##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933328.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 637128 Sequences flagged as poor quality 0 Sequence length 51 %GC 36 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.701130699011816 31.0 28.0 33.0 25.0 34.0 2 29.11779108750518 31.0 28.0 33.0 16.0 34.0 3 29.09264386434123 31.0 28.0 34.0 16.0 34.0 4 33.37750342160445 35.0 32.0 37.0 28.0 37.0 5 34.37636707223666 35.0 33.0 37.0 32.0 37.0 6 33.967537135395084 35.0 33.0 37.0 28.0 37.0 7 33.72734835072387 35.0 33.0 37.0 29.0 37.0 8 33.79901212943082 35.0 33.0 37.0 28.0 37.0 9 34.89976111550583 37.0 34.0 39.0 28.0 39.0 10 34.742034567622206 37.0 33.0 39.0 27.0 39.0 11 35.13780590399417 37.0 34.0 39.0 28.0 39.0 12 35.243659044964275 37.0 34.0 39.0 30.0 39.0 13 35.53762352305973 37.0 34.0 39.0 30.0 39.0 14 36.33481655177609 38.0 35.0 40.0 30.0 41.0 15 36.641748596828265 38.0 35.0 40.0 30.0 41.0 16 36.545264059969114 38.0 34.0 40.0 30.0 41.0 17 35.837917969387625 38.0 34.0 40.0 27.0 41.0 18 35.59751258773747 38.0 34.0 39.0 28.0 40.0 19 34.88056873971949 37.0 34.0 38.0 27.0 40.0 20 34.285754196958855 35.0 33.0 38.0 27.0 40.0 21 34.57885071759521 35.0 33.0 38.0 29.0 40.0 22 35.07438065820369 35.0 33.0 39.0 30.0 40.0 23 35.4236009090795 35.0 34.0 39.0 30.0 40.0 24 34.84301113747944 35.0 34.0 39.0 29.0 40.0 25 33.77210544819879 35.0 33.0 38.0 24.0 40.0 26 33.83715517133135 35.0 33.0 38.0 25.0 40.0 27 34.62300197134642 35.0 33.0 39.0 27.0 40.0 28 34.428780402054215 35.0 33.0 39.0 25.0 40.0 29 34.385928730176666 35.0 33.0 39.0 25.0 40.0 30 33.57399768963222 35.0 33.0 39.0 22.0 40.0 31 33.504710199520346 35.0 33.0 39.0 22.0 40.0 32 32.88571370274105 35.0 33.0 39.0 18.0 40.0 33 32.04714908150324 35.0 31.0 39.0 12.0 40.0 34 31.476868070466217 35.0 30.0 40.0 9.0 41.0 35 31.082810675405884 36.0 27.0 40.0 8.0 41.0 36 30.414010999359625 35.0 23.0 40.0 7.0 41.0 37 30.391842769427807 36.0 23.0 40.0 7.0 41.0 38 29.96038472645999 35.0 22.0 39.0 7.0 41.0 39 29.708104180007783 35.0 21.0 39.0 7.0 40.0 40 29.50711473989528 35.0 21.0 39.0 7.0 40.0 41 29.25615731846662 35.0 20.0 39.0 7.0 40.0 42 29.409795205986867 35.0 20.0 39.0 7.0 40.0 43 29.293496754184403 35.0 19.0 39.0 7.0 40.0 44 29.323981994198967 35.0 18.0 39.0 7.0 40.0 45 29.433529840157707 35.0 20.0 39.0 7.0 40.0 46 29.21683868861516 35.0 20.0 39.0 7.0 40.0 47 29.11222234778569 35.0 20.0 39.0 7.0 40.0 48 28.929750379829485 35.0 20.0 39.0 7.0 40.0 49 29.114761868886628 35.0 20.0 39.0 7.0 40.0 50 29.109623184038373 35.0 20.0 39.0 7.0 40.0 51 28.092472784118733 34.0 18.0 38.0 7.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 1.0 7 1.0 8 7.0 9 17.0 10 18.0 11 21.0 12 36.0 13 46.0 14 93.0 15 137.0 16 272.0 17 616.0 18 1285.0 19 2246.0 20 3657.0 21 5565.0 22 8178.0 23 12208.0 24 17799.0 25 26168.0 26 33285.0 27 33992.0 28 29703.0 29 26223.0 30 25822.0 31 27656.0 32 32248.0 33 38875.0 34 45953.0 35 56386.0 36 65421.0 37 73080.0 38 60415.0 39 9698.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.29123818133876 2.4745420072575683 34.594775304177496 39.63944450722618 2 39.02418352356199 13.806487864291006 33.49107243756357 13.678256174583442 3 11.19916249168142 14.016178852601048 60.46210494594493 14.322553709772604 4 10.323514270287918 2.5826835423965044 71.07975163546415 16.014050551851433 5 18.67866425584812 3.077874461646639 61.54917065330672 16.694290629198527 6 13.350849436847856 11.852249469494355 64.19824587837923 10.598655215278562 7 53.99087781419119 0.8688991850931053 42.89499127333911 2.2452317273766025 8 53.79327230948883 8.186737986715386 35.494594492786376 2.5253952110094047 9 50.832956642935166 2.4389133737647692 34.542038648434854 12.186091334865209 10 28.27626473801183 18.292870506397456 41.4513253223842 11.979539433206513 11 19.765416054544772 16.547852236913148 49.75185520021095 13.934876508331136 12 15.296769252018432 15.233202747328637 52.57624841476124 16.89377958589169 13 15.131339385492398 15.632023706382391 57.334162052209294 11.902474855915923 14 14.526280433445086 20.243498951545057 49.90096181614997 15.329258798859884 15 11.999943496440276 16.615656508582262 57.26855514119612 14.115844853781342 16 13.482220213206766 18.14925729209829 49.30736053038008 19.061161964314863 17 14.103445461508521 17.758284049672906 52.755804171218344 15.382466317600233 18 14.119611757762963 17.739135621099685 51.5635790610364 16.57767356010095 19 13.999384739016335 19.372245451463442 48.99423663690812 17.634133172612096 20 16.017974410165618 18.46143945957484 53.22274331060635 12.297842819653193 21 16.291859720495726 21.55689280646903 49.683737019876695 12.46751045315855 22 14.904697329265076 15.42044926608154 51.68710212076694 17.987751283886443 23 14.710230911214072 20.791583480870408 50.97311686191786 13.525068745997665 24 15.968062932409186 17.6134152007132 49.1252935046019 17.293228362275713 25 13.534172097286573 24.25179869665122 47.52938185105662 14.684647355005588 26 14.140800592659561 17.80081867379867 50.791206790472245 17.267173943069526 27 16.878555015632653 19.0118783038887 47.42390853957132 16.68565814090732 28 12.68567697542723 19.84781707914265 51.31794553056842 16.14856041486169 29 17.045868334149496 19.298319960824198 47.77752665084567 15.878285054180635 30 16.68801245589583 21.082262904785225 48.82990545071006 13.399819188608882 31 17.26984216672317 20.723151391871024 45.14116472671111 16.865841714694692 32 20.113383809846688 21.38863776195678 44.50141886716641 13.996559561030123 33 16.430607350485303 19.47614921962306 44.70577340816916 19.387470021722482 34 20.32354566115443 23.746876608781907 40.63202370638239 15.29755402368127 35 18.583549930312277 21.842235783076553 39.54276063836466 20.031453648246504 36 16.812477241621778 26.30397659496993 39.924159666503435 16.95938649690486 37 21.405431875541492 23.277426200072824 39.34531208799488 15.971829836390805 38 17.77429339159478 25.318146432114112 39.006604638314435 17.90095553797667 39 23.916073379289564 23.410994337087683 36.39033286874851 16.282599414874248 40 18.444331437324994 23.45572632186939 39.253807712108085 18.84613452869753 41 19.89192124659409 25.624207380620533 37.79005160658455 16.693819766200825 42 17.927323865847995 24.046188520987933 38.970505141823935 19.055982471340137 43 19.782681031127183 23.525884908527015 37.64832184427619 19.043112216069613 44 20.80994713778079 23.72270564156653 35.631301716452576 19.836045504200097 45 17.52065519016587 23.96253186172951 36.177188885121986 22.339624062982637 46 22.029168393164326 24.92591755502819 34.72677389786668 18.31814015394081 47 16.872904659660225 22.970894388568702 41.94337715498298 18.212823796788086 48 20.03600532389096 24.72501600934192 34.32387212616617 20.91510654060095 49 17.572764028578245 22.876093971697994 39.06624728469005 20.484894715033715 50 18.63079318441506 22.234621614495044 38.290108110144274 20.844477090945617 51 18.702992177396066 22.816922188320085 35.43887570472496 23.041209929558896 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 41.0 1 812.5 2 1584.0 3 20813.0 4 40042.0 5 30526.5 6 21011.0 7 20148.0 8 19285.0 9 18958.5 10 18632.0 11 17857.5 12 17083.0 13 16320.5 14 15558.0 15 14637.0 16 13716.0 17 12741.0 18 11766.0 19 10987.5 20 10209.0 21 9548.5 22 8888.0 23 8610.0 24 8332.0 25 8239.0 26 8333.0 27 8520.0 28 9033.5 29 9547.0 30 10598.5 31 11650.0 32 12632.5 33 13615.0 34 14811.5 35 16008.0 36 17716.0 37 19424.0 38 20118.5 39 20813.0 40 21549.5 41 22286.0 42 23481.5 43 24677.0 44 26484.5 45 28292.0 46 56261.5 47 84231.0 48 61017.0 49 37803.0 50 34760.5 51 31718.0 52 28235.0 53 24752.0 54 23193.0 55 21634.0 56 19870.0 57 18106.0 58 16363.5 59 14621.0 60 13001.0 61 11381.0 62 9891.0 63 8401.0 64 6937.0 65 5473.0 66 4549.0 67 3625.0 68 2990.5 69 2356.0 70 1915.5 71 1475.0 72 1233.0 73 991.0 74 833.5 75 535.0 76 394.0 77 290.5 78 187.0 79 151.5 80 116.0 81 75.5 82 35.0 83 24.5 84 14.0 85 9.5 86 5.0 87 5.5 88 6.0 89 4.0 90 2.0 91 1.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 637128.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.45380150228122 #Duplication Level Percentage of deduplicated Percentage of total 1 80.16662500092136 41.24877609905223 2 7.432711344964795 7.648825083351444 3 3.9994468864078065 6.173602386364319 4 2.599578026197773 5.3503268699868896 5 1.735233935668502 4.464219124295467 6 1.199307370738079 3.702535403650795 7 0.8321087722622473 2.997061171740203 8 0.5692376802253459 2.3431554084747184 9 0.38531212412886406 1.7843196196214026 >10 1.0026046996138533 7.616142202173802 >50 0.04787418856931947 1.6998420545252177 >100 0.024709253857393407 2.3929055745226893 >500 0.001853194039304384 0.5907172757189689 >1k 0.002162059712521781 2.6379650416085996 >5k 0.0 0.0 >10k+ 0.0012354626928695893 9.34960668491328 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 18985 2.9797780037920165 No Hit GAATCTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGCCGTCTTC 15036 2.3599653444833693 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGCCG 13917 2.184333446340453 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGC 10893 1.7097035446566469 No Hit GAACTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGCCGTCTTCT 3415 0.535999045717658 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGCCGTC 2611 0.4098077623334715 No Hit GCTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGCCGTCTTCTGC 2541 0.3988209590537537 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAGAGTGCTT 2407 0.3777890784897226 No Hit GAATGACTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGCCGTCT 2235 0.3507929332881305 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTA 1906 0.29915495787345714 No Hit GAATGCTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGCCGTCTT 1484 0.23292022953001595 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCAGAGTGCTTCGT 961 0.15083311359726775 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04426112178400573 0.0 2 0.0 0.0 0.0 0.5124558958325486 0.0 3 0.0 0.0 0.0 0.6058437237101493 0.0 4 0.0 0.0 0.0 1.2663075551537524 0.0 5 0.0 0.0 0.0 4.084893459399053 0.0 6 0.0 0.0 0.0 4.448870556622845 0.0 7 0.0 0.0 0.0 4.9388819828982555 0.0 8 0.0 0.0 0.0 5.505173214801421 0.0 9 0.0 0.0 0.0 5.618651197247649 0.0 10 0.0 0.0 0.0 8.325956479702665 0.0 11 0.0 0.0 0.0 8.487619442247084 0.0 12 0.0 0.0 0.0 10.639620296078652 0.0 13 0.0 0.0 0.0 10.797673308974021 0.0 14 0.0 0.0 0.0 10.925591090016448 0.0 15 0.0 0.0 0.0 11.333201491693977 0.0 16 0.0 0.0 0.0 11.569574716540476 0.0 17 0.0 0.0 0.0 11.693411684936152 0.0 18 0.0 0.0 0.0 11.790252508130234 0.0 19 0.0 0.0 0.0 12.357485466028804 0.0 20 0.0 0.0 0.0 12.48430456674326 0.0 21 0.0 0.0 0.0 12.594957371203275 0.0 22 0.0 0.0 0.0 12.783145615951582 0.0 23 0.0 0.0 0.0 12.898664004721187 0.0 24 0.0 0.0 0.0 13.001469092552831 0.0 25 0.0 0.0 0.0 13.084968797478686 0.0 26 0.0 0.0 0.0 13.179769214349394 0.0 27 0.0 0.0 0.0 13.317575118343568 0.0 28 0.0 0.0 0.0 13.41504375886792 0.0 29 0.0 0.0 0.0 13.520203161688075 0.0 30 0.0 0.0 0.0 13.635407641792543 0.0 31 0.0 0.0 0.0 13.74904257857134 0.0 32 0.0 0.0 0.0 13.874135181627553 0.0 33 0.0 0.0 0.0 13.98824098140405 0.0 34 0.0 0.0 0.0 14.133109830363757 0.0 35 0.0 0.0 0.0 14.261812383069023 0.0 36 0.0 0.0 0.0 14.39396793109077 0.0 37 0.0 0.0 0.0 14.52894865709873 0.0 38 0.0 0.0 0.0 14.676956592709786 0.0 39 0.0 0.0 0.0 14.846624226215141 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACCGGTC 35 1.2107921E-7 45.000004 17 ACCCGGC 20 7.030918E-4 45.0 39 ATACGCC 20 7.030918E-4 45.0 6 CGTTAGG 25 3.8888425E-5 44.999996 2 GTTACGG 25 3.8888425E-5 44.999996 2 CGTTTTT 17740 0.0 44.429256 1 GATACCT 1625 0.0 43.338463 5 TGATACC 1640 0.0 42.80488 4 ACGGCTG 1465 0.0 42.696243 8 TACGGCT 1475 0.0 42.559322 7 CGGCTGT 1520 0.0 41.44737 9 CCGATGA 450 0.0 41.0 18 ATGATAC 5125 0.0 40.785366 3 AATCTGT 1925 0.0 40.675327 2 ATACCTG 1760 0.0 40.52557 6 GCGACTG 245 0.0 40.408165 11 GAATGAT 5300 0.0 40.33019 1 GAATCTG 1940 0.0 40.244843 1 AATGATA 5115 0.0 40.117302 2 ATACGGC 3445 0.0 40.036285 6 >>END_MODULE