##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933347.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 403469 Sequences flagged as poor quality 0 Sequence length 51 %GC 38 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.559215206124883 31.0 28.0 31.0 16.0 33.0 2 28.914104925037613 31.0 30.0 33.0 16.0 34.0 3 29.139418393978225 31.0 30.0 33.0 16.0 34.0 4 31.99006862980799 35.0 30.0 37.0 19.0 37.0 5 33.58648371993883 35.0 33.0 37.0 28.0 37.0 6 32.68030257591042 35.0 33.0 37.0 17.0 37.0 7 31.83932594573561 35.0 30.0 35.0 25.0 37.0 8 32.847475270714725 35.0 32.0 35.0 27.0 37.0 9 32.72996438388079 35.0 31.0 37.0 25.0 39.0 10 30.797379724340654 35.0 27.0 38.0 15.0 39.0 11 31.634831920172306 35.0 27.0 39.0 15.0 39.0 12 32.58650106947498 35.0 30.0 39.0 21.0 39.0 13 32.623428317912904 35.0 30.0 39.0 21.0 39.0 14 32.907799607900486 36.0 31.0 39.0 17.0 41.0 15 33.58921007561919 36.0 31.0 39.0 22.0 41.0 16 33.85512889466105 36.0 32.0 40.0 23.0 41.0 17 31.88666539436735 34.0 27.0 39.0 18.0 41.0 18 32.70711752327936 35.0 30.0 39.0 21.0 39.0 19 32.56252153201361 35.0 30.0 37.0 19.0 39.0 20 32.289586064852564 34.0 30.0 37.0 23.0 39.0 21 32.62882154514969 35.0 31.0 37.0 23.0 39.0 22 33.01700502392997 35.0 31.0 38.0 25.0 39.0 23 34.10911866834874 35.0 33.0 38.0 27.0 40.0 24 32.35074317977342 35.0 31.0 37.0 22.0 39.0 25 31.51027464315722 34.0 30.0 37.0 18.0 39.0 26 30.974501138873123 33.0 27.0 37.0 20.0 39.0 27 32.554154098580064 35.0 30.0 38.0 22.0 39.0 28 32.54625758112767 35.0 31.0 38.0 22.0 39.0 29 32.94230535679321 35.0 31.0 38.0 22.0 40.0 30 31.794943353764477 35.0 30.0 38.0 18.0 40.0 31 32.08496315702074 35.0 30.0 38.0 21.0 40.0 32 31.930358961902897 35.0 30.0 38.0 19.0 40.0 33 32.1175753279682 35.0 31.0 38.0 18.0 40.0 34 31.41417308392962 35.0 30.0 38.0 15.0 40.0 35 30.948070359804596 35.0 29.0 38.0 10.0 40.0 36 30.21616282787525 35.0 27.0 38.0 9.0 40.0 37 30.4100959429349 35.0 27.0 38.0 9.0 40.0 38 30.35120913874424 35.0 26.0 38.0 10.0 40.0 39 29.930646468501916 34.0 25.0 38.0 8.0 40.0 40 29.85471002728834 35.0 25.0 38.0 8.0 40.0 41 29.112749678413955 34.0 23.0 38.0 8.0 40.0 42 29.73845574257254 34.0 24.0 38.0 8.0 40.0 43 29.56466543898044 34.0 24.0 38.0 8.0 40.0 44 29.72544854747205 34.0 24.0 38.0 7.0 40.0 45 30.016266429391106 35.0 25.0 38.0 7.0 40.0 46 29.82118824494571 35.0 24.0 38.0 7.0 40.0 47 29.88202811120557 35.0 25.0 38.0 7.0 40.0 48 29.61933382738203 34.0 24.0 38.0 7.0 40.0 49 29.446983535290197 34.0 24.0 37.0 7.0 40.0 50 29.474494942610214 34.0 24.0 38.0 7.0 40.0 51 27.832036662048385 32.0 22.0 36.0 7.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 6.0 9 14.0 10 29.0 11 22.0 12 34.0 13 60.0 14 106.0 15 219.0 16 431.0 17 819.0 18 1350.0 19 2142.0 20 3103.0 21 4423.0 22 6153.0 23 8438.0 24 11469.0 25 15347.0 26 19459.0 27 21081.0 28 21403.0 29 22826.0 30 25926.0 31 29683.0 32 33453.0 33 37572.0 34 41646.0 35 44028.0 36 31997.0 37 16793.0 38 3385.0 39 51.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 22.99309240610803 2.7684902681494736 37.18352587187616 37.05489145386635 2 37.14188698512154 10.84940850474262 37.811083379392215 14.197621130743626 3 14.090549707660315 10.779762509635189 60.16050799441841 14.969179788286088 4 13.165571580468388 3.0155972329968352 66.50870327088326 17.310127915651513 5 18.970726375508402 3.508819760625971 59.86556587990651 17.654887983959114 6 15.307495743167381 10.448138518696604 61.56061556154252 12.683750176593492 7 56.604844486193485 1.421670562050616 38.6245287742057 3.348956177550196 8 58.27932257496858 7.312581635763839 30.716362347540947 3.691733441726626 9 54.17045671414657 2.698100721492853 31.248497406244347 11.882945158116238 10 32.05723364124629 16.287496684999343 37.92881237468058 13.726457299073783 11 24.966478217657368 16.81814464060436 44.35408916174477 13.861287979993506 12 20.855629552704173 15.425224738455743 46.91760705283429 16.80153865600579 13 19.34027149545566 16.269155746785998 51.49986739997373 12.890705357784613 14 16.469666814550806 17.979076459405803 48.10431532534098 17.44694140070241 15 13.203740559993458 16.64464927912677 54.32709824050919 15.824511920370584 16 16.449838773239083 15.928609137257139 46.67074793850333 20.950804151000447 17 17.558721983597252 16.56137150561753 48.780699384587166 17.099207126198046 18 16.779727810562896 15.639367584622363 49.08357271562375 18.497331889190992 19 17.62093246321279 18.224944171671183 45.513533877447834 18.640589487668198 20 17.492793746235773 19.245840448708577 49.29077574733127 13.970590057724387 21 18.09209629488263 20.472204803838707 46.48461220068952 14.951086700589142 22 16.328887721237567 16.07310598831633 48.946511380056464 18.651494910389648 23 16.300632762368362 20.50814312871621 47.3481233998151 15.843100709100327 24 16.705620506160322 17.82565698975634 45.68331148117947 19.785411022903865 25 15.992058869454654 21.305230389447516 44.07203527408549 18.63067546701234 26 15.331289392741448 17.47346140595684 47.47997987453807 19.715269326763643 27 16.448351670140703 18.30549558950006 46.30244207113805 18.94371066922118 28 13.835511526288267 18.667109492922627 49.25781162865053 18.23956735213858 29 17.837305964026974 17.80335044328065 46.47048472125492 17.888858871437456 30 18.446026832296905 19.768309337272505 46.14728764787381 15.638376182556776 31 18.86613345758906 18.04326974315251 45.55814697039921 17.532449828859217 32 21.39049096708793 21.622231199918705 41.97868981260022 15.008588020393141 33 20.670733067472348 18.369688873246766 41.66020189903066 19.29937616025023 34 20.366868334370174 19.68726221841083 43.46728001407791 16.47858943314108 35 20.88115815589302 22.158084016368047 38.86643087820873 18.0943269495302 36 20.373312447796486 20.436762179994002 42.39136092240049 16.79856444980903 37 20.51805714937207 24.435582411535954 39.029020816964874 16.017339622127103 38 22.083481010932687 21.97244397958703 38.6460917691322 17.29798324034808 39 21.729302623002013 22.99854511746875 37.86932825074541 17.40282400878382 40 24.383781653609073 20.451137509945003 37.859909931122345 17.305170905323582 41 20.80258954219531 21.204107378757726 39.32098872528001 18.672314353766957 42 20.1135651066129 20.91759218180331 40.68168806029707 18.287154651286716 43 19.8548091674949 20.299948694943108 39.88484865008216 19.96039348747983 44 22.002186041554616 20.82440038763821 37.52308107933943 19.650332491467744 45 18.440326270419785 21.27994963677507 37.916915549893545 22.3628085429116 46 20.691552510849657 23.428813613933166 36.569847993278294 19.309785881938886 47 17.81202521135453 21.175108868339326 41.879797456558 19.133068463748142 48 19.732866713427796 23.159895803642907 36.42857319893226 20.678664283997037 49 19.552431537491106 20.921805640582054 39.31627956546848 20.209483256458366 50 19.625547439828093 20.69973157789074 38.28621281932441 21.388508162956757 51 19.664707821418745 20.81349496491676 36.58546257581128 22.936334637853218 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 123.0 1 419.5 2 716.0 3 17573.0 4 34430.0 5 22680.0 6 10930.0 7 10390.0 8 9850.0 9 9545.0 10 9240.0 11 8765.5 12 8291.0 13 7672.5 14 7054.0 15 6446.5 16 5839.0 17 5257.5 18 4676.0 19 4286.5 20 3897.0 21 3811.5 22 3726.0 23 3693.5 24 3661.0 25 3563.5 26 3834.0 27 4202.0 28 4550.0 29 4898.0 30 5392.0 31 5886.0 32 6418.0 33 6950.0 34 7777.0 35 8604.0 36 9010.5 37 9417.0 38 10231.0 39 11045.0 40 12038.5 41 13032.0 42 13950.0 43 14868.0 44 16434.0 45 18000.0 46 29648.5 47 41297.0 48 35437.0 49 29577.0 50 27572.0 51 25567.0 52 22579.5 53 19592.0 54 18423.0 55 17254.0 56 16376.0 57 15498.0 58 14257.0 59 13016.0 60 11603.0 61 10190.0 62 9098.0 63 8006.0 64 7111.0 65 6216.0 66 5387.0 67 4558.0 68 3963.5 69 3369.0 70 2877.0 71 2385.0 72 2008.5 73 1632.0 74 1388.5 75 894.0 76 643.0 77 490.0 78 337.0 79 269.0 80 201.0 81 151.0 82 101.0 83 69.5 84 38.0 85 30.0 86 22.0 87 18.5 88 15.0 89 10.0 90 5.0 91 3.0 92 1.0 93 1.0 94 1.0 95 1.0 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 403469.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.82207329084876 #Duplication Level Percentage of deduplicated Percentage of total 1 80.22717214560339 35.157210176821714 2 6.751543957711598 5.917333082824495 3 2.958723587844183 3.8897220574161238 4 1.8872390733703406 3.3081091596235424 5 1.4205706666848794 3.1126175935147335 6 1.1040430595704682 2.9028873523649974 7 0.929756961042414 2.852071438263424 8 0.7657862574816291 2.6846673200387783 9 0.6522193680458791 2.5723444453395814 >10 3.2106932583741 21.019544032149437 >50 0.056504144366067564 1.707770842797426 >100 0.02940521798642292 2.6024618554243952 >500 0.002306291606778268 0.7852865482193223 >1k 0.002306291606778268 2.0445748868052624 >5k 0.001153145803389134 3.0592823442212214 >10k+ 5.76572901694567E-4 6.384116864175553 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 25267 6.2624389977916515 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCG 7098 1.7592429653827184 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGC 5010 1.2417310871467202 No Hit GAATCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTCTTC 3916 0.9705826222088934 No Hit GCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTCTTCTGC 1465 0.36310100652094707 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTGTAGGGTT 1429 0.35417838793067125 No Hit GAACTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTCTTCT 1282 0.31774436202037826 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTC 971 0.24066285142105093 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTA 853 0.21141649048625794 No Hit GAATGACTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTCT 657 0.16283778927253395 No Hit GAATGATACCTGTCTCTTCTACACATCTGACGCTGTAGGGTTCGTATGCCG 627 0.15540227378063742 No Hit CTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTCTTCTGCT 496 0.12293385613268924 Illumina Single End Adapter 1 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.14771890777234434 0.0 2 0.0 0.0 0.0 0.7745328637392216 0.0 3 0.0 0.0 0.0 0.9760353335696175 0.0 4 0.0 0.0 0.0 1.5797991915116154 0.0 5 0.0 0.0 0.0 2.9942820885867314 0.0 6 0.0 0.0 0.0 3.3474690744518165 0.0 7 0.0 0.0 0.0 3.7559267254733326 0.0 8 0.0 0.0 0.0 4.330692072996934 0.0 9 0.0 0.0 0.0 4.57532053268033 0.0 10 0.0 0.0 0.0 7.074892990539546 0.0 11 0.0 0.0 0.0 7.71558657542463 0.0 12 0.0 0.0 0.0 9.663195933268726 0.0 13 0.0 0.0 0.0 9.924678228067089 0.0 14 0.0 0.0 0.0 10.087268166823225 0.0 15 0.0 0.0 0.0 10.553474988165139 0.0 16 0.0 0.0 0.0 10.839246633570362 0.0 17 0.0 0.0 0.0 11.120061268647653 0.0 18 0.0 0.0 0.0 11.424669553299013 0.0 19 0.0 0.0 0.0 12.099814359963219 0.0 20 0.0 0.0 0.0 12.390543015696373 0.0 21 0.0 0.0 0.0 12.7120051354627 0.0 22 0.0 0.0 0.0 13.144999987607473 0.0 23 0.0 0.0 0.0 13.466709957890197 0.0 24 0.0 0.0 0.0 13.720756737196663 0.0 25 0.0 0.0 0.0 13.937625939043643 0.0 26 0.0 0.0 0.0 14.14259831610359 0.0 27 0.0 0.0 0.0 14.380782662360676 0.0 28 0.0 0.0 0.0 14.581045879609091 0.0 29 0.0 0.0 0.0 14.811051158825089 0.0 30 0.0 0.0 0.0 15.080712520664537 0.0 31 0.0 0.0 0.0 15.299316676126296 0.0 32 0.0 0.0 0.0 15.507015408866604 0.0 33 0.0 0.0 0.0 15.721158255033224 0.0 34 0.0 0.0 0.0 15.998255132364568 0.0 35 0.0 0.0 0.0 16.30435052011431 0.0 36 0.0 0.0 0.0 16.550466082896083 0.0 37 0.0 0.0 0.0 16.786915475538393 0.0 38 0.0 0.0 0.0 17.072934971460015 0.0 39 0.0 0.0 0.0 17.626880875606304 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACACT 20 7.027838E-4 45.0 18 TTGCACG 25 3.8862905E-5 45.0 1 TGCACGG 25 3.8862905E-5 45.0 2 CGTTTTT 9750 0.0 44.307693 1 ACCGGTG 100 0.0 42.75 17 ACGGCTG 760 0.0 42.33553 8 CCGATGA 145 0.0 41.896553 18 TACGGCT 770 0.0 41.785717 7 ATCCGGC 65 0.0 41.53846 6 CAAGACG 65 0.0 41.53846 38 GGCCGAT 125 0.0 41.399998 8 GATACCT 905 0.0 41.270714 5 TGATACC 915 0.0 40.81967 4 GCGACCA 635 0.0 40.748035 11 ATGATAC 2695 0.0 40.57514 3 TTTCGCG 100 0.0 40.5 1 GAATGAT 2900 0.0 40.422417 1 CGACCAC 630 0.0 40.357143 12 AATGATA 2710 0.0 40.1845 2 CGGCTGT 795 0.0 39.905663 9 >>END_MODULE