##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933344.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 477910 Sequences flagged as poor quality 0 Sequence length 51 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.51322215479902 31.0 28.0 33.0 25.0 34.0 2 28.855114979807915 31.0 28.0 33.0 16.0 34.0 3 28.887215166035446 31.0 28.0 34.0 16.0 34.0 4 33.150752233684166 35.0 32.0 37.0 28.0 37.0 5 34.192822916448705 35.0 33.0 37.0 30.0 37.0 6 33.73801971082421 35.0 33.0 37.0 28.0 37.0 7 33.40314494360863 35.0 32.0 37.0 28.0 37.0 8 33.544470716243644 35.0 33.0 37.0 28.0 37.0 9 34.58770270553033 37.0 34.0 39.0 28.0 39.0 10 34.22814755916386 37.0 32.0 39.0 27.0 39.0 11 34.371582515536396 37.0 32.0 39.0 27.0 39.0 12 34.53289949990584 37.0 33.0 39.0 27.0 39.0 13 34.69505136950472 37.0 33.0 39.0 27.0 39.0 14 35.54754033186165 38.0 34.0 40.0 27.0 41.0 15 35.88229164487037 38.0 34.0 40.0 27.0 41.0 16 35.75963675168965 38.0 34.0 40.0 27.0 41.0 17 35.10608482768722 37.0 33.0 40.0 27.0 41.0 18 34.894787721537526 37.0 33.0 39.0 27.0 40.0 19 34.28124542277835 37.0 32.0 38.0 27.0 40.0 20 33.93666380699295 35.0 32.0 38.0 27.0 40.0 21 34.23522211295014 35.0 33.0 38.0 27.0 40.0 22 34.8400682136804 35.0 33.0 39.0 29.0 40.0 23 35.26641836329016 35.0 34.0 39.0 30.0 40.0 24 34.759680693017515 35.0 33.0 39.0 28.0 40.0 25 33.71260069887636 35.0 33.0 38.0 24.0 40.0 26 33.80224100772112 35.0 32.0 38.0 25.0 40.0 27 34.4765416082526 35.0 33.0 39.0 27.0 40.0 28 34.333776234018956 35.0 33.0 39.0 25.0 40.0 29 34.37685128999184 35.0 33.0 39.0 25.0 40.0 30 33.646747295515894 35.0 33.0 39.0 23.0 40.0 31 33.510619154234064 35.0 33.0 39.0 23.0 40.0 32 33.10594463392689 35.0 32.0 39.0 20.0 40.0 33 32.78324998430667 35.0 32.0 39.0 16.0 40.0 34 32.361015672406936 36.0 31.0 39.0 12.0 41.0 35 32.094781444204976 36.0 31.0 40.0 10.0 41.0 36 31.514301855997992 35.0 30.0 40.0 8.0 41.0 37 31.514159569793474 36.0 30.0 40.0 8.0 41.0 38 31.21636709840765 35.0 29.0 39.0 8.0 40.0 39 30.894078382959133 35.0 28.0 39.0 8.0 40.0 40 30.71282877529242 35.0 27.0 39.0 8.0 40.0 41 30.19549496767174 35.0 24.0 39.0 8.0 40.0 42 30.42875227553305 35.0 25.0 39.0 7.0 40.0 43 30.322401707434455 35.0 25.0 39.0 7.0 40.0 44 30.42750308635517 35.0 25.0 39.0 7.0 40.0 45 30.480992237032076 35.0 25.0 39.0 7.0 40.0 46 30.31558243183863 35.0 24.0 39.0 7.0 40.0 47 30.25664664895064 35.0 25.0 39.0 7.0 40.0 48 30.115279027431942 35.0 24.0 38.0 7.0 40.0 49 30.273842355255173 35.0 26.0 39.0 7.0 40.0 50 30.259103178422716 35.0 25.0 39.0 7.0 40.0 51 29.021334560900588 34.0 23.0 38.0 7.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 5.0 8 8.0 9 27.0 10 33.0 11 35.0 12 26.0 13 54.0 14 82.0 15 111.0 16 215.0 17 474.0 18 906.0 19 1535.0 20 2452.0 21 3583.0 22 5321.0 23 7710.0 24 11038.0 25 15876.0 26 20171.0 27 22095.0 28 20955.0 29 20460.0 30 21645.0 31 25051.0 32 29767.0 33 35206.0 34 39219.0 35 45184.0 36 50817.0 37 52419.0 38 39707.0 39 5723.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.415852357138377 2.6664016237366868 35.72618275407503 35.1915632650499 2 34.48117846456446 14.70402377016593 35.28321232031136 15.531585444958257 3 13.326149274968092 14.874976460002928 56.42966248875311 15.369211776275868 4 12.172794040718964 3.1116737461028228 66.85128999183947 17.864242221338746 5 20.893055177753133 3.61197715050951 56.67133979201105 18.82362787972631 6 15.43282207947103 12.805549161976105 59.52920005858844 12.232428699964428 7 58.33022954112699 1.253583310665188 37.78849574187609 2.627691406331736 8 57.57632190161327 8.88075160595091 30.42957879098575 3.1133477014500635 9 54.493314640831954 2.613881274716997 29.453453579125778 13.43935050532527 10 33.02358184595426 17.2923772258375 36.258709798916115 13.425331129292125 11 27.024753614697328 16.629281663911616 41.45403946349731 14.891925257893746 12 21.487100081605323 15.509614781025716 45.62783787742462 17.37544725994434 13 19.36682638990605 16.000502186604173 50.70347973467808 13.9291916888117 14 16.6571111715595 20.40907283798205 45.489527316858826 17.44428867359963 15 14.647109288359733 15.704839823397712 53.17088991651148 16.477160971731077 16 17.655834780607226 17.948986210792828 43.53518444895482 20.85999455964512 17 17.557489903956814 17.873030486911762 47.341340419744306 17.22813918938712 18 18.08353037182733 17.221024879161348 46.08503693163985 18.61040781737147 19 17.24425100960432 20.175765311460317 42.793203741290206 19.786779937645164 20 20.068213680400078 20.116130652214853 46.51315101169676 13.30250465568831 21 19.485049486304952 22.830030758929507 43.99510368060932 13.689816074156221 22 17.327948776966373 15.863237848130401 47.02747379213659 19.78133958276663 23 17.87135653156452 21.251072377644327 46.11809754974786 14.759473541043292 24 19.61561800338976 17.554351237680734 43.89487560419326 18.935155154736247 25 17.160134753405455 24.67724048461007 40.98303027766734 17.179594484317132 26 16.648741394823293 17.067648720470384 45.5332594003055 20.75035048440083 27 19.269736979766066 18.3917474001381 42.61450900797221 19.72400661212362 28 14.049507229394656 20.760812705321086 45.91241028645561 19.27726977882865 29 20.191249398422297 20.87464166893348 41.32723734594379 17.606871586700425 30 20.120734029419765 20.29608085204327 44.27779288987466 15.305392228662301 31 20.597183570128266 17.768826766546002 43.487267477140044 18.146722186185684 32 25.008683643363817 20.19020317633027 39.15548952731686 15.645623652989057 33 19.86482810571028 18.821744679960663 37.55728065953841 23.75614655479065 34 20.102529765018517 22.90222008327928 41.42600071143102 15.569249440271179 35 23.154150363039065 22.784206231298782 36.10993701743006 17.951706388232093 36 18.64535163524513 28.663974388483187 35.48827185034839 17.202402125923292 37 23.906802536042353 23.729363269234792 35.50961478102572 16.854219413697137 38 20.9568747253667 23.853654453767444 33.976271682952856 21.213199137912998 39 23.991337281078025 23.23240777552259 34.565503965181726 18.210750978217657 40 24.403339540917745 21.59276851289992 34.43723713669938 19.566654809482955 41 19.258437781172187 27.11933209181645 34.02063149965475 19.601598627356616 42 21.56472976083363 22.93925634533699 36.62279508694105 18.873218806888325 43 21.664748592831288 23.87457889560796 32.36236948379402 22.098303027766732 44 22.808060094996964 21.926094871419306 33.096817392396055 22.16902764118767 45 20.22179908350945 21.128036659622104 33.87185871816869 24.778305538699755 46 23.61365110585675 24.183005168337136 31.677094013517188 20.526249712288923 47 17.376493482036366 22.682513443953884 39.634450001046226 20.306543072963528 48 19.85583059571886 23.890899960243562 33.78816095080664 22.465108493230943 49 20.145424870791572 21.535644786675316 37.46563160427696 20.853298738256157 50 19.409093762423886 21.71454876441171 35.719486932686074 23.156870540478334 51 19.395702119645957 21.338536544537675 33.83503170052939 25.43072963528698 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 59.0 1 724.5 2 1390.0 3 14856.5 4 28323.0 5 20654.0 6 12985.0 7 11911.5 8 10838.0 9 10505.5 10 10173.0 11 9746.5 12 9320.0 13 8848.0 14 8376.0 15 7865.0 16 7354.0 17 6816.5 18 6279.0 19 5844.5 20 5410.0 21 5062.0 22 4714.0 23 4614.5 24 4515.0 25 4579.0 26 4961.5 27 5280.0 28 5801.0 29 6322.0 30 6743.0 31 7164.0 32 7828.0 33 8492.0 34 9407.5 35 10323.0 36 10776.0 37 11229.0 38 11811.5 39 12394.0 40 13007.0 41 13620.0 42 14248.0 43 14876.0 44 16449.5 45 18023.0 46 40511.5 47 63000.0 48 45081.5 49 27163.0 50 25961.0 51 24759.0 52 23037.0 53 21315.0 54 21407.5 55 21500.0 56 21242.5 57 20985.0 58 20340.0 59 19695.0 60 18118.5 61 16542.0 62 14526.0 63 12510.0 64 10894.5 65 9279.0 66 7847.5 67 6416.0 68 5307.5 69 4199.0 70 3591.5 71 2984.0 72 2510.5 73 2037.0 74 1742.5 75 1229.0 76 1010.0 77 770.0 78 530.0 79 371.5 80 213.0 81 167.0 82 121.0 83 91.0 84 61.0 85 42.0 86 23.0 87 16.5 88 10.0 89 7.5 90 5.0 91 3.0 92 1.0 93 1.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 477910.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.636484244054316 #Duplication Level Percentage of deduplicated Percentage of total 1 78.91468915564104 39.95962414054062 2 7.886372935134202 7.986763977453188 3 4.432374321422623 6.733195574714027 4 2.8517274116469924 5.776058005928028 5 1.9486871163938964 4.933733223293557 6 1.276053816958916 3.8768927398203306 7 0.8272362000836266 2.932183296815214 8 0.5238206799216327 2.1219550084449255 9 0.33791969843537645 1.539995893702067 >10 0.9142955220318206 7.248050298097941 >50 0.053012207098153755 1.859600554570421 >100 0.02880190778996535 2.7063338825315473 >500 4.1741895347775874E-4 0.13527442087005548 >1k 0.002921932674344311 2.7621345811404456 >5k 4.1741895347775874E-4 1.7184078776149236 >10k+ 0.0012522568604332763 7.709796524462726 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13238 2.7699776108472305 No Hit GAATCTGTCTCTTATACACATCTGACGCAGTGCTGATCGTATGCCGTCTTC 12378 2.590027411018811 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGTGCTGATCGTATGCCG 10860 2.27239438387981 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAGTGCTGATCGTATGC 8130 1.7011571216337804 No Hit GAACTGTCTCTTATACACATCTGACGCAGTGCTGATCGTATGCCGTCTTCT 2704 0.565796907367496 No Hit GCTGTCTCTTATACACATCTGACGCAGTGCTGATCGTATGCCGTCTTCTGC 2112 0.4419242116716537 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAGTGCTGATCGTATGCCGTC 2059 0.4308342574961813 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAGTGCTGAT 1845 0.38605595195748155 No Hit GAATGACTGTCTCTTATACACATCTGACGCAGTGCTGATCGTATGCCGTCT 1825 0.3818710635893788 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAGTGCTGATCGTA 1389 0.29064049716473817 No Hit GAATGCTGTCTCTTATACACATCTGACGCAGTGCTGATCGTATGCCGTCTT 1134 0.23728317047142766 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCAGTGCTGATCGT 640 0.133916427779289 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04184888368102781 0.0 2 0.0 0.0 0.0 0.5557531752840493 0.0 3 0.0 0.0 0.0 0.6543072963528698 0.0 4 0.0 0.0 0.0 1.3475340545290955 0.0 5 0.0 0.0 0.0 4.4307505597288195 0.0 6 0.0 0.0 0.0 4.800276202632295 0.0 7 0.0 0.0 0.0 5.338662091188717 0.0 8 0.0 0.0 0.0 5.9417045050323285 0.0 9 0.0 0.0 0.0 6.07980582117972 0.0 10 0.0 0.0 0.0 8.866313741080956 0.0 11 0.0 0.0 0.0 9.063421983218598 0.0 12 0.0 0.0 0.0 11.21047896047373 0.0 13 0.0 0.0 0.0 11.39126613797577 0.0 14 0.0 0.0 0.0 11.53585403109372 0.0 15 4.184888368102781E-4 0.0 0.0 11.949948735117491 0.0 16 4.184888368102781E-4 0.0 0.0 12.172375551882153 0.0 17 4.184888368102781E-4 0.0 0.0 12.293737314557134 0.0 18 4.184888368102781E-4 0.0 0.0 12.386014103073801 0.0 19 4.184888368102781E-4 0.0 0.0 12.955577409972589 0.0 20 4.184888368102781E-4 0.0 0.0 13.094934192630411 0.0 21 4.184888368102781E-4 0.0 0.0 13.191186625096776 0.0 22 4.184888368102781E-4 0.0 0.0 13.391433533510494 0.0 23 4.184888368102781E-4 0.0 0.0 13.499612897825951 0.0 24 4.184888368102781E-4 0.0 0.0 13.603188884936495 0.0 25 4.184888368102781E-4 0.0 0.0 13.691908518340274 0.0 26 4.184888368102781E-4 0.0 0.0 13.807202192881505 0.0 27 4.184888368102781E-4 0.0 0.0 13.966855684124626 0.0 28 4.184888368102781E-4 0.0 0.0 14.05536607311 0.0 29 4.184888368102781E-4 0.0 0.0 14.171915214161663 0.0 30 6.277332552154172E-4 0.0 0.0 14.302274486828065 0.0 31 6.277332552154172E-4 0.0 0.0 14.408152162541064 0.0 32 6.277332552154172E-4 0.0 0.0 14.529932414052855 0.0 33 6.277332552154172E-4 0.0 0.0 14.65192190998305 0.0 34 6.277332552154172E-4 0.0 0.0 14.81513255633906 0.0 35 6.277332552154172E-4 0.0 0.0 14.966625515264381 0.0 36 6.277332552154172E-4 0.0 0.0 15.105773053503798 0.0 37 6.277332552154172E-4 0.0 0.0 15.254964323826663 0.0 38 6.277332552154172E-4 0.0 0.0 15.436588479002323 0.0 39 6.277332552154172E-4 0.0 0.0 15.737063463832103 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GAACCTA 20 7.0291443E-4 45.000004 23 GCGATTA 25 3.887373E-5 45.0 9 ATACCGC 25 3.887373E-5 45.0 28 CGTTTTT 9820 0.0 44.106415 1 TACGGCT 960 0.0 42.89062 7 ACGGCTG 970 0.0 42.680412 8 TGATACC 1370 0.0 42.043793 4 GATACCT 1360 0.0 42.022057 5 ACCGGTG 70 0.0 41.785717 17 GAATCTG 1610 0.0 41.226707 1 ATACCTG 1395 0.0 40.96774 6 CGATGAA 310 0.0 40.64516 19 CGGCTGT 1055 0.0 40.308056 9 ATGATAC 3925 0.0 40.24204 3 GAATGAT 4095 0.0 40.054943 1 AATCTGT 1635 0.0 40.04587 2 CACGACC 180 0.0 40.000004 27 CCGATGA 315 0.0 40.0 18 AATGATA 3915 0.0 39.88506 2 CGACCAA 170 0.0 39.705883 29 >>END_MODULE