##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933331.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 413619 Sequences flagged as poor quality 0 Sequence length 51 %GC 35 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.084135399969536 31.0 28.0 31.0 23.0 33.0 2 29.599455054047322 31.0 30.0 33.0 22.0 34.0 3 29.753449430514557 31.0 30.0 33.0 16.0 34.0 4 32.61841694893126 35.0 32.0 37.0 22.0 37.0 5 33.83501241480686 35.0 33.0 37.0 30.0 37.0 6 33.40445192314667 35.0 35.0 37.0 28.0 37.0 7 32.215507508117376 35.0 31.0 35.0 25.0 37.0 8 33.46588043586006 35.0 33.0 37.0 28.0 37.0 9 33.13351175840568 35.0 31.0 37.0 25.0 39.0 10 31.695734480282578 35.0 27.0 39.0 15.0 39.0 11 32.48843984439787 37.0 30.0 39.0 15.0 39.0 12 33.282898029345844 37.0 31.0 39.0 23.0 39.0 13 33.39123686291007 37.0 32.0 39.0 23.0 39.0 14 33.64596645705347 37.0 31.0 40.0 19.0 41.0 15 34.371494056124114 37.0 32.0 40.0 25.0 41.0 16 34.59113822140666 37.0 32.0 40.0 25.0 41.0 17 32.738421107347584 36.0 29.0 40.0 18.0 41.0 18 33.370696220434745 36.0 31.0 39.0 23.0 39.0 19 33.09227574168498 36.0 31.0 37.0 23.0 39.0 20 32.76828675665286 35.0 31.0 36.0 25.0 39.0 21 32.84043044444283 35.0 31.0 37.0 24.0 39.0 22 32.92587622909006 34.0 31.0 37.0 25.0 39.0 23 34.0953171880402 35.0 33.0 38.0 27.0 40.0 24 32.16798551323803 34.0 31.0 37.0 21.0 39.0 25 31.23061561485328 34.0 29.0 37.0 18.0 39.0 26 30.44692337634393 33.0 25.0 37.0 18.0 39.0 27 32.289865794366314 34.0 30.0 37.0 22.0 39.0 28 32.45474941915144 35.0 31.0 37.0 21.0 39.0 29 32.627550958732556 35.0 31.0 38.0 22.0 40.0 30 31.55226428186326 35.0 30.0 37.0 18.0 40.0 31 31.9663168278053 35.0 30.0 37.0 21.0 40.0 32 31.685304591907045 35.0 30.0 37.0 18.0 40.0 33 31.52667309770586 35.0 30.0 38.0 15.0 40.0 34 30.444894939545815 35.0 27.0 38.0 10.0 40.0 35 29.810103017511285 35.0 25.0 38.0 8.0 40.0 36 29.056568968059977 34.0 22.0 38.0 7.0 40.0 37 29.083559991199632 34.0 22.0 38.0 7.0 40.0 38 29.111958106373258 34.0 22.0 38.0 7.0 40.0 39 28.72581288577169 34.0 21.0 38.0 7.0 40.0 40 28.613939398335184 34.0 21.0 38.0 7.0 40.0 41 28.256716930315097 33.0 20.0 38.0 7.0 40.0 42 28.502711432501894 34.0 21.0 38.0 7.0 40.0 43 28.500595959083117 34.0 20.0 38.0 7.0 40.0 44 28.38618632122799 34.0 20.0 38.0 7.0 40.0 45 28.535613692794577 34.0 20.0 38.0 7.0 40.0 46 28.37352007523832 34.0 20.0 38.0 7.0 40.0 47 28.41709399229726 34.0 20.0 38.0 7.0 40.0 48 28.161051595792262 34.0 20.0 37.0 7.0 40.0 49 27.87813422497516 33.0 20.0 37.0 7.0 39.0 50 28.113839064453035 34.0 20.0 37.0 7.0 40.0 51 26.76284455017782 32.0 18.0 36.0 7.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 15.0 10 13.0 11 26.0 12 38.0 13 50.0 14 113.0 15 226.0 16 417.0 17 804.0 18 1339.0 19 2291.0 20 3516.0 21 4825.0 22 6822.0 23 9646.0 24 13503.0 25 18428.0 26 23242.0 27 25072.0 28 23491.0 29 23592.0 30 24868.0 31 27813.0 32 31083.0 33 35072.0 34 39556.0 35 43925.0 36 32472.0 37 17453.0 38 3834.0 39 72.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 18.126343325620923 2.465554048532587 35.84071331345997 43.56738931238652 2 44.21532859950824 7.105331234783701 34.70367657191763 13.975663593790422 3 12.61934292186771 7.115001970412384 65.94547155715767 14.320183550562232 4 11.108048711495362 2.8035462587550377 69.21248782091732 16.875917208832284 5 15.34455622203042 3.150242131043303 65.69910956701699 15.80609207990929 6 13.916430338064743 7.0415043796343975 67.12699368259194 11.915071599708911 7 53.69627604147779 1.0147019358395044 42.90276800630532 2.386254016377391 8 55.81005708151705 4.5121234759525075 37.35756819681881 2.320251245711633 9 51.96980796336725 2.5216443151789445 37.57443444329201 7.934113278161786 10 27.264946726335104 21.008464311359003 42.03143472616103 9.695154236144859 11 19.978772735295042 16.067927247055867 52.08053788631567 11.872762131333426 12 17.53570314709914 15.567466678271549 52.91149584521021 13.985334329419102 13 16.17793186483213 15.903524741368264 56.12290537910493 11.795638014694683 14 14.145385004073797 16.469262775646186 54.32028025791852 15.065071962361499 15 12.473314813874605 15.496145003010017 57.50050166941074 14.53003851370464 16 15.137360711185899 15.920932065499894 52.35325263104451 16.5884545922697 17 15.260904358842318 16.110720252212786 54.49411173084408 14.134263658100812 18 15.74758412935576 14.714024259040325 53.92353832875182 15.614853282852092 19 15.179186642779948 17.727909017719206 51.43018091528677 15.66272342421407 20 16.824178773218833 18.25979947729674 53.37013048240047 11.54589126708396 21 16.597641791116946 19.193992539027462 51.81701034043407 12.39135532942152 22 15.446098946131585 15.583423392058876 53.66412084551242 15.306356816297123 23 14.436232378106423 19.21696053614558 52.95332177680425 13.39348530894374 24 14.502476917162896 17.13775237597886 53.17623223304538 15.183538473812858 25 14.80565447912209 19.669792731958637 50.41427013749369 15.110282651425589 26 14.514565336698748 17.5690671850181 52.04669031161527 15.869677166667875 27 14.73820109811203 17.185138980559405 51.7848551444687 16.291804776859863 28 12.372739163336307 19.142737640195445 52.756522306760566 15.728000889707678 29 15.429900463953542 18.510996835251767 50.70318336440057 15.355919336394122 30 15.947768356869485 18.460225473201184 52.03726134437731 13.554744825552017 31 16.550013418145685 18.924662551768655 49.65705153776785 14.86827249231781 32 17.279670421329772 20.659834291945003 48.36890955202735 13.691585734697876 33 17.1836883702151 19.530775907296327 46.06703270401022 17.21850301847836 34 16.23112091078988 23.267306385828505 45.36856382322863 15.13300888015299 35 16.628104608347297 24.71960910886589 42.70959506212239 15.942691220664429 36 17.88046487226167 26.278048155428063 40.137421153283576 15.704065819026688 37 18.33305529968401 25.857371155580378 40.069484235492084 15.74008930924353 38 19.459454232034794 25.052765951273997 40.31004378425556 15.177736032435648 39 18.64396945014615 24.038547552215928 38.98031763531172 18.3371653623262 40 20.9630118539042 23.941598427538388 39.533725481663076 15.561664236894341 41 19.055459251146587 23.997446925794026 38.88965448879282 18.057439334266558 42 18.019965233705413 24.849680503071667 40.54335028129753 16.587003981925395 43 19.770368382496937 22.715590918212172 39.322419908176364 18.19162079111453 44 20.02398342435913 23.251591440431895 38.32488352807778 18.3995416071312 45 17.81881393262882 23.349507638672304 38.549002826272485 20.282675602426387 46 18.95149884313825 24.16934425159386 37.83167601101497 19.047480894252924 47 16.941919979498042 23.357727763956685 42.06141400660995 17.638938249935325 48 17.70880931485256 24.29337143603171 38.3210152338263 19.676804015289434 49 17.42545676093216 23.489975073678917 39.83206767580793 19.252500489580992 50 17.966534419356943 22.293705076410898 39.99574487632338 19.744015627908777 51 17.277736274204038 21.966834212161434 38.9558990278493 21.799530485785226 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 55.0 1 388.0 2 721.0 3 23049.0 4 45377.0 5 30228.5 6 15080.0 7 14179.0 8 13278.0 9 12816.5 10 12355.0 11 11590.5 12 10826.0 13 9999.5 14 9173.0 15 8461.0 16 7749.0 17 7152.0 18 6555.0 19 6005.0 20 5455.0 21 5000.5 22 4546.0 23 4485.0 24 4424.0 25 4378.5 26 4756.5 27 5180.0 28 5630.0 29 6080.0 30 6680.5 31 7281.0 32 7838.0 33 8395.0 34 9319.5 35 10244.0 36 10746.5 37 11249.0 38 12151.0 39 13053.0 40 13463.5 41 13874.0 42 14619.5 43 15365.0 44 16163.0 45 16961.0 46 24002.0 47 31043.0 48 27379.0 49 23715.0 50 22898.0 51 22081.0 52 20571.0 53 19061.0 54 17794.5 55 16528.0 56 15177.0 57 13826.0 58 12818.5 59 11811.0 60 10257.0 61 8703.0 62 7554.0 63 6405.0 64 5384.5 65 4364.0 66 3606.0 67 2848.0 68 2359.5 69 1871.0 70 1548.5 71 1226.0 72 1044.5 73 863.0 74 802.5 75 608.5 76 475.0 77 373.5 78 272.0 79 182.5 80 93.0 81 67.0 82 41.0 83 31.0 84 21.0 85 15.5 86 10.0 87 6.5 88 3.0 89 4.0 90 5.0 91 3.5 92 2.0 93 1.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 413619.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.700448062772864 #Duplication Level Percentage of deduplicated Percentage of total 1 78.8568723781552 41.557925071576754 2 9.06181798430924 9.551237360727802 3 4.380568741297139 6.925738063084083 4 2.6194739621121275 5.52189805968304 5 1.6209844288150466 4.271330285066545 6 1.067765785854465 3.3763041204377444 7 0.7179277715514899 2.648458066623008 8 0.456182537229852 1.9232819288340615 9 0.3133309709628803 1.4861414305518719 >10 0.8071797189135066 6.599425247512067 >50 0.05901847282621228 2.1295680771027303 >100 0.03513004334889863 3.3095072690034653 >500 0.0018736023119412602 0.7166032372579293 >1k 0.0014052017339559453 2.538597207013622 >5k 0.0 0.0 >10k+ 4.6840057798531505E-4 7.443984575525358 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 30156 7.2907675904636875 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGAAGCAGTCGTATGCCG 4184 1.0115589467601827 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAGAAGCAGTCGTATGC 3297 0.7971103841941498 No Hit GAATCTGTCTCTTATACACATCTGACGCAGAAGCAGTCGTATGCCGTCTTC 2803 0.6776767991799216 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAGAAGCAGT 852 0.20598666889093584 No Hit GCTGTCTCTTATACACATCTGACGCAGAAGCAGTCGTATGCCGTCTTCTGC 829 0.20042599590444346 No Hit GAACTGTCTCTTATACACATCTGACGCAGAAGCAGTCGTATGCCGTCTTCT 716 0.17310616775341559 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 506 0.1223348057028328 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAGAAGCAGTCGTATGCCGTC 494 0.11943358501422807 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA 424 0.1025097976640338 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.05705734020922636 0.0 2 0.0 0.0 0.0 0.3527400820561918 0.0 3 0.0 0.0 0.0 0.46637122569321043 0.0 4 0.0 0.0 0.0 0.8096823405114368 0.0 5 0.0 0.0 0.0 1.7666016309695638 0.0 6 0.0 0.0 0.0 2.1232100072772284 0.0 7 0.0 0.0 0.0 2.4648287433604357 0.0 8 0.0 0.0 0.0 2.875109702407288 0.0 9 0.0 0.0 0.0 3.1323512701302407 0.0 10 0.0 0.0 0.0 4.727539112081408 0.0 11 0.0 0.0 0.0 5.172634719391517 0.0 12 0.0 0.0 0.0 6.377124841943915 0.0 13 0.0 0.0 0.0 6.54370326314797 0.0 14 0.0 0.0 0.0 6.660719164255027 0.0 15 0.0 0.0 0.0 6.895476271641293 0.0 16 0.0 0.0 0.0 7.032558949177867 0.0 17 0.0 0.0 0.0 7.182213583031727 0.0 18 0.0 0.0 0.0 7.318087418614716 0.0 19 0.0 0.0 0.0 7.703949770199145 0.0 20 0.0 0.0 0.0 7.845626047159342 0.0 21 0.0 0.0 0.0 7.986818787338106 0.0 22 0.0 0.0 0.0 8.21190515909569 0.0 23 0.0 0.0 0.0 8.392264378570617 0.0 24 0.0 0.0 0.0 8.533698887140098 0.0 25 0.0 0.0 0.0 8.652407166982174 0.0 26 0.0 0.0 0.0 8.770873678433535 0.0 27 0.0 0.0 0.0 8.900945072639313 0.0 28 0.0 0.0 0.0 9.023521646732863 0.0 29 0.0 0.0 0.0 9.160120787488003 0.0 30 0.0 0.0 0.0 9.341688848916515 0.0 31 0.0 0.0 0.0 9.476112074155202 0.0 32 0.0 0.0 0.0 9.620689571804004 0.0 33 0.0 0.0 0.0 9.767201216578542 0.0 34 0.0 0.0 0.0 9.930878417093993 0.0 35 0.0 0.0 0.0 10.128161423919114 0.0 36 0.0 0.0 0.0 10.288212098573808 0.0 37 0.0 0.0 0.0 10.45503228816858 0.0 38 0.0 0.0 0.0 10.686404638084808 0.0 39 0.0 0.0 0.0 11.070574610934218 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTTGA 45 3.8380676E-10 45.000004 24 CCGGGTC 30 2.16212E-6 45.000004 5 TAATCGT 45 3.8380676E-10 45.000004 21 GGTTTCG 20 7.028044E-4 45.0 1 TTCGTAC 20 7.028044E-4 45.0 33 CGATTCC 20 7.028044E-4 45.0 10 TCGTACA 20 7.028044E-4 45.0 34 TTACGGG 25 3.8864608E-5 45.0 3 GGCGATA 20 7.028044E-4 45.0 8 ACCCCGA 20 7.028044E-4 45.0 39 GACTCAA 25 3.8864608E-5 45.0 9 CGTTTTT 13775 0.0 44.542652 1 GATACCT 605 0.0 42.39669 5 TGGGCGA 505 0.0 41.88119 6 CACGGGA 70 0.0 41.785713 4 TGATACC 615 0.0 41.707317 4 GCGATTC 65 0.0 41.53846 9 CACCGGT 60 3.6379788E-12 41.250004 16 GACACGA 280 0.0 40.98214 25 AGACACG 280 0.0 40.98214 24 >>END_MODULE