SRR2933331.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933331.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	413619
Sequences flagged as poor quality	0
Sequence length	51
%GC	35

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	30156	7.2907675904636875	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCAGAAGCAGTCGTATGCCG	4184	1.0115589467601827	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCAGAAGCAGTCGTATGC	3297	0.7971103841941498	No Hit
GAATCTGTCTCTTATACACATCTGACGCAGAAGCAGTCGTATGCCGTCTTC	2803	0.6776767991799216	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAGAAGCAGT	852	0.20598666889093584	No Hit
GCTGTCTCTTATACACATCTGACGCAGAAGCAGTCGTATGCCGTCTTCTGC	829	0.20042599590444346	No Hit
GAACTGTCTCTTATACACATCTGACGCAGAAGCAGTCGTATGCCGTCTTCT	716	0.17310616775341559	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA	506	0.1223348057028328	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCAGAAGCAGTCGTATGCCGTC	494	0.11943358501422807	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA	424	0.1025097976640338	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCGTTGA	45	3.8380676E-10	45.000004	24
CCGGGTC	30	2.16212E-6	45.000004	5
TAATCGT	45	3.8380676E-10	45.000004	21
GGTTTCG	20	7.028044E-4	45.0	1
TTCGTAC	20	7.028044E-4	45.0	33
CGATTCC	20	7.028044E-4	45.0	10
TCGTACA	20	7.028044E-4	45.0	34
TTACGGG	25	3.8864608E-5	45.0	3
GGCGATA	20	7.028044E-4	45.0	8
ACCCCGA	20	7.028044E-4	45.0	39
GACTCAA	25	3.8864608E-5	45.0	9
CGTTTTT	13775	0.0	44.542652	1
GATACCT	605	0.0	42.39669	5
TGGGCGA	505	0.0	41.88119	6
CACGGGA	70	0.0	41.785713	4
TGATACC	615	0.0	41.707317	4
GCGATTC	65	0.0	41.53846	9
CACCGGT	60	3.6379788E-12	41.250004	16
GACACGA	280	0.0	40.98214	25
AGACACG	280	0.0	40.98214	24