##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933329.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 483624 Sequences flagged as poor quality 0 Sequence length 51 %GC 31 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.005487734272908 31.0 28.0 31.0 23.0 33.0 2 29.44877011893537 31.0 30.0 33.0 16.0 34.0 3 29.567254726812564 31.0 30.0 33.0 16.0 34.0 4 32.643439945081305 35.0 32.0 37.0 19.0 37.0 5 33.90712206176699 35.0 33.0 37.0 30.0 37.0 6 33.38670330670107 35.0 35.0 37.0 28.0 37.0 7 32.669627644616476 35.0 32.0 37.0 26.0 37.0 8 33.507013713132515 35.0 33.0 37.0 28.0 37.0 9 33.60242461085471 35.0 32.0 39.0 26.0 39.0 10 32.79984037185913 37.0 31.0 39.0 16.0 39.0 11 33.63698451689743 37.0 31.0 39.0 21.0 39.0 12 34.217540899541795 37.0 32.0 39.0 26.0 39.0 13 34.45533720410898 37.0 32.0 39.0 27.0 39.0 14 34.56760830728003 37.0 32.0 40.0 24.0 41.0 15 35.24756629116835 38.0 32.0 40.0 27.0 41.0 16 35.36961358410666 38.0 33.0 40.0 27.0 41.0 17 33.481673779630455 37.0 31.0 40.0 19.0 41.0 18 33.96080839660563 37.0 32.0 39.0 25.0 39.0 19 33.59132921443105 37.0 32.0 37.0 25.0 39.0 20 32.898559624832515 35.0 32.0 36.0 25.0 39.0 21 32.9936851769143 35.0 32.0 37.0 25.0 39.0 22 32.72063627942369 34.0 30.0 37.0 25.0 39.0 23 33.89343580963724 35.0 33.0 38.0 27.0 40.0 24 32.004360825765474 35.0 31.0 36.0 21.0 39.0 25 31.16993159975518 34.0 28.0 36.0 18.0 39.0 26 29.877944436173557 33.0 24.0 36.0 18.0 39.0 27 32.08864531123352 34.0 30.0 37.0 22.0 39.0 28 32.25925925925926 35.0 31.0 37.0 21.0 39.0 29 32.105342166641854 35.0 30.0 38.0 21.0 40.0 30 31.142255140356973 34.0 27.0 37.0 18.0 40.0 31 31.564326832415265 35.0 30.0 37.0 20.0 39.0 32 31.121540701040477 35.0 30.0 37.0 16.0 39.0 33 30.322196582469026 35.0 25.0 38.0 12.0 40.0 34 28.709882057135296 34.0 21.0 37.0 7.0 40.0 35 27.862477875374257 33.0 18.0 37.0 7.0 40.0 36 27.114289199874282 33.0 15.0 37.0 7.0 40.0 37 27.048868542504096 33.0 15.0 38.0 7.0 40.0 38 26.9845334392007 33.0 15.0 38.0 7.0 40.0 39 26.545233487171853 33.0 13.0 37.0 7.0 40.0 40 26.39352058624055 32.0 13.0 37.0 7.0 40.0 41 26.095429507220484 32.0 12.0 37.0 7.0 40.0 42 26.288703620994823 32.0 12.0 37.0 7.0 40.0 43 26.23704572146957 32.0 12.0 37.0 7.0 40.0 44 26.070579623840008 32.0 10.0 37.0 7.0 40.0 45 26.196549385473013 33.0 10.0 37.0 7.0 40.0 46 25.948118786495293 32.0 10.0 37.0 7.0 40.0 47 25.909177377466794 32.0 10.0 37.0 7.0 40.0 48 25.65883413560948 31.0 10.0 36.0 7.0 39.0 49 25.357668353927846 31.0 10.0 36.0 7.0 39.0 50 25.551163713959603 31.0 10.0 36.0 7.0 39.0 51 24.433142275817577 29.0 10.0 35.0 7.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 2.0 9 11.0 10 14.0 11 17.0 12 30.0 13 53.0 14 107.0 15 251.0 16 537.0 17 1019.0 18 1910.0 19 3177.0 20 5198.0 21 7713.0 22 10826.0 23 15350.0 24 21122.0 25 28876.0 26 34447.0 27 33008.0 28 28848.0 29 26234.0 30 26802.0 31 29542.0 32 32605.0 33 36315.0 34 40274.0 35 44271.0 36 32928.0 37 18218.0 38 3832.0 39 85.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 17.587836831919013 2.190751492895307 28.864572477792667 51.356839197393015 2 51.49682397895886 8.0140770515938 28.0991017815493 12.389997187898036 3 10.323722561328635 7.97375647196996 69.10947347526178 12.593047491439629 4 8.954890576150067 2.3896663523729176 74.81287115610475 13.842571915372273 5 13.676120291796934 2.759375051693051 70.31412833110019 13.250376325409821 6 11.493846459232792 7.216349891651365 71.46543595851323 9.824367690602617 7 45.39745752898946 0.8359800175342827 51.72075827502357 2.0458041784526824 8 46.63292144310456 4.781813971184225 46.15817246455924 2.4270921211519694 9 43.29437745025061 2.1613898400410236 46.1935305113063 8.350702198402065 10 21.84734421782211 15.306519114022462 52.52365474004599 10.322481928109442 11 15.821795444394818 14.976303905513374 57.833358145997714 11.368542504094089 12 12.525019436587101 13.634559078953897 60.440342083932975 13.40007940052603 13 12.500413544406399 14.104138752419235 63.29917456536482 10.096273137809538 14 11.90739086563115 15.40763072138686 59.688725125303954 12.99625328767803 15 10.48645228524639 14.688063454253717 62.98963657717566 11.835847683324236 16 11.369783137313284 14.596463368236481 58.80828908408184 15.225464410368387 17 11.711991133607928 15.026756323093974 60.69405157725837 12.567200966039731 18 11.952467205928572 14.280515441748134 60.075802689692814 13.691214662630474 19 11.885473012092039 16.479951367177808 57.84886606123766 13.7857095594925 20 13.230112649496304 15.884240649760972 60.22405835938663 10.661588341356094 21 13.36451458157577 17.257208079003522 58.27068135576398 11.107595983656724 22 12.336649959472648 14.037764875192298 59.50635204208228 14.119233123252775 23 11.88774750632723 17.61264949630291 58.60131010867947 11.898292888690387 24 12.199353216548394 15.483722892164161 58.6718194299704 13.645104461317056 25 11.3662680098589 18.396729690834203 57.12082113377335 13.116181165533556 26 12.175987957586885 15.755835111574282 58.55044414669247 13.51773278414636 27 12.787826906853258 16.042214613005147 57.50603774833342 13.663920731808183 28 11.518865895819893 16.094527980414536 59.134782392933346 13.251823730832216 29 15.421070914594809 14.338618430847106 56.71244603245496 13.527864622103122 30 13.816518617769177 16.468165351595452 57.17189386796354 12.543422162671828 31 14.058648867715414 15.79408796916613 55.21500173688651 14.93226142623195 32 15.13365755214795 17.927150017368866 53.95079648652672 12.988395943956462 33 13.402974211370816 19.109266703058577 50.91041801068599 16.57734107488462 34 16.264287959241063 21.629199543446976 47.67877524688601 14.42773725042595 35 15.372272674639802 23.44755429838056 44.454783054604405 16.725389972375236 36 16.45886060245149 22.957710949001704 42.32378872843366 18.259639720113146 37 18.045216945395598 23.4121962516335 42.87318247233388 15.669404330637024 38 16.74668750930475 25.11289762294675 41.99171257009578 16.148702297652722 39 18.801589664698195 24.409458587663142 41.007476882867685 15.781474864770978 40 17.909987924503334 25.6798670041189 41.743379154053564 14.6667659173242 41 16.856070004797115 26.511504805386004 40.91773774667924 15.714687443137645 42 16.911484955254497 25.076505715183693 42.21854167700528 15.793467652556531 43 18.432294509784462 23.709121135427523 40.87514267282021 16.983441681967808 44 18.89773873918581 23.544737233884174 39.784626073147734 17.772897953782277 45 16.94353464675037 22.958951582220898 40.120010586736804 19.97750318429193 46 18.827229417894895 23.848072055977372 39.086769887350506 18.23792863877723 47 16.458447058045092 22.914288786329877 42.841132780838 17.786131374787026 48 17.4906538964154 23.572444709112865 39.20049459911005 19.736406795361685 49 16.38587001472218 23.00340760590872 40.920012240914424 19.690710138454666 50 17.052296825633135 22.0762410467636 40.859427985377074 20.01203414222619 51 17.26072320645791 21.800406927695896 39.70398491390005 21.23488495194614 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 47.0 1 343.0 2 639.0 3 25823.0 4 51007.0 5 35300.5 6 19594.0 7 18825.0 8 18056.0 9 17805.0 10 17554.0 11 17298.0 12 17042.0 13 16259.5 14 15477.0 15 14763.5 16 14050.0 17 13122.5 18 12195.0 19 11407.5 20 10620.0 21 9847.0 22 9074.0 23 8529.5 24 7985.0 25 7649.0 26 7296.5 27 7280.0 28 7299.5 29 7319.0 30 7767.5 31 8216.0 32 8819.0 33 9422.0 34 10166.0 35 10910.0 36 11711.0 37 12512.0 38 13083.0 39 13654.0 40 14324.5 41 14995.0 42 15850.0 43 16705.0 44 17734.0 45 18763.0 46 28639.5 47 38516.0 48 33093.0 49 27670.0 50 25668.5 51 23667.0 52 21107.5 53 18548.0 54 16607.0 55 14666.0 56 13179.5 57 11693.0 58 10488.0 59 9283.0 60 7856.5 61 6430.0 62 5544.0 63 4658.0 64 3764.5 65 2871.0 66 2359.5 67 1848.0 68 1505.0 69 1162.0 70 939.0 71 716.0 72 590.5 73 465.0 74 443.0 75 369.0 76 317.0 77 234.5 78 152.0 79 107.5 80 63.0 81 44.0 82 25.0 83 19.5 84 14.0 85 9.5 86 5.0 87 4.0 88 3.0 89 2.5 90 2.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 483624.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.09301559105234 #Duplication Level Percentage of deduplicated Percentage of total 1 83.12056483394528 49.11844833669406 2 8.474125557987994 10.015232674374392 3 3.51845369292843 6.237481167978462 4 1.9195533173203918 4.537287764330806 5 1.0681651841615196 3.156055094073799 6 0.6276386821376281 2.225343745746384 7 0.36459148954426596 1.5081367403203016 8 0.2226640753053455 1.0526313338868827 9 0.15106952763601103 0.8034438556734943 >10 0.45484311795310267 4.516512440874096 >50 0.04201364315023368 1.7404238010091637 >100 0.03204430405571385 3.704291756524944 >500 0.0021362869370475904 0.8350752005934058 >1k 0.0014241912913650603 2.1488090258655714 >5k 3.560478228412651E-4 1.1868629898078615 >10k+ 3.560478228412651E-4 7.213964072246437 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 34287 7.089598531090269 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCG 5641 1.1664019982465716 No Hit GAATCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTC 3963 0.8194382412783484 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGC 3776 0.780771839280102 No Hit GAACTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCT 1367 0.2826576017732784 No Hit GCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCTGC 1107 0.22889682894149174 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGGCGAAAAT 993 0.20532479777678525 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTC 753 0.15569946900898218 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 584 0.12075496666832085 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGGCGAAAATCGTA 574 0.11868724463632906 No Hit GAATGCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTT 543 0.11227730633715449 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCC 522 0.1079350900699717 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA 495 0.10235224058359386 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.06079102774055878 0.0 2 0.0 0.0 0.0 0.42264238333912296 0.0 3 0.0 0.0 0.0 0.5427770333978462 0.0 4 0.0 0.0 0.0 1.0466808925942468 0.0 5 0.0 0.0 0.0 2.2403768216631104 0.0 6 0.0 0.0 0.0 2.6795609812581676 0.0 7 0.0 0.0 0.0 3.06457082361504 0.0 8 0.0 0.0 0.0 3.536838535721966 0.0 9 0.0 0.0 0.0 3.7942699287049444 0.0 10 0.0 0.0 0.0 5.4881478173126235 0.0 11 0.0 0.0 0.0 5.905207351165368 0.0 12 0.0 0.0 0.0 7.133227465965295 0.0 13 0.0 0.0 0.0 7.3046416224174155 0.0 14 0.0 0.0 0.0 7.415471523332175 0.0 15 0.0 0.0 0.0 7.657601773278414 0.0 16 0.0 0.0 0.0 7.820951813805767 0.0 17 0.0 0.0 0.0 7.95866210113642 0.0 18 0.0 0.0 0.0 8.086654094916712 0.0 19 0.0 0.0 0.0 8.476212925743967 0.0 20 0.0 0.0 0.0 8.605859097149851 0.0 21 0.0 0.0 0.0 8.743776156683705 0.0 22 0.0 0.0 0.0 8.936901394471738 0.0 23 0.0 0.0 0.0 9.089706052635933 0.0 24 0.0 0.0 0.0 9.21356260235224 0.0 25 0.0 0.0 0.0 9.320463831406217 0.0 26 0.0 0.0 0.0 9.426331199444196 0.0 27 0.0 0.0 0.0 9.544811671877326 0.0 28 0.0 0.0 0.0 9.655228028385688 0.0 29 0.0 0.0 0.0 9.770400145567631 0.0 30 0.0 0.0 0.0 9.902734355615106 0.0 31 0.0 0.0 0.0 10.029278943973004 0.0 32 0.0 0.0 0.0 10.150860999454121 0.0 33 0.0 0.0 0.0 10.277612360015219 0.0 34 0.0 0.0 0.0 10.400435048715531 0.0 35 0.0 0.0 0.0 10.540626602484576 0.0 36 0.0 0.0 0.0 10.66779150745207 0.0 37 0.0 0.0 0.0 10.800332489702745 0.0 38 0.0 0.0 0.0 10.947967842786959 0.0 39 0.0 0.0 0.0 11.13654409210461 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTTTGCG 40 6.8012014E-9 45.0 1 ATCCGTC 35 1.2099736E-7 45.0 6 CACCCGT 35 1.2099736E-7 45.0 16 ACCGACT 30 2.162884E-6 44.999996 17 ATCCGGC 30 2.162884E-6 44.999996 6 GCGATCG 30 2.162884E-6 44.999996 9 CGTTTTT 20270 0.0 44.555992 1 TACGGCT 630 0.0 41.428574 7 ACCGGTG 60 3.6379788E-12 41.249996 17 ACGGCTG 635 0.0 41.102364 8 GATACCT 800 0.0 41.0625 5 CGACCAC 570 0.0 41.05263 12 CACGTGA 170 0.0 41.029415 43 TCGGGAA 110 0.0 40.909092 5 AGACACG 165 0.0 40.90909 24 CGTGAGG 160 0.0 40.78125 45 GAATGAT 2305 0.0 40.41215 1 CCGATGA 95 0.0 40.263157 18 GTTTTTT 22560 0.0 40.202793 2 CGGCTGT 605 0.0 40.16529 9 >>END_MODULE