##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933330.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 753365 Sequences flagged as poor quality 0 Sequence length 51 %GC 32 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.732741765279776 31.0 28.0 33.0 25.0 34.0 2 29.2675104365082 31.0 30.0 33.0 16.0 34.0 3 29.188080147073464 31.0 28.0 34.0 16.0 34.0 4 33.5243261898283 35.0 32.0 37.0 28.0 37.0 5 34.461042124335485 35.0 35.0 37.0 32.0 37.0 6 34.10820120393169 35.0 35.0 37.0 28.0 37.0 7 34.04358179634042 35.0 33.0 37.0 30.0 37.0 8 33.99687402520691 35.0 35.0 37.0 28.0 37.0 9 35.23830015994903 37.0 34.0 39.0 30.0 39.0 10 35.221029646983865 37.0 34.0 39.0 28.0 39.0 11 35.60155966895197 37.0 34.0 39.0 30.0 39.0 12 35.72324304951783 37.0 35.0 39.0 30.0 39.0 13 35.94870082894746 37.0 35.0 39.0 31.0 39.0 14 36.72150551193644 39.0 36.0 41.0 30.0 41.0 15 37.124534588147846 39.0 36.0 41.0 31.0 41.0 16 37.020457547138506 39.0 36.0 41.0 31.0 41.0 17 36.23078852880078 38.0 34.0 41.0 29.0 41.0 18 35.883328798125746 38.0 34.0 39.0 29.0 40.0 19 35.039477544085535 37.0 34.0 37.0 27.0 40.0 20 34.16041228355445 35.0 33.0 37.0 27.0 40.0 21 34.27850377970837 35.0 33.0 38.0 29.0 40.0 22 34.57613241921246 35.0 33.0 38.0 29.0 40.0 23 34.96194938708329 35.0 33.0 39.0 30.0 40.0 24 34.27016917430462 35.0 33.0 38.0 27.0 40.0 25 33.282200526969 35.0 33.0 37.0 24.0 40.0 26 33.14345503175751 35.0 32.0 38.0 23.0 40.0 27 34.05928069395313 35.0 33.0 38.0 25.0 40.0 28 33.80372064006159 35.0 33.0 38.0 24.0 40.0 29 33.60038095743763 35.0 33.0 38.0 23.0 40.0 30 32.73626329866665 35.0 32.0 38.0 20.0 40.0 31 32.52315278782529 35.0 32.0 38.0 18.0 40.0 32 31.482823067171957 35.0 30.0 38.0 15.0 40.0 33 30.20590683135001 35.0 23.0 39.0 8.0 40.0 34 29.066906479594884 35.0 20.0 39.0 7.0 40.0 35 28.334662481001907 35.0 16.0 39.0 7.0 40.0 36 27.610467701578916 35.0 15.0 39.0 7.0 40.0 37 27.34618146582334 34.0 12.0 39.0 7.0 40.0 38 27.04201018098797 34.0 10.0 39.0 7.0 40.0 39 26.57831462836739 33.0 10.0 38.0 7.0 40.0 40 26.34220729659594 33.0 10.0 38.0 7.0 40.0 41 26.088289209081918 32.0 10.0 38.0 7.0 40.0 42 26.081842134954503 33.0 10.0 38.0 7.0 40.0 43 25.917914954902336 32.0 10.0 38.0 7.0 40.0 44 25.836808187266463 33.0 10.0 38.0 7.0 40.0 45 25.900291359434007 33.0 10.0 38.0 7.0 40.0 46 25.67333629781049 32.0 10.0 38.0 7.0 40.0 47 25.514239445687018 31.0 10.0 38.0 7.0 40.0 48 25.404274156617312 31.0 10.0 37.0 7.0 40.0 49 25.513573102015624 32.0 10.0 37.0 7.0 40.0 50 25.49337173879859 31.0 10.0 37.0 7.0 40.0 51 24.669857240514226 30.0 10.0 36.0 7.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 8.0 9 27.0 10 21.0 11 39.0 12 54.0 13 86.0 14 131.0 15 243.0 16 464.0 17 1020.0 18 2032.0 19 3754.0 20 6000.0 21 9195.0 22 13758.0 23 20436.0 24 30802.0 25 45155.0 26 56143.0 27 53447.0 28 44118.0 29 36297.0 30 32745.0 31 33162.0 32 35426.0 33 40833.0 34 46603.0 35 53476.0 36 57858.0 37 65579.0 38 55764.0 39 8687.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 20.307951656899377 2.173448461237249 26.699674128742373 50.818925753121 2 49.366376192151215 11.469739103887227 26.854048170541507 12.309836533420055 3 9.67977009815959 11.608582825058239 65.85904574807697 12.85260132870521 4 8.282970406111248 2.2732672741632545 76.05078547583177 13.39297684389373 5 15.264712324039476 2.7638661206719184 68.55893225727237 13.412489298016233 6 10.926443357469488 9.826710824102527 70.44420699129904 8.802638827128948 7 44.04611310586502 0.8122224950721099 53.288512208557606 1.8531521905052664 8 43.85284689360403 6.704452688935642 47.22770503009829 2.214995387362036 9 41.1927817193525 2.1106634898090566 46.58392678183882 10.112628008999621 10 22.408925288538757 13.897911370982193 53.445275530453365 10.247887810025686 11 16.880263882712896 14.2977175738188 57.2442308841 11.577787659368301 12 12.36824115800442 13.011355717348163 60.50679285605251 14.113610268594904 13 12.71110285187127 13.423506534017376 64.25782986998334 9.607560744128012 14 12.00321225435214 17.260690369210145 58.620456219760676 12.115641156677043 15 10.18058975397052 14.20161541882089 64.17062114645623 11.447173680752359 16 11.317356128835291 15.354841278795803 58.00256183921473 15.325240753154182 17 11.604998904913288 15.490101079821866 60.69023647236067 12.21466354290417 18 11.99750452967685 14.598235914861988 59.891155017820054 13.513104537641116 19 11.743975363867449 16.309093201834436 57.54554565184207 14.401385782456048 20 13.404525031027456 15.670624464900811 60.795364796612525 10.1294857074592 21 13.105599543382027 18.08114260683732 58.65257876328207 10.160679086498577 22 12.163028545260266 12.957995128523358 60.186496585320526 14.692479740895848 23 11.973080777577934 17.574217013001668 59.54842606173635 10.904276147684056 24 13.143828024928156 15.102904966384155 58.118176448335134 13.63509056035255 25 11.011528276466255 20.649087759585328 56.63244244157878 11.706941522369634 26 12.040246095849954 14.586422252161968 59.2818885931786 14.091443058809475 27 14.136042953946626 15.702348795072773 56.74181837489132 13.41978987608928 28 11.165105891566505 15.894154891719154 59.37692884591135 13.563810370802997 29 16.755888579904827 13.867381680858548 56.218831509294965 13.157898229941662 30 14.42488037007294 17.01406356812435 56.58638243082702 11.974673630975689 31 14.537707485747282 15.156663768558401 53.92233512308111 16.38329362261321 32 16.84535384574542 18.330025950236607 51.89848214344972 12.92613806056825 33 13.80512766056294 20.213442355299225 48.085058371440134 17.896371612697695 34 17.21250655392804 22.564228494819908 45.90138910090062 14.321875850351423 35 16.080253263690242 24.409549156119546 42.84921651523498 16.660981064955234 36 17.063176547888474 24.440344321809484 40.20773463062393 18.28874449967811 37 19.353036044945014 23.825237434709603 41.516130959096856 15.30559556124853 38 17.37935794734292 26.19646519283482 39.129372880343524 17.29480397947874 39 20.553118342370563 24.79117028266511 38.5284689360403 16.12724243892403 40 18.553423639271802 26.81051017766952 39.62063541576792 15.015430767290756 41 17.567845599410646 28.487386592156522 37.766554060780635 16.1782137476522 42 17.4194447578531 26.223543700596657 40.20255785708123 16.15445368446902 43 19.650103203626397 24.59100170568051 37.961413126439375 17.797481964253713 44 19.977700052431423 24.395478951106035 36.723102347467695 18.903718648994843 45 17.33183782097655 23.6717925573925 37.62386094389837 21.372508677732576 46 20.638468736933625 24.55502976644787 36.61598295646865 18.19051854014986 47 16.87893650488143 23.441227028067406 41.81359633112767 17.86624013592349 48 18.25954218738593 24.850238596165205 36.481652319924606 20.40856689652426 49 17.100608602735726 23.45104962402023 40.119596742614796 19.328745030629243 50 17.910043604361764 22.76877741864833 39.02092611151301 20.300252865476896 51 17.99698685232258 22.596085562775016 37.12423592813576 22.28269165676664 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 58.0 1 1152.0 2 2246.0 3 30582.0 4 58918.0 5 45071.0 6 31224.0 7 30281.0 8 29338.0 9 28946.5 10 28555.0 11 27842.5 12 27130.0 13 26244.5 14 25359.0 15 24275.5 16 23192.0 17 22015.5 18 20839.0 19 19460.0 20 18081.0 21 16941.5 22 15802.0 23 15002.0 24 14202.0 25 13424.0 26 12410.0 27 12174.0 28 12251.5 29 12329.0 30 12910.0 31 13491.0 32 14236.5 33 14982.0 34 15893.0 35 16804.0 36 17737.5 37 18671.0 38 19570.5 39 20470.0 40 21441.0 41 22412.0 42 23299.0 43 24186.0 44 25950.5 45 27715.0 46 54442.5 47 81170.0 48 59311.5 49 37453.0 50 34933.0 51 32413.0 52 29320.5 53 26228.0 54 24447.5 55 22667.0 56 20606.5 57 18546.0 58 16623.5 59 14701.0 60 12541.5 61 10382.0 62 8810.0 63 7238.0 64 5904.5 65 4571.0 66 3624.0 67 2677.0 68 2169.5 69 1662.0 70 1329.5 71 997.0 72 802.0 73 607.0 74 562.0 75 463.0 76 409.0 77 289.5 78 170.0 79 119.0 80 68.0 81 52.5 82 37.0 83 28.0 84 19.0 85 11.5 86 4.0 87 3.5 88 3.0 89 2.0 90 1.0 91 0.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 753365.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.493184390786865 #Duplication Level Percentage of deduplicated Percentage of total 1 83.48810083284744 48.834848764523514 2 7.628222127817496 8.923980069926186 3 3.6445130385781206 6.395375195405309 4 1.990266484387411 4.656680978323038 5 1.1789918315925838 3.448149330028827 6 0.6688134423959156 2.347261680546072 7 0.41969921118746406 1.7184680344059295 8 0.24987888928305468 1.1692969556958988 9 0.1528360927460995 0.8045882779108501 >10 0.5037368495807384 4.899844527175434 >50 0.03792768841642182 1.5510844890841116 >100 0.03244394188777851 3.3996444470716995 >500 0.002056306175793197 0.8486414905934627 >1k 0.0015993492478391534 2.1725222159192645 >5k 2.284784639770219E-4 1.3288255655072125 >10k+ 6.854353919310657E-4 7.500787977883165 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 28673 3.8059904561533915 No Hit GAATCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTC 14703 1.9516436255998089 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCG 12749 1.6922739973319705 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGC 9943 1.3198117778234986 No Hit GAACTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCT 3384 0.44918465816702396 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTC 2549 0.3383486092398771 No Hit GCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCTGC 2376 0.31538497275557 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGGCGAAAAT 2275 0.3019784566577954 No Hit GAATGACTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCT 2076 0.2755636378116849 No Hit GAATGCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTT 1829 0.24277740537455286 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGGCGAAAATCGTA 1767 0.23454766281948325 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCGGCGAAAATCGT 903 0.11986221818109416 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 900 0.11946400483165531 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 782 0.10380094642039384 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.3273778314628368E-4 0.0 0.0 0.036104677015789156 0.0 2 1.3273778314628368E-4 0.0 0.0 0.4138764078501125 0.0 3 1.3273778314628368E-4 0.0 0.0 0.4886077797614702 0.0 4 1.3273778314628368E-4 0.0 0.0 1.0447790911443988 0.0 5 1.3273778314628368E-4 0.0 0.0 3.393043212785303 0.0 6 1.3273778314628368E-4 0.0 0.0 3.7713458947522116 0.0 7 1.3273778314628368E-4 0.0 0.0 4.186947893783226 0.0 8 1.3273778314628368E-4 0.0 0.0 4.676219362460428 0.0 9 1.3273778314628368E-4 0.0 0.0 4.785329820206672 0.0 10 1.3273778314628368E-4 0.0 0.0 6.865463619892084 0.0 11 1.3273778314628368E-4 0.0 0.0 6.99992699421927 0.0 12 1.3273778314628368E-4 0.0 0.0 8.664989746006253 0.0 13 1.3273778314628368E-4 0.0 0.0 8.801576924863777 0.0 14 1.3273778314628368E-4 0.0 0.0 8.908829053645976 0.0 15 1.3273778314628368E-4 0.0 0.0 9.226072355365593 0.0 16 1.3273778314628368E-4 0.0 0.0 9.415223696349047 0.0 17 1.3273778314628368E-4 0.0 0.0 9.514511558142468 0.0 18 1.3273778314628368E-4 0.0 0.0 9.586322698824606 0.0 19 1.3273778314628368E-4 0.0 0.0 10.023295480942172 0.0 20 1.3273778314628368E-4 0.0 0.0 10.113158960132207 0.0 21 1.3273778314628368E-4 0.0 0.0 10.182979034067152 0.0 22 1.3273778314628368E-4 0.0 0.0 10.320097164057263 0.0 23 1.3273778314628368E-4 0.0 0.0 10.39841245611357 0.0 24 1.3273778314628368E-4 0.0 0.0 10.473276565808074 0.0 25 1.3273778314628368E-4 0.0 0.0 10.52915917251266 0.0 26 1.3273778314628368E-4 0.0 0.0 10.612916713677965 0.0 27 1.3273778314628368E-4 0.0 0.0 10.717912300146676 0.0 28 1.3273778314628368E-4 0.0 0.0 10.783617502804086 0.0 29 1.3273778314628368E-4 0.0 0.0 10.857286972450273 0.0 30 1.3273778314628368E-4 0.0 0.0 10.941973678097602 0.0 31 1.3273778314628368E-4 0.0 0.0 11.023209201383128 0.0 32 1.3273778314628368E-4 0.0 0.0 11.10776316924731 0.0 33 1.3273778314628368E-4 0.0 0.0 11.190193332581153 0.0 34 1.3273778314628368E-4 0.0 0.0 11.306471630617297 0.0 35 1.3273778314628368E-4 0.0 0.0 11.406290443543302 0.0 36 1.3273778314628368E-4 0.0 0.0 11.498012251697384 0.0 37 1.3273778314628368E-4 0.0 0.0 11.601945935900925 0.0 38 1.3273778314628368E-4 0.0 0.0 11.71636590497302 0.0 39 1.3273778314628368E-4 0.0 0.0 11.841670372263113 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCATGG 25 3.8895218E-5 45.0 2 TACGCCT 35 1.2111741E-7 45.0 7 CGAGGGT 20 7.0317386E-4 45.0 4 CGCACGG 20 7.0317386E-4 45.0 2 GCCGTTG 20 7.0317386E-4 45.0 1 CGTTTTT 29435 0.0 44.510788 1 TACGGCT 1150 0.0 42.847824 7 ACGGCTG 1155 0.0 42.662334 8 GATACCT 1570 0.0 42.27707 5 GCGACCT 165 0.0 42.272728 11 CGATGAA 395 0.0 42.1519 19 TGATACC 1595 0.0 42.037617 4 CGCTTTT 740 0.0 41.959457 1 CGGCTGT 1195 0.0 41.422596 9 CCGATGA 420 0.0 40.714287 18 AATCTGT 1805 0.0 40.63712 2 ATACCTG 1645 0.0 40.34954 6 CGGTAGT 95 0.0 40.263157 12 GAATCTG 1835 0.0 39.97275 1 TACCTGT 1675 0.0 39.895523 7 >>END_MODULE