##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933340.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 843000 Sequences flagged as poor quality 0 Sequence length 51 %GC 37 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.569370106761564 31.0 28.0 33.0 25.0 34.0 2 28.918517200474497 31.0 28.0 33.0 16.0 34.0 3 28.9415931198102 31.0 28.0 34.0 16.0 34.0 4 33.25896559905101 35.0 32.0 37.0 28.0 37.0 5 34.298086595492286 35.0 33.0 37.0 30.0 37.0 6 33.83962040332147 35.0 33.0 37.0 28.0 37.0 7 33.60300711743772 35.0 32.0 37.0 29.0 37.0 8 33.690479240806646 35.0 33.0 37.0 28.0 37.0 9 34.74277580071174 37.0 34.0 39.0 28.0 39.0 10 34.65198220640569 37.0 33.0 39.0 27.0 39.0 11 34.922162514827995 37.0 34.0 39.0 27.0 39.0 12 35.068979833926456 37.0 34.0 39.0 27.0 39.0 13 35.29776037959668 37.0 34.0 39.0 30.0 39.0 14 35.97872597864769 38.0 34.0 40.0 27.0 41.0 15 36.35887425860024 38.0 34.0 40.0 30.0 41.0 16 36.29094661921708 38.0 34.0 40.0 30.0 41.0 17 35.57695729537367 38.0 33.0 40.0 27.0 41.0 18 35.321161328588374 37.0 33.0 39.0 27.0 40.0 19 34.623894424673786 37.0 33.0 38.0 27.0 40.0 20 34.20189916963226 35.0 33.0 38.0 27.0 40.0 21 34.43981257413998 35.0 33.0 38.0 27.0 40.0 22 35.023462633451956 35.0 33.0 39.0 30.0 40.0 23 35.38070106761566 36.0 34.0 39.0 30.0 40.0 24 34.81508185053381 35.0 33.0 39.0 28.0 40.0 25 33.700625148279954 35.0 33.0 38.0 24.0 40.0 26 33.82915065243179 35.0 33.0 38.0 25.0 40.0 27 34.614640569395014 35.0 33.0 39.0 27.0 40.0 28 34.37177461447212 35.0 33.0 39.0 25.0 40.0 29 34.495725978647684 35.0 33.0 39.0 25.0 40.0 30 33.68793712930012 35.0 33.0 39.0 22.0 40.0 31 33.70840925266904 35.0 33.0 39.0 23.0 40.0 32 33.094365361803085 35.0 33.0 39.0 18.0 40.0 33 32.51082799525504 35.0 31.0 39.0 15.0 40.0 34 31.9847034400949 36.0 31.0 40.0 10.0 41.0 35 31.527360616844604 36.0 30.0 40.0 8.0 41.0 36 31.051835112692764 36.0 27.0 40.0 8.0 41.0 37 30.940837485172004 36.0 26.0 40.0 7.0 41.0 38 30.64782206405694 35.0 25.0 40.0 8.0 41.0 39 30.237876631079477 35.0 23.0 39.0 7.0 40.0 40 29.935285883748517 35.0 23.0 39.0 7.0 40.0 41 29.6819478054567 35.0 22.0 39.0 7.0 40.0 42 29.773848161328587 35.0 22.0 39.0 7.0 40.0 43 29.672166073546858 35.0 22.0 39.0 7.0 40.0 44 29.773328588374852 35.0 22.0 39.0 7.0 40.0 45 29.869469750889678 35.0 23.0 39.0 7.0 40.0 46 29.600724792408066 35.0 22.0 39.0 7.0 40.0 47 29.477198102016608 35.0 22.0 39.0 7.0 40.0 48 29.364727164887306 35.0 22.0 39.0 7.0 40.0 49 29.53272953736655 35.0 22.0 39.0 7.0 40.0 50 29.538188612099646 35.0 22.0 39.0 7.0 40.0 51 28.254542111506524 34.0 20.0 38.0 7.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 13.0 9 30.0 10 25.0 11 51.0 12 54.0 13 93.0 14 132.0 15 207.0 16 380.0 17 737.0 18 1533.0 19 2776.0 20 4453.0 21 6870.0 22 9883.0 23 14438.0 24 21142.0 25 30800.0 26 40120.0 27 42728.0 28 39874.0 29 37246.0 30 37345.0 31 40297.0 32 46127.0 33 54956.0 34 64046.0 35 75977.0 36 86737.0 37 94025.0 38 77799.0 39 12105.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.203795966785293 2.5812574139976276 34.355397390272834 37.859549228944246 2 36.822419928825624 14.056227758007116 35.1361803084223 13.985172004744959 3 12.71043890865955 14.240688018979833 58.744365361803084 14.304507710557532 4 11.099525504151838 2.8123368920521945 69.32882562277581 16.75931198102017 5 19.513879003558717 3.412811387900356 60.02609727164887 17.047212336892052 6 14.069039145907473 12.246856465005932 62.179240806642945 11.504863582443653 7 56.0926453143535 1.0207591933570581 40.51874258600237 2.36785290628707 8 55.6858837485172 8.56120996441281 33.00118623962041 2.751720047449585 9 52.73831553973902 2.8220640569395017 32.099051008303675 12.340569395017793 10 29.526215895610914 22.268446026097273 37.50296559905101 10.702372479240807 11 21.667141162514827 17.31838671411625 47.37342823250297 13.641043890865955 12 16.952431791221827 16.64733096085409 49.19988137603796 17.20035587188612 13 16.62835112692764 16.909489916963228 53.89845788849348 12.563701067615659 14 15.045077105575327 21.746737841043892 47.235112692763934 15.973072360616843 15 12.627164887307234 16.799051008303678 54.870937129300124 15.702846975088969 16 14.980427046263344 19.192052194543297 46.63214709371293 19.195373665480428 17 15.37876631079478 18.702016607354686 50.379359430604985 15.539857651245551 18 15.946500593119811 17.26334519572954 48.948635824436536 17.841518386714117 19 15.23962040332147 19.04258600237248 46.74246737841044 18.97532621589561 20 17.66405693950178 19.345195729537366 50.42218268090154 12.568564650059312 21 17.14650059311981 22.584223013048636 47.42325029655991 12.846026097271649 22 16.158956109134046 15.4570581257414 49.81126927639383 18.572716488730723 23 15.527639383155398 21.909134045077106 48.75421115065243 13.809015421115065 24 16.75634638196916 18.173309608540926 47.5785290628707 17.491814946619215 25 14.267852906287072 25.373428232502963 45.12882562277581 15.229893238434164 26 15.38612099644128 17.511862396204034 48.79857651245552 18.30344009489917 27 17.213997627520758 19.15409252669039 45.704982206405695 17.926927639383155 28 12.557532621589562 20.06773428232503 49.970581257414 17.40415183867141 29 16.769276393831554 17.45314353499407 48.56465005931198 17.212930011862397 30 14.741162514827996 20.09632265717675 47.866310794780546 17.29620403321471 31 18.695610913404508 17.619691577698696 43.8141162514828 19.870581257413996 32 20.397627520759194 21.72550415183867 43.119810201660734 14.757058125741398 33 16.626097271648874 22.218861209964412 39.90782918149466 21.24721233689205 34 20.6938315539739 21.83831553973903 42.445432977461444 15.022419928825622 35 16.203084223013047 26.22787663107948 38.0570581257414 19.511981020166075 36 17.050889679715304 26.315539739027283 37.52775800711744 19.10581257413998 37 19.901897983392644 23.602372479240806 37.15836298932385 19.337366548042706 38 18.40011862396204 27.166073546856467 34.309371293001185 20.12443653618031 39 24.593950177935945 23.27425860023725 34.801660735468566 17.330130486358243 40 19.722419928825623 27.45290628706999 36.18659549228944 16.63807829181495 41 20.179952550415184 27.851957295373666 33.491340450771055 18.476749703440095 42 19.493950177935943 25.923013048635823 37.28161328588374 17.301423487544483 43 20.813048635824437 25.202372479240807 34.14033214709371 19.844246737841043 44 21.395136417556344 23.5202846975089 34.0202846975089 21.064294187425862 45 18.851008303677343 22.759786476868328 34.754092526690386 23.635112692763936 46 22.716251482799528 25.050533807829183 33.207591933570576 19.025622775800713 47 16.487069988137605 24.440688018979834 40.2373665480427 18.834875444839856 48 19.708422301304864 25.21850533807829 33.631198102016604 21.441874258600237 49 18.457651245551602 22.994780545670228 38.63013048635825 19.91743772241993 50 18.555397390272834 23.40094899169632 36.92692763938316 21.116725978647686 51 18.367497034400948 21.898695136417558 35.13760379596679 24.596204033214708 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 70.0 1 1181.5 2 2293.0 3 26688.0 4 51083.0 5 38485.5 6 25888.0 7 24555.0 8 23222.0 9 22376.0 10 21530.0 11 20782.5 12 20035.0 13 18682.0 14 17329.0 15 16409.5 16 15490.0 17 14193.0 18 12896.0 19 12116.0 20 11336.0 21 10616.5 22 9897.0 23 9695.0 24 9493.0 25 9481.0 26 10014.0 27 10559.0 28 11576.0 29 12593.0 30 14419.0 31 16245.0 32 17466.0 33 18687.0 34 20739.5 35 22792.0 36 24413.0 37 26034.0 38 27096.5 39 28159.0 40 28973.0 41 29787.0 42 31252.0 43 32717.0 44 34649.5 45 36582.0 46 73417.5 47 110253.0 48 80264.0 49 50275.0 50 46528.5 51 42782.0 52 39650.5 53 36519.0 54 34914.5 55 33310.0 56 30710.0 57 28110.0 58 25818.5 59 23527.0 60 20766.0 61 18005.0 62 15289.5 63 12574.0 64 10586.0 65 8598.0 66 6955.5 67 5313.0 68 4318.0 69 3323.0 70 2748.0 71 2173.0 72 1775.0 73 1377.0 74 1198.0 75 919.5 76 820.0 77 605.5 78 391.0 79 310.0 80 229.0 81 185.5 82 142.0 83 95.5 84 49.0 85 32.5 86 16.0 87 10.0 88 4.0 89 4.0 90 4.0 91 2.0 92 0.0 93 0.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 843000.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.95446974859692 #Duplication Level Percentage of deduplicated Percentage of total 1 82.40077415492311 35.39481560698612 2 5.513362723783165 4.736471446635718 3 2.4315199390775555 3.1333394899865126 4 1.6252981636002144 2.792552832032621 5 1.2498775215872173 2.684391309523471 6 1.0050594554007082 2.590307758353061 7 0.8526477982906927 2.5637523840519725 8 0.7580996820068935 2.6051015885748843 9 0.6147408201000816 2.3765279364194956 >10 3.4256541550383455 22.86017805710807 >50 0.07114641951081338 2.108076890768738 >100 0.045656887400197674 3.583522055418627 >500 0.0028010360368067714 0.7792933236930726 >1k 0.002240828829445417 2.84814444317777 >5k 0.0 0.0 >10k+ 0.0011204144147227086 8.943524877269905 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 23286 2.7622775800711743 No Hit GAATCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTC 18779 2.2276393831553976 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCG 16908 2.005693950177936 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGC 15360 1.8220640569395017 No Hit GAACTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTCT 4927 0.5844602609727164 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTC 3682 0.436773428232503 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTCCGAGAAT 3400 0.4033214709371293 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTCCGAGAATCGTA 3066 0.3637010676156584 No Hit GCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTCTGC 3001 0.3559905100830368 No Hit GAATGACTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCT 2810 0.33333333333333337 No Hit GAATGCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTT 1449 0.17188612099644127 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCTCCGAGAATCGT 1337 0.15860023724792408 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.05219454329774614 0.0 2 0.0 0.0 0.0 0.4889679715302491 0.0 3 0.0 0.0 0.0 0.560023724792408 0.0 4 0.0 0.0 0.0 1.2830367734282324 0.0 5 0.0 0.0 0.0 4.032384341637011 0.0 6 0.0 0.0 0.0 4.304863582443653 0.0 7 0.0 0.0 0.0 4.771055753262159 0.0 8 0.0 0.0 0.0 5.35741399762752 0.0 9 0.0 0.0 0.0 5.450771055753262 0.0 10 0.0 0.0 0.0 7.948042704626334 0.0 11 0.0 0.0 0.0 8.11779359430605 0.0 12 0.0 0.0 0.0 10.4570581257414 0.0 13 0.0 0.0 0.0 10.659193357058125 0.0 14 0.0 0.0 0.0 10.797746144721234 0.0 15 0.0 0.0 0.0 11.280782918149466 0.0 16 0.0 0.0 0.0 11.529300118623961 0.0 17 0.0 0.0 0.0 11.645077105575327 0.0 18 0.0 0.0 0.0 11.746263345195729 0.0 19 0.0 0.0 0.0 12.343179122182681 0.0 20 0.0 0.0 0.0 12.487307236061685 0.0 21 0.0 0.0 0.0 12.607710557532622 0.0 22 0.0 0.0 0.0 12.836061684460262 0.0 23 0.0 0.0 0.0 12.96073546856465 0.0 24 0.0 0.0 0.0 13.069276393831554 0.0 25 0.0 0.0 0.0 13.155871886120996 0.0 26 0.0 0.0 0.0 13.272479240806643 0.0 27 0.0 0.0 0.0 13.419335705812575 0.0 28 0.0 0.0 0.0 13.520759193357058 0.0 29 0.0 0.0 0.0 13.631553973902728 0.0 30 0.0 0.0 0.0 13.779596678529062 0.0 31 0.0 0.0 0.0 13.904270462633452 0.0 32 0.0 0.0 0.0 14.041518386714117 0.0 33 0.0 0.0 0.0 14.175800711743772 0.0 34 0.0 0.0 0.0 14.344246737841043 0.0 35 0.0 0.0 0.0 14.499762752075918 0.0 36 0.0 0.0 0.0 14.655160142348754 0.0 37 0.0 0.0 0.0 14.81103202846975 0.0 38 0.0 0.0 0.0 14.980308422301304 0.0 39 0.0 0.0 0.0 15.224080664294187 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTGAACG 20 7.032216E-4 45.0 17 GCGATCG 35 1.2114106E-7 45.0 9 CGTTTTT 20895 0.0 44.321606 1 TGATACC 1935 0.0 42.09302 4 GATACCT 1965 0.0 41.67939 5 CGGCTGT 2090 0.0 41.44737 9 TACGGCT 2055 0.0 41.16788 7 ACGGCTG 2055 0.0 41.16788 8 GAATCTG 2290 0.0 40.97162 1 CGATGAA 575 0.0 40.695652 19 CGCTTTT 655 0.0 40.53435 1 ATGATAC 6685 0.0 40.186985 3 ATACCTG 2040 0.0 40.14706 6 GCGAGAC 460 0.0 40.1087 21 ACCGGTG 90 0.0 40.0 17 CGACCAC 1530 0.0 39.852943 12 GAATGAT 7080 0.0 39.819916 1 CGAGACA 465 0.0 39.67742 22 GCGACCT 210 0.0 39.642857 11 AATGATA 6690 0.0 39.5852 2 >>END_MODULE