SRR2933330.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933330.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	753365
Sequences flagged as poor quality	0
Sequence length	51
%GC	32

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	28673	3.8059904561533915	No Hit
GAATCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTC	14703	1.9516436255998089	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCG	12749	1.6922739973319705	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGC	9943	1.3198117778234986	No Hit
GAACTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCT	3384	0.44918465816702396	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTC	2549	0.3383486092398771	No Hit
GCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCTGC	2376	0.31538497275557	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGGCGAAAAT	2275	0.3019784566577954	No Hit
GAATGACTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCT	2076	0.2755636378116849	No Hit
GAATGCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTT	1829	0.24277740537455286	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGGCGAAAATCGTA	1767	0.23454766281948325	No Hit
GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCGGCGAAAATCGT	903	0.11986221818109416	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA	900	0.11946400483165531	No Hit
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	782	0.10380094642039384	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGCATGG	25	3.8895218E-5	45.0	2
TACGCCT	35	1.2111741E-7	45.0	7
CGAGGGT	20	7.0317386E-4	45.0	4
CGCACGG	20	7.0317386E-4	45.0	2
GCCGTTG	20	7.0317386E-4	45.0	1
CGTTTTT	29435	0.0	44.510788	1
TACGGCT	1150	0.0	42.847824	7
ACGGCTG	1155	0.0	42.662334	8
GATACCT	1570	0.0	42.27707	5
GCGACCT	165	0.0	42.272728	11
CGATGAA	395	0.0	42.1519	19
TGATACC	1595	0.0	42.037617	4
CGCTTTT	740	0.0	41.959457	1
CGGCTGT	1195	0.0	41.422596	9
CCGATGA	420	0.0	40.714287	18
AATCTGT	1805	0.0	40.63712	2
ATACCTG	1645	0.0	40.34954	6
CGGTAGT	95	0.0	40.263157	12
GAATCTG	1835	0.0	39.97275	1
TACCTGT	1675	0.0	39.895523	7