097 22.40165791228718 17 17.71893756924044 18.15142045089188 47.07853587825809 17.05110610160959 18 17.347083128941996 17.12955563026939 46.35889465165286 19.16446658913575 19 17.715263118249343 19.63369398069811 42.679666874273146 19.9713760267794 20 18.098508356620165 20.38126103483563 48.02084883492345 13.49938177362075 21 18.116145721377404 23.427380906450317 44.4869455942414 13.969527777930878 22 16.209473102100134 15.671166031905258 47.86321488740563 20.256145978588975 23 16.63074890822875 22.182476910668587 46.19703508549529 14.989739095607376 24 18.170343873496 18.87308262554221 42.475918566817136 20.480654934144653 25 16.302252989625188 25.90745160288738 40.570532005386745 17.219763402100682 26 15.554685935487663 17.031447788807256 45.80019437845743 21.613671897247652 27 18.387503927069496 19.155464184207577 42.93779705639731 19.519234832325616 28 13.566073059109057 19.931140788426948 47.27897717982212 19.223808972641876 29 19.044863209375727 18.371336342708695 44.31222544961501 18.271574998300565 30 19.967885298337862 21.66511421112293 43.52607666007103 14.840923830468181 31 19.722064527033854 17.832845549964265 43.459201652033165 18.985888270968715 32 23.343970868952542 23.929494634382937 38.30927486546916 14.417259631195353 33 22.953560451149094 18.36306882797874 37.53984482793465 21.14352589293752 34 22.826791891956443 20.07444437707951 41.11269724912226 15.986066481841782 35 23.682938972880716 22.71637463967415 35.40682602760615 18.193860359838983 36 20.79077859779276 21.26110832465244 41.27033119664008 16.67778188091472 37 21.92747001188685 25.812467044767672 36.0689620962008 16.191100847144675 38 24.01639540032225 22.01326844252883 35.29695994297252 18.6733762141764 39 23.4407926525678 24.370796198413007 34.25212980365571 17.936281345363486 40 26.377965052296627 20.82991150084788 35.03442041965904 17.75770302719645 41 21.90505586084119 22.836161741983727 36.00998715779379 19.248795239381298 42 21.27066189722928 21.749442861368475 38.70409462446192 18.275800616940323 43 21.12699086347761 20.76542488595423 36.99271907536115 21.114865175207008 44 23.67026211696145 21.264782775643535 34.19591070349202 20.869044403903004 45 18.847361468604575 21.486719615505447 34.93484279780048 24.731076118089508 46 22.911304264751543 24.60283777850042 32.83728244953601 19.64857550721203 47 17.67208831910402 21.601178763877943 41.28355922020801 19.443173696810025 48 20.69101725338463 24.97101776780777 32.5069493054369 21.8310156733707 49 20.134705373333407 21.49443596258674 37.879547822061035 20.491310842018816 50 20.203968774515477 20.851223316596208 36.33517607050536 22.60963183838295 51 20.118537788972603 21.84424369693863 33.508972090707495 24.528246423381265 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 104.0 1 767.5 2 1431.0 3 15331.0 4 29231.0 5 21340.0 6 13449.0 7 12823.5 8 12198.0 9 11917.5 10 11637.0 11 11152.0 12 10667.0 13 9918.5 14 9170.0 15 8599.5 16 8029.0 17 7413.0 18 6797.0 19 6349.0 20 5901.0 21 5667.5 22 5434.0 23 5441.5 24 5449.0 25 5421.5 26 5847.0 27 6300.0 28 6818.5 29 7337.0 30 7823.5 31 8310.0 32 9223.0 33 10136.0 34 11180.0 35 12224.0 36 12586.5 37 12949.0 38 13987.5 39 15026.0 40 15918.0 41 16810.0 42 17972.0 43 19134.0 44 21392.0 45 23650.0 46 52783.5 47 81917.0 48 58693.0 49 35469.0 50 32633.5 51 29798.0 52 26840.0 53 23882.0 54 23811.5 55 23741.0 56 23341.0 57 22941.0 58 21301.0 59 19661.0 60 17173.0 61 14685.0 62 12713.5 63 10742.0 64 9418.0 65 8094.0 66 6830.5 67 5567.0 68 4676.0 69 3785.0 70 3267.5 71 2750.0 72 2267.5 73 1785.0 74 1504.0 75 962.5 76 702.0 77 529.0 78 356.0 79 303.5 80 251.0 81 176.0 82 101.0 83 66.5 84 32.0 85 26.5 86 21.0 87 16.5 88 12.0 89 9.0 90 6.0 91 6.0 92 6.0 93 4.5 94 3.0 95 2.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 544299.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.725318070242544 #Duplication Level Percentage of deduplicated Percentage of total 1 82.58340750837654 35.284023531198436 2 5.4797570031437575 4.682487218139122 3 2.3260072265483043 2.98138195763877 4 1.53860221228645 2.6294907561406964 5 1.1865062267218656 2.5346927964507504 6 0.9932891167191562 2.546315606852173 7 0.8513808943219168 2.546286365618201 8 0.7417914213973382 2.535461953678287 9 0.6519621735637509 2.5069762111750133 >10 3.551253939089486 23.41126350443195 >50 0.059102940204355844 1.7240005124199467 >100 0.03042063098698436 2.4577915759377804 >500 0.0017383217706848208 0.5215635368141742 >1k 0.0030420630986984364 3.2755081356136877 >5k 0.0 0.0 >10k+ 0.0017383217706848208 10.362756337891023 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15289 2.8089340601397392 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCG 15039 2.7630034227510984 No Hit GAATCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTCTTC 13213 2.4275260472644633 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGC 12270 2.2542756830345083 No Hit GAACTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTCTTCT 3215 0.5906679968179255 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTGTAGGGTT 3132 0.5754190252048966 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTC 2936 0.5394094054922018 No Hit GCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTCTTCTGC 2557 0.4697785592110219 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTA 2421 0.4447922924716011 No Hit GAATGACTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTCT 2370 0.4354224424443183 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGT 1010 0.18555977505011031 No Hit GAATGCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTCTT 986 0.18115043386080076 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 634 0.11648009641759402 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTAT 608 0.11170331012917534 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATG 581 0.10674280129120209 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.07771463846158086 0.0 2 0.0 0.0 0.0 0.6518476058195954 0.0 3 0.0 0.0 0.0 0.7547322335701517 0.0 4 0.0 0.0 0.0 1.4819060847071186 0.0 5 0.0 0.0 0.0 4.467030069869685 0.0 6 0.0 0.0 0.0 4.765211767796744 0.0 7 0.0 0.0 0.0 5.352205313623578 0.0 8 0.0 0.0 0.0 6.070927927481035 0.0 9 0.0 0.0 0.0 6.211843122989387 0.0 10 0.0 0.0 0.0 9.614752185839034 0.0 11 0.0 0.0 0.0 9.84477281788135 0.0 12 0.0 0.0 0.0 12.69283978107621 0.0 13 0.0 0.0 0.0 12.93314887589358 0.0 14 0.0 0.0 0.0 13.11264580680839 0.0 15 0.0 0.0 0.0 13.71396971150048 0.0 16 0.0 0.0 0.0 14.02225614965304 0.0 17 0.0 0.0 0.0 14.172173750089565 0.0 18 0.0 0.0 0.0 14.311986610300588 0.0 19 0.0 0.0 0.0 15.154170777458713 0.0 20 0.0 0.0 0.0 15.345058506445906 0.0 21 0.0 0.0 0.0 15.49093421079223 0.0 22 0.0 0.0 0.0 15.784155399881316 0.0 23 0.0 0.0 0.0 15.932786942470958 0.0 24 0.0 0.0 0.0 16.067455571294452 0.0 25 0.0 0.0 0.0 16.173279759837882 0.0 26 0.0 0.0 0.0 16.319155464184206 0.0 27 0.0 0.0 0.0 16.50471523923432 0.0 28 0.0 0.0 0.0 16.620827890552803 0.0 29 0.0 0.0 0.0 16.756415132124072 0.0 30 0.0 0.0 0.0 16.92470498751605 0.0 31 0.0 0.0 0.0 17.06029222908732 0.0 32 0.0 0.0 0.0 17.20469815303721 0.0 33 0.0 0.0 0.0 17.34726685149155 0.0 34 0.0 0.0 0.0 17.567182743308365 0.0 35 0.0 0.0 0.0 17.782873016485425 0.0 36 0.0 0.0 0.0 17.95171403952607 0.0 37 0.0 0.0 0.0 18.137641259675288 0.0 38 0.0 0.0 0.0 18.374643348600678 0.0 39 0.0 0.0 0.0 18.828989213649116 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCTTA 20 7.0300105E-4 45.0 32 TAACACG 25 3.88809E-5 45.0 33 AACACGC 20 7.0300105E-4 45.0 34 ATGCGTT 30 2.1633878E-6 44.999996 12 CGTTTTT 11145 0.0 44.131897 1 TGATACC 1955 0.0 43.15857 4 GATACCT 1955 0.0 43.04348 5 CCGATGA 450 0.0 43.0 18 CGTTCAT 75 0.0 42.0 17 TACGGCT 1395 0.0 41.774197 7 ATACCTG 2045 0.0 41.149143 6 ACGGCTG 1415 0.0 41.024734 8 CACCGGT 110 0.0 40.909092 16 TACCTGT 2090 0.0 40.47847 7 GAATGAT 6100 0.0 40.09426 1 AATGATA 5750 0.0 39.95217 2 ATGATAC 5845 0.0 39.91873 3 CGGCTGT 1485 0.0 39.696968 9 TCGTTCA 80 0.0 39.375 16 GAATCTG 1635 0.0 38.944954 1 >>END_MODULE