SRR2933329.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933329.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	483624
Sequences flagged as poor quality	0
Sequence length	51
%GC	31

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	34287	7.089598531090269	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCG	5641	1.1664019982465716	No Hit
GAATCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTC	3963	0.8194382412783484	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGC	3776	0.780771839280102	No Hit
GAACTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCT	1367	0.2826576017732784	No Hit
GCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCTGC	1107	0.22889682894149174	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGGCGAAAAT	993	0.20532479777678525	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTC	753	0.15569946900898218	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA	584	0.12075496666832085	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGGCGAAAATCGTA	574	0.11868724463632906	No Hit
GAATGCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTT	543	0.11227730633715449	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCC	522	0.1079350900699717	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA	495	0.10235224058359386	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTTTGCG	40	6.8012014E-9	45.0	1
ATCCGTC	35	1.2099736E-7	45.0	6
CACCCGT	35	1.2099736E-7	45.0	16
ACCGACT	30	2.162884E-6	44.999996	17
ATCCGGC	30	2.162884E-6	44.999996	6
GCGATCG	30	2.162884E-6	44.999996	9
CGTTTTT	20270	0.0	44.555992	1
TACGGCT	630	0.0	41.428574	7
ACCGGTG	60	3.6379788E-12	41.249996	17
ACGGCTG	635	0.0	41.102364	8
GATACCT	800	0.0	41.0625	5
CGACCAC	570	0.0	41.05263	12
CACGTGA	170	0.0	41.029415	43
TCGGGAA	110	0.0	40.909092	5
AGACACG	165	0.0	40.90909	24
CGTGAGG	160	0.0	40.78125	45
GAATGAT	2305	0.0	40.41215	1
CCGATGA	95	0.0	40.263157	18
GTTTTTT	22560	0.0	40.202793	2
CGGCTGT	605	0.0	40.16529	9