SRR2933341.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933341.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	380859
Sequences flagged as poor quality	0
Sequence length	51
%GC	31

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	26671	7.002854074605038	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCG	5091	1.3367151623041598	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGC	4202	1.1032954452960282	No Hit
GAATCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTCTTC	3946	1.0360789688572412	No Hit
GAACTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTCTTCT	1155	0.3032618370578088	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGCAAAGAGT	1034	0.27149154936603836	No Hit
GCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTCTTCTGC	979	0.25705050950614267	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTC	736	0.1932473697615128	No Hit
GAATGCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTCTT	498	0.13075705182232794	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA	497	0.13049448746123893	No Hit
GAATGACTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTCT	476	0.12498063587836968	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTA	432	0.11342780399045316	No Hit
GAATGATACCTGTCTCTTCTACACATCTGACGCGCAAAGAGTCGTATGCCG	426	0.11185241782391908	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC	422	0.11080216037956303	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCC	409	0.10738882368540588	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTT	383	0.10056215029709158	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGGGTAT	25	3.8858772E-5	45.0	6
CGCGGGT	20	7.02734E-4	45.0	4
ACCGCAG	45	3.8380676E-10	45.0	35
GATCCGT	20	7.02734E-4	45.0	5
GATCCGG	40	6.7939254E-9	45.0	5
ATCCGTC	20	7.02734E-4	45.0	6
ATCCGGC	35	1.209064E-7	45.0	6
CCCGTTG	20	7.02734E-4	45.0	1
GGTATGC	40	6.7939254E-9	45.0	8
TCGTAGG	20	7.02734E-4	45.0	2
ACCCGTC	35	1.209064E-7	45.0	17
GGACCTA	25	3.8858772E-5	45.0	8
TATACGG	20	7.02734E-4	45.0	27
CCGCCTC	20	7.02734E-4	45.0	15
TGATCCG	60	0.0	44.999996	4
CCCCGCT	30	2.1616652E-6	44.999996	16
CGTTTTT	15750	0.0	44.42857	1
CGATGAA	115	0.0	43.043476	19
CGACCAC	440	0.0	42.954548	12
ACCACCG	260	0.0	42.403843	14