SRR2933346.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933346.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	313242
Sequences flagged as poor quality	0
Sequence length	51
%GC	35

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACCTGTCTCTTATACACATCTGACGCAGTCTCCTTCGTATGCCG	10517	3.3574680279145195	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	10284	3.28308464382171	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCAGTCTCCTTCGTATGC	9697	3.095689594626519	No Hit
GAATCTGTCTCTTATACACATCTGACGCAGTCTCCTTCGTATGCCGTCTTC	8471	2.7042989126617756	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAGTCTCCTT	2353	0.751176406739837	No Hit
GAACTGTCTCTTATACACATCTGACGCAGTCTCCTTCGTATGCCGTCTTCT	1911	0.6100714463577681	No Hit
GAATGACTGTCTCTTATACACATCTGACGCAGTCTCCTTCGTATGCCGTCT	1782	0.5688892294136801	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAGTCTCCTTCGTA	1763	0.5628236315692021	No Hit
GCTGTCTCTTATACACATCTGACGCAGTCTCCTTCGTATGCCGTCTTCTGC	1748	0.5580350016919825	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCAGTCTCCTTCGTATGCCGTC	1720	0.5490962259211728	No Hit
GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCAGTCTCCTTCGT	780	0.24900875361541555	No Hit
GAATGATACGGCGCTGTCTCTTATACACATCTGACGCAGTCTCCTTCGTAT	513	0.16377114180090793	No Hit
GAATGATACGGCCTGTCTCTTATACACATCTGACGCAGTCTCCTTCGTATG	452	0.14429738030021516	No Hit
GAATGCTGTCTCTTATACACATCTGACGCAGTCTCCTTCGTATGCCGTCTT	434	0.1385510244475517	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA	359	0.11460787506145408	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA	324	0.10343440534794186	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCGGGTA	35	1.2081364E-7	45.000004	5
ATGATCC	35	1.2081364E-7	45.000004	3
CGGCGAG	45	3.8198777E-10	45.0	31
CACATCG	20	7.0254196E-4	45.0	40
GCTATAC	25	3.884286E-5	45.0	33
CGCGCAT	25	3.884286E-5	45.0	36
AGGAATC	25	3.884286E-5	45.0	21
TTCAACG	20	7.0254196E-4	45.0	18
CGCTCTC	20	7.0254196E-4	45.0	19
TCCACCG	20	7.0254196E-4	45.0	24
GTGTAAC	25	3.884286E-5	45.0	10
TAGGGCA	20	7.0254196E-4	45.0	5
CTACCGG	20	7.0254196E-4	45.0	2
TGCTACG	25	3.884286E-5	45.0	4
GCGGATA	25	3.884286E-5	45.0	5
GACGAAT	25	3.884286E-5	45.0	20
CACCGCT	20	7.0254196E-4	45.0	16
AGGGCGA	20	7.0254196E-4	45.0	6
TCGAAGC	20	7.0254196E-4	45.0	23
TCAACGT	20	7.0254196E-4	45.0	19