##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933341.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 380859 Sequences flagged as poor quality 0 Sequence length 51 %GC 31 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.91888336628516 31.0 28.0 31.0 16.0 33.0 2 29.249470276401503 31.0 30.0 33.0 16.0 34.0 3 29.337114260133013 31.0 30.0 33.0 16.0 34.0 4 32.621915196962654 35.0 32.0 37.0 19.0 37.0 5 33.94407116544443 35.0 33.0 37.0 30.0 37.0 6 33.26926762922761 35.0 33.0 37.0 26.0 37.0 7 32.79583782974802 35.0 32.0 37.0 26.0 37.0 8 33.42498930050228 35.0 33.0 37.0 28.0 37.0 9 33.604835385273816 35.0 32.0 39.0 26.0 39.0 10 32.74729755631349 37.0 30.0 39.0 17.0 39.0 11 33.71475532940012 37.0 31.0 39.0 23.0 39.0 12 34.23161852549106 37.0 32.0 39.0 27.0 39.0 13 34.47825048114919 37.0 32.0 39.0 27.0 39.0 14 34.51960436802071 37.0 32.0 40.0 24.0 41.0 15 35.13470601981311 38.0 32.0 40.0 27.0 41.0 16 35.282104400841256 38.0 32.0 40.0 27.0 41.0 17 33.40603215363166 36.0 30.0 40.0 19.0 41.0 18 33.86664093535928 37.0 32.0 39.0 25.0 39.0 19 33.54169653336274 37.0 32.0 37.0 25.0 39.0 20 32.83244980425827 35.0 32.0 36.0 25.0 39.0 21 32.96075713059164 35.0 32.0 37.0 25.0 39.0 22 32.828432569533604 34.0 30.0 37.0 25.0 39.0 23 33.89847423849771 35.0 33.0 38.0 27.0 40.0 24 32.03757558571545 35.0 31.0 36.0 21.0 39.0 25 31.069949771437724 34.0 27.0 36.0 18.0 39.0 26 29.97070831987691 33.0 25.0 36.0 18.0 39.0 27 32.18690118915399 34.0 30.0 37.0 22.0 39.0 28 32.3170989788872 35.0 31.0 37.0 21.0 39.0 29 32.196999414481475 35.0 30.0 38.0 21.0 40.0 30 31.16658133324931 34.0 27.0 37.0 18.0 40.0 31 31.62326215213504 35.0 30.0 37.0 20.0 39.0 32 31.21774987593834 35.0 30.0 37.0 16.0 39.0 33 30.575160361183535 35.0 27.0 38.0 12.0 40.0 34 28.999585148309478 34.0 21.0 37.0 8.0 40.0 35 28.183876447714248 34.0 18.0 37.0 7.0 40.0 36 27.359264189634484 33.0 15.0 37.0 7.0 40.0 37 27.1832384163168 33.0 15.0 37.0 7.0 40.0 38 27.199036913923525 33.0 15.0 38.0 7.0 40.0 39 26.81486849463975 33.0 15.0 37.0 7.0 40.0 40 26.764868363357568 33.0 15.0 37.0 7.0 40.0 41 26.47299394264019 33.0 15.0 37.0 7.0 40.0 42 26.547499205742806 33.0 14.0 37.0 7.0 40.0 43 26.63795000249436 33.0 13.0 37.0 7.0 40.0 44 26.47886488175414 33.0 12.0 37.0 7.0 40.0 45 26.641649534342104 33.0 10.0 38.0 7.0 40.0 46 26.354167815385747 33.0 10.0 38.0 7.0 40.0 47 26.322783497304776 33.0 10.0 38.0 7.0 40.0 48 26.059848920466628 32.0 10.0 37.0 7.0 40.0 49 25.776182261676894 32.0 10.0 37.0 7.0 39.0 50 25.94794136412688 32.0 10.0 37.0 7.0 40.0 51 24.70355170811245 30.0 10.0 35.0 7.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 3.0 10 13.0 11 15.0 12 15.0 13 43.0 14 83.0 15 175.0 16 438.0 17 768.0 18 1507.0 19 2407.0 20 3990.0 21 5913.0 22 8306.0 23 11811.0 24 16112.0 25 21773.0 26 26351.0 27 25676.0 28 22018.0 29 20185.0 30 20784.0 31 23035.0 32 26186.0 33 29789.0 34 33440.0 35 35987.0 36 26529.0 37 14371.0 38 3076.0 39 58.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 18.552272625827406 2.0695322941035923 31.17610454262601 48.20209053744299 2 50.025074896484 9.390876938709601 29.08582966399639 11.49821850081001 3 9.690725439073253 9.398753869542272 68.82153237812419 12.088988313260288 4 8.593468974082272 2.269081208531241 75.32420134485466 13.81324847253183 5 14.494602989557814 2.706775998466624 69.36294009068973 13.435680921285831 6 11.138505326118064 8.127154668788187 70.84327795850957 9.89106204658417 7 45.25112968316359 0.724677636605673 51.80237305669553 2.221819623535219 8 46.65033516340693 5.640145040553065 45.135863928645506 2.5736558673944954 9 43.325745223297865 2.084235898324577 44.948392974827954 9.641625903549608 10 22.432448754000823 16.774974465615884 50.51370717247066 10.27886960791264 11 15.227682685718335 15.333233558876119 58.19712807101841 11.241955684387134 12 12.555302618554373 13.809310007115494 59.48316831163238 14.152219062697743 13 12.604402154078018 14.413995730703489 62.95952045245091 10.022081662767587 14 12.222371008693505 16.26586216946429 58.122297228108046 13.389469593734162 15 10.003964721852444 15.18462213049974 62.743692547635746 12.067720600012077 16 10.841282469365304 15.46845420483696 57.425713978138894 16.264549347658843 17 11.305233695409587 16.006973709430525 60.03376577683605 12.65402681832384 18 11.479313866811601 15.03075941490158 58.99532372872901 14.494602989557814 19 11.515547748641886 17.580259361075885 56.58288237904316 14.32131051123907 20 13.011114349404899 16.549169115079334 59.93267849781678 10.507038037698992 21 13.278404868993512 18.866299601689864 56.73648253028023 11.118812999036388 22 12.174059166253128 14.65240417057231 58.54345046329481 14.630086199879747 23 11.93696354818975 18.90489656276995 57.266599975318954 11.89153991372135 24 12.235236662386868 16.046620927954965 57.585090545319915 14.133051864338245 25 11.011161610989893 20.08722388075377 55.63975119401143 13.261863314244904 26 11.88628862649957 16.78573960442053 57.6764629429789 13.651508826100997 27 12.317419307407729 17.320058079236674 56.000514626147734 14.362007987207864 28 11.167912534560035 17.216607720967602 58.470720135273154 13.144759609199205 29 14.362007987207864 15.233984230384474 55.81540675157998 14.58860103082768 30 11.874998358972743 18.40497401925647 56.243649224516155 13.476378397254626 31 13.330917741211316 18.605835755489565 53.7143667341457 14.348879769153413 32 13.522064596084116 21.56231046135184 52.315948946985635 12.599675995578416 33 12.73200843356728 20.57323051312953 49.81371058580735 16.881050467495847 34 17.417994585922873 21.803344544831553 46.87377743469368 13.904883434551895 35 13.423340396314645 23.877865561795836 44.25574819027514 18.443045851614375 36 17.79372418664125 23.813799857690114 42.30778319535576 16.084692760312873 37 15.18435956613865 25.2980761909263 43.07945985259637 16.43810439033868 38 16.186305168054318 26.756358652414676 42.329838601687236 14.727497577843767 39 19.216823023743697 24.539265187379055 41.32395453435523 14.919957254522014 40 17.12129685789229 26.172152948991624 42.19855642114273 14.507993771973354 41 20.321956419567346 23.962148721705407 40.925381834222115 14.790513024505131 42 16.532102431608546 25.27602078459482 42.721847192793135 15.470029591003495 43 19.69127682423154 22.889310742295706 40.82219404031413 16.597218393158624 44 18.09383525136599 23.654948419231264 39.94050291577723 18.310713413625514 45 16.104910216116725 24.01466159392321 40.05996970007273 19.820458489887333 46 18.78569234283554 24.923134283291194 38.222281736810736 18.068891637062535 47 15.664589782570454 23.548347288629127 42.75493030229035 18.032132626510073 48 17.794774444085608 23.816162936939918 38.24249919261459 20.146563426359887 49 15.73206882337033 23.416277415001353 40.85527714981135 19.99637661181697 50 17.429547417810788 21.874236922325586 40.582735343000955 20.11348031686267 51 17.075873223423894 21.89944310099013 39.10712363368071 21.917560041905272 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 47.0 1 258.5 2 470.0 3 19635.5 4 38801.0 5 27133.5 6 15466.0 7 14963.5 8 14461.0 9 14399.5 10 14338.0 11 13947.5 12 13557.0 13 12877.5 14 12198.0 15 11368.5 16 10539.0 17 9939.5 18 9340.0 19 8678.5 20 8017.0 21 7428.5 22 6840.0 23 6393.5 24 5947.0 25 5813.5 26 5616.0 27 5552.0 28 5744.0 29 5936.0 30 6433.0 31 6930.0 32 7285.5 33 7641.0 34 8416.5 35 9192.0 36 9874.5 37 10557.0 38 11145.0 39 11733.0 40 12101.0 41 12469.0 42 13173.5 43 13878.0 44 14633.5 45 15389.0 46 24756.5 47 34124.0 48 28724.5 49 23325.0 50 21354.5 51 19384.0 52 16744.5 53 14105.0 54 12507.0 55 10909.0 56 9392.0 57 7875.0 58 6740.5 59 5606.0 60 4736.5 61 3867.0 62 3309.5 63 2752.0 64 2157.5 65 1563.0 66 1216.5 67 870.0 68 675.0 69 480.0 70 373.0 71 266.0 72 220.0 73 174.0 74 183.5 75 223.5 76 254.0 77 166.0 78 78.0 79 56.0 80 34.0 81 22.0 82 10.0 83 8.0 84 6.0 85 4.5 86 3.0 87 2.0 88 1.0 89 0.5 90 0.0 91 0.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 380859.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.50474742272878 #Duplication Level Percentage of deduplicated Percentage of total 1 84.74038161942677 51.27195386389065 2 8.282298640859596 10.022367746896395 3 3.0919224695272023 5.612279642082096 4 1.4914417919182057 3.609572356628522 5 0.787104012389053 2.381176473250802 6 0.4799342615319995 1.7422980764104492 7 0.2776035048954932 1.1757430963156246 8 0.17537790440969706 0.8488956647868954 9 0.12105459562015196 0.6591939959122077 >10 0.47506168056196924 5.139270684701066 >50 0.04044856347516811 1.7163232513911768 >100 0.0338536889954956 4.165781481210541 >500 8.793165972856E-4 0.4562142554454711 >1k 0.0017586331945712 2.7497881973993206 >5k 4.396582986428E-4 1.3542780026081012 >10k+ 4.396582986428E-4 7.094863211070647 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 26671 7.002854074605038 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCG 5091 1.3367151623041598 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGC 4202 1.1032954452960282 No Hit GAATCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTCTTC 3946 1.0360789688572412 No Hit GAACTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTCTTCT 1155 0.3032618370578088 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGCAAAGAGT 1034 0.27149154936603836 No Hit GCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTCTTCTGC 979 0.25705050950614267 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTC 736 0.1932473697615128 No Hit GAATGCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTCTT 498 0.13075705182232794 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 497 0.13049448746123893 No Hit GAATGACTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTCT 476 0.12498063587836968 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTA 432 0.11342780399045316 No Hit GAATGATACCTGTCTCTTCTACACATCTGACGCGCAAAGAGTCGTATGCCG 426 0.11185241782391908 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC 422 0.11080216037956303 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCC 409 0.10738882368540588 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTT 383 0.10056215029709158 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.6256436108901195E-4 0.0 0.0 0.07955700140997062 0.0 2 2.6256436108901195E-4 0.0 0.0 0.4655266122108182 0.0 3 2.6256436108901195E-4 0.0 0.0 0.5952334065887901 0.0 4 2.6256436108901195E-4 0.0 0.0 1.1689365355682813 0.0 5 2.6256436108901195E-4 0.0 0.0 2.6049010263640877 0.0 6 2.6256436108901195E-4 0.0 0.0 3.128454362375577 0.0 7 2.6256436108901195E-4 0.0 0.0 3.60868457880738 0.0 8 2.6256436108901195E-4 0.0 0.0 4.171360004621133 0.0 9 2.6256436108901195E-4 0.0 0.0 4.461493623624491 0.0 10 2.6256436108901195E-4 0.0 0.0 6.490328441759286 0.0 11 2.6256436108901195E-4 0.0 0.0 6.9453524795265436 0.0 12 2.6256436108901195E-4 0.0 0.0 8.594781795887718 0.0 13 2.6256436108901195E-4 0.0 0.0 8.810872265063974 0.0 14 2.6256436108901195E-4 0.0 0.0 8.952394455690952 0.0 15 2.6256436108901195E-4 0.0 0.0 9.216796767307587 0.0 16 5.251287221780239E-4 0.0 0.0 9.409519008346921 0.0 17 5.251287221780239E-4 0.0 0.0 9.592788932387052 0.0 18 5.251287221780239E-4 0.0 0.0 9.785773737787475 0.0 19 5.251287221780239E-4 0.0 0.0 10.28175781588462 0.0 20 5.251287221780239E-4 0.0 0.0 10.443234897954362 0.0 21 5.251287221780239E-4 0.0 0.0 10.635694574632607 0.0 22 5.251287221780239E-4 0.0 0.0 10.885655846389346 0.0 23 5.251287221780239E-4 0.0 0.0 11.100958622482336 0.0 24 5.251287221780239E-4 0.0 0.0 11.267949556134948 0.0 25 5.251287221780239E-4 0.0 0.0 11.402119944651433 0.0 26 5.251287221780239E-4 0.0 0.0 11.541804184750786 0.0 27 5.251287221780239E-4 0.0 0.0 11.695929464710037 0.0 28 5.251287221780239E-4 0.0 0.0 11.834038318642857 0.0 29 5.251287221780239E-4 0.0 0.0 11.978973845963992 0.0 30 5.251287221780239E-4 0.0 0.0 12.156204789699075 0.0 31 5.251287221780239E-4 0.0 0.0 12.323720852073865 0.0 32 5.251287221780239E-4 0.0 0.0 12.491236914448654 0.0 33 5.251287221780239E-4 0.0 0.0 12.661903749156512 0.0 34 5.251287221780239E-4 0.0 0.0 12.84044751469704 0.0 35 5.251287221780239E-4 0.0 0.0 13.023454874376082 0.0 36 5.251287221780239E-4 0.0 0.0 13.198060174500274 0.0 37 5.251287221780239E-4 0.0 0.0 13.378179326207336 0.0 38 5.251287221780239E-4 0.0 0.0 13.559348735358755 0.0 39 5.251287221780239E-4 0.0 0.0 13.771500739118677 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGTAT 25 3.8858772E-5 45.0 6 CGCGGGT 20 7.02734E-4 45.0 4 ACCGCAG 45 3.8380676E-10 45.0 35 GATCCGT 20 7.02734E-4 45.0 5 GATCCGG 40 6.7939254E-9 45.0 5 ATCCGTC 20 7.02734E-4 45.0 6 ATCCGGC 35 1.209064E-7 45.0 6 CCCGTTG 20 7.02734E-4 45.0 1 GGTATGC 40 6.7939254E-9 45.0 8 TCGTAGG 20 7.02734E-4 45.0 2 ACCCGTC 35 1.209064E-7 45.0 17 GGACCTA 25 3.8858772E-5 45.0 8 TATACGG 20 7.02734E-4 45.0 27 CCGCCTC 20 7.02734E-4 45.0 15 TGATCCG 60 0.0 44.999996 4 CCCCGCT 30 2.1616652E-6 44.999996 16 CGTTTTT 15750 0.0 44.42857 1 CGATGAA 115 0.0 43.043476 19 CGACCAC 440 0.0 42.954548 12 ACCACCG 260 0.0 42.403843 14 >>END_MODULE