##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933327.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 428309 Sequences flagged as poor quality 0 Sequence length 51 %GC 35 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.956414644567356 31.0 28.0 31.0 19.0 33.0 2 29.347300663773115 31.0 30.0 33.0 16.0 34.0 3 29.498618987693465 31.0 30.0 33.0 16.0 34.0 4 32.439906702871056 35.0 32.0 37.0 19.0 37.0 5 33.78168098265505 35.0 33.0 37.0 30.0 37.0 6 33.19291679605145 35.0 33.0 37.0 26.0 37.0 7 32.11000235811061 35.0 31.0 35.0 25.0 37.0 8 33.28626062025314 35.0 33.0 36.0 28.0 37.0 9 33.02387528630031 35.0 31.0 37.0 25.0 39.0 10 31.522305158191866 35.0 27.0 39.0 15.0 39.0 11 32.651471250895966 35.0 30.0 39.0 17.0 39.0 12 33.36928012252836 35.0 31.0 39.0 25.0 39.0 13 33.70315356436591 35.0 32.0 39.0 25.0 39.0 14 33.776834014695 37.0 32.0 40.0 21.0 41.0 15 34.432377092239484 37.0 32.0 40.0 25.0 41.0 16 34.61441856229965 37.0 32.0 40.0 25.0 41.0 17 32.59514742860878 36.0 29.0 39.0 18.0 41.0 18 33.28945457601871 36.0 31.0 39.0 23.0 39.0 19 33.1001730059373 36.0 31.0 37.0 23.0 39.0 20 32.78894443030616 35.0 31.0 37.0 25.0 39.0 21 33.0360510752751 35.0 32.0 37.0 25.0 39.0 22 33.2351479889519 35.0 31.0 38.0 26.0 39.0 23 34.3058259340803 35.0 33.0 38.0 27.0 40.0 24 32.443060967665865 35.0 31.0 37.0 22.0 39.0 25 31.496260877077063 35.0 30.0 37.0 18.0 39.0 26 30.82292690557518 33.0 25.0 37.0 20.0 39.0 27 32.62758662554371 35.0 31.0 38.0 22.0 39.0 28 32.701750371811 35.0 31.0 38.0 22.0 39.0 29 32.88283692380968 35.0 31.0 38.0 22.0 40.0 30 31.69638975599392 35.0 30.0 38.0 18.0 40.0 31 32.10817423869216 35.0 30.0 38.0 21.0 40.0 32 31.95764506466126 35.0 30.0 38.0 18.0 40.0 33 31.795719912493084 35.0 30.0 38.0 15.0 40.0 34 30.797055396921383 35.0 29.0 38.0 10.0 40.0 35 30.232859921225096 35.0 26.0 38.0 8.0 40.0 36 29.543381063671323 35.0 24.0 38.0 7.0 40.0 37 29.692544401355097 35.0 24.0 38.0 7.0 40.0 38 29.481021879063945 35.0 23.0 38.0 7.0 40.0 39 29.19907590080993 34.0 23.0 38.0 7.0 40.0 40 28.99791038712705 34.0 22.0 38.0 7.0 40.0 41 28.735160830148327 34.0 21.0 38.0 7.0 40.0 42 29.125598574860675 35.0 22.0 38.0 7.0 40.0 43 29.09640002895106 35.0 21.0 38.0 7.0 40.0 44 29.015320714717646 35.0 21.0 38.0 7.0 40.0 45 29.22046466452958 35.0 22.0 38.0 7.0 40.0 46 28.989467884167738 35.0 20.0 38.0 7.0 40.0 47 29.0301371206302 35.0 20.0 38.0 7.0 40.0 48 28.722464389027547 34.0 20.0 38.0 7.0 40.0 49 28.450905771300626 34.0 20.0 38.0 7.0 40.0 50 28.65654235610272 34.0 20.0 38.0 7.0 40.0 51 27.288315211681287 33.0 19.0 37.0 7.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 8.0 10 20.0 11 13.0 12 25.0 13 36.0 14 102.0 15 180.0 16 407.0 17 733.0 18 1272.0 19 2140.0 20 3397.0 21 4973.0 22 6887.0 23 9666.0 24 13651.0 25 18445.0 26 23020.0 27 23778.0 28 22058.0 29 22333.0 30 24310.0 31 27819.0 32 32323.0 33 38166.0 34 43436.0 35 47637.0 36 36617.0 37 20379.0 38 4394.0 39 83.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 18.88683170327964 2.429087411191453 38.08161864448331 40.6024622410456 2 40.99049984940778 8.87583496961306 36.446350648713896 13.687314532265257 3 12.094072270253484 8.935371425769713 64.45159919590763 14.518957108069175 4 11.269900936006481 2.655092468288082 69.47904433481436 16.59596226089109 5 16.253686007064992 3.1362871198130327 64.23656752484771 16.37345934827426 6 14.08165600069109 8.247316773637724 65.87370333100635 11.797323894664833 7 55.66635303017215 0.9212974744868775 40.9090166211777 2.5033328741632794 8 57.744992517084626 5.417350557658139 34.39736265173041 2.4402942735268227 9 53.926020700008635 2.3884625352257367 34.263814208900584 9.421702555865041 10 28.097471685161878 19.596132698589102 40.51420820015456 11.792187416094455 11 18.63094167995536 17.162142285125924 50.542248703622846 13.664667331295863 12 15.542283725067648 15.935457812000214 52.675054691822965 15.847203771109175 13 14.922637628441148 16.17570492331471 56.35464115860278 12.547016289641357 14 14.372800945112058 17.84389307719427 51.67717699137771 16.106128986315955 15 12.410899607526343 16.87590034297668 56.119764002157325 14.593436047339653 16 13.882734194238273 16.806324405977925 50.750509562021804 18.56043183776199 17 14.503314196059385 16.828504654350013 52.71171047071157 15.956470678879034 18 14.376069613293208 16.864926956939964 52.0446686854584 16.71433474430843 19 14.541137356441261 18.91648319320864 49.74399323852639 16.798386211823708 20 16.19228174051911 18.115659488826992 52.55551482691234 13.136543943741552 21 16.572614631025733 20.10417712445921 49.60367398303561 13.719534261479446 22 15.500491467608665 16.411282508656132 51.15302270090052 16.93520332283468 23 14.938747493048243 20.317340985129896 50.175924391035444 14.56798713078642 24 15.119691624504739 17.573060570756162 50.15677933454585 17.150468470193246 25 14.145861982820815 20.895895253193373 48.534119058903734 16.424123705082078 26 14.455918507432719 18.8543784977668 50.4430212766951 16.246681718105386 27 15.263746500773973 19.177276218804646 48.793744703006475 16.765232577414903 28 13.229234034307009 19.53402800314726 51.334667261252974 15.90207070129276 29 16.470818964812786 18.50369709718918 48.975155787060274 16.050328150937755 30 15.886894741880278 20.053979720248698 49.522657707402836 14.536467830468188 31 16.69308840113096 20.05117800466486 46.872001288789164 16.383732305415016 32 18.14671183654791 20.899630873971827 46.24908652398152 14.70457076549874 33 16.162863726888766 19.772874256669834 45.781666974077126 18.282595042364274 34 18.44112544915003 23.182795598504818 42.62156527180143 15.754513680543718 35 17.961798608014306 22.33597706328842 41.05517278413482 18.647051544562455 36 17.07879124650661 24.791680772526377 40.703090525765276 17.426437455201736 37 20.278583919553405 23.460165441305225 40.15161950834561 16.10963113079576 38 17.65874637236201 24.098022689226703 41.17144398086428 17.071786957547005 39 21.68084256926658 23.084735553070328 38.70173169370712 16.532690183955975 40 18.50323014459187 22.925504717388616 40.13691050153044 18.43435463648908 41 18.717094434158515 24.091018400267096 40.242208312223184 16.9496788533512 42 17.73182445384057 23.600484696796002 40.337933594671135 18.32975725469229 43 18.635144253331124 23.177892596233093 39.828721787307764 18.358241363128023 44 20.105811458549784 23.372378353011495 37.75241706338181 18.76939312505691 45 17.504885491549324 23.805710363312468 38.11127013441231 20.5781340107259 46 19.883075069634305 24.42208779175782 36.9800774674359 18.714759671171983 47 17.144164610129604 22.876007742074066 41.45184901554719 18.527978632249148 48 19.561111253791072 23.640175667567107 36.76527927267463 20.03343380596719 49 17.513991067196812 22.673817267440096 39.256471379307925 20.555720286055163 50 17.873311090824615 22.073316227303184 39.52893821983661 20.524434462035586 51 18.413808722207563 22.27457279674254 37.762456544223916 21.549161936825982 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 57.0 1 353.5 2 650.0 3 18563.5 4 36477.0 5 25323.0 6 14169.0 7 13527.5 8 12886.0 9 12573.0 10 12260.0 11 11627.5 12 10995.0 13 10392.5 14 9790.0 15 9184.5 16 8579.0 17 7850.0 18 7121.0 19 6659.5 20 6198.0 21 5723.5 22 5249.0 23 5102.0 24 4955.0 25 4789.5 26 4892.5 27 5161.0 28 5599.5 29 6038.0 30 6828.5 31 7619.0 32 8359.5 33 9100.0 34 9842.5 35 10585.0 36 11818.0 37 13051.0 38 13709.0 39 14367.0 40 15020.0 41 15673.0 42 16484.0 43 17295.0 44 18623.5 45 19952.0 46 29955.5 47 39959.0 48 34099.5 49 28240.0 50 26065.0 51 23890.0 52 21241.5 53 18593.0 54 16940.0 55 15287.0 56 14046.0 57 12805.0 58 11390.5 59 9976.0 60 9025.5 61 8075.0 62 7058.5 63 6042.0 64 5110.0 65 4178.0 66 3577.5 67 2977.0 68 2472.5 69 1968.0 70 1632.5 71 1297.0 72 1088.0 73 879.0 74 733.0 75 464.0 76 341.0 77 266.0 78 191.0 79 146.0 80 101.0 81 66.5 82 32.0 83 25.0 84 18.0 85 13.0 86 8.0 87 9.0 88 10.0 89 6.0 90 2.0 91 1.5 92 1.0 93 0.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 428309.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.88350354533278 #Duplication Level Percentage of deduplicated Percentage of total 1 79.51108248935694 42.04824612719155 2 8.40793987711225 8.892826366004211 3 4.073995149087233 6.4634141073126985 4 2.515325370636027 5.320768726227834 5 1.6114180654944559 4.260871648979467 6 1.066728253711956 3.3847396432249726 7 0.7748705400041508 2.8684508264638406 8 0.5456941329512034 2.3086574091673815 9 0.3912202680812054 1.8620188590670619 >10 1.032873258070793 7.9632263584152705 >50 0.036901391049034366 1.3903068342425038 >100 0.027001017840604862 2.775853973731173 >500 0.0018000678560403242 0.5652137506525666 >1k 0.002250084820050405 2.6806600788844253 >5k 4.5001696401008104E-4 1.4543247285211935 >10k+ 4.5001696401008104E-4 5.7604205619138416 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 24205 5.651293808908989 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGCCG 6111 1.4267736610717963 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGC 4082 0.9530502511037592 No Hit GAATCTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGCCGTCTTC 3931 0.9177953300070744 No Hit GAACTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGCCGTCTTCT 1167 0.27246684052868375 No Hit GCTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGCCGTCTTCTGC 1045 0.2439827320929516 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAGAGTGCTT 1039 0.24258187430103031 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGCCGTC 779 0.18187803665110938 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTA 574 0.1340153954271332 No Hit GAATGATACCTGTCTCTTCTACACATCTGACGCAGAGTGCTTCGTATGCCG 517 0.12070724640388131 No Hit GAATGACTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGCCGTCT 505 0.1179055308200388 No Hit GAATCTTTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGCCGTCTTC 474 0.110667765561779 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGCC 456 0.10646519218601525 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 443 0.10343000030351918 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.3347629865354218E-4 0.0 0.0 0.060470361351267425 0.0 2 2.3347629865354218E-4 0.0 0.0 0.4214247190696436 0.0 3 2.3347629865354218E-4 0.0 0.0 0.5701491213119501 0.0 4 2.3347629865354218E-4 0.0 0.0 1.0641849692628453 0.0 5 2.3347629865354218E-4 0.0 0.0 2.3436350858842565 0.0 6 2.3347629865354218E-4 0.0 0.0 2.7690289020310104 0.0 7 2.3347629865354218E-4 0.0 0.0 3.169907706819142 0.0 8 2.3347629865354218E-4 0.0 0.0 3.635225970035652 0.0 9 2.3347629865354218E-4 0.0 0.0 3.851891975186139 0.0 10 2.3347629865354218E-4 0.0 0.0 5.894342635807326 0.0 11 2.3347629865354218E-4 0.0 0.0 6.376938145124198 0.0 12 2.3347629865354218E-4 0.0 0.0 7.823790767880198 0.0 13 2.3347629865354218E-4 0.0 0.0 8.02621471881282 0.0 14 2.3347629865354218E-4 0.0 0.0 8.164432687615717 0.0 15 2.3347629865354218E-4 0.0 0.0 8.453476345348802 0.0 16 2.3347629865354218E-4 0.0 0.0 8.645627339140667 0.0 17 2.3347629865354218E-4 0.0 0.0 8.844082192996177 0.0 18 2.3347629865354218E-4 0.0 0.0 9.031096708217666 0.0 19 2.3347629865354218E-4 0.0 0.0 9.48684244318938 0.0 20 2.3347629865354218E-4 0.0 0.0 9.670354813931064 0.0 21 2.3347629865354218E-4 0.0 0.0 9.871377907071764 0.0 22 2.3347629865354218E-4 0.0 0.0 10.13940869792603 0.0 23 2.3347629865354218E-4 0.0 0.0 10.371717615086304 0.0 24 2.3347629865354218E-4 0.0 0.0 10.567604229656627 0.0 25 2.3347629865354218E-4 0.0 0.0 10.724967254949114 0.0 26 2.3347629865354218E-4 0.0 0.0 10.889101092902553 0.0 27 2.3347629865354218E-4 0.0 0.0 11.043895878909852 0.0 28 4.6695259730708435E-4 0.0 0.0 11.202426285695607 0.0 29 4.6695259730708435E-4 0.0 0.0 11.360956692481363 0.0 30 4.6695259730708435E-4 0.0 0.0 11.53606391647152 0.0 31 4.6695259730708435E-4 0.0 0.0 11.702532517411495 0.0 32 4.6695259730708435E-4 0.0 0.0 11.876705836207037 0.0 33 4.6695259730708435E-4 0.0 0.0 12.056482586170265 0.0 34 4.6695259730708435E-4 0.0 0.0 12.228554618277926 0.0 35 4.6695259730708435E-4 0.0 0.0 12.421872993563058 0.0 36 4.6695259730708435E-4 0.0 0.0 12.595112407163986 0.0 37 4.6695259730708435E-4 0.0 0.0 12.783994732774703 0.0 38 4.6695259730708435E-4 0.0 0.0 12.988053017797899 0.0 39 4.6695259730708435E-4 0.0 0.0 13.186974824250717 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTGTCG 20 7.0283253E-4 45.0 1 ACCGGTG 35 1.209537E-7 45.0 17 TCAAGCG 45 3.8380676E-10 45.0 17 CACCGCT 30 2.1623018E-6 44.999996 16 CGTTTTT 12785 0.0 44.56003 1 TACGGCT 525 0.0 42.428574 7 ACGGCTG 535 0.0 41.635517 8 AATGATC 200 0.0 41.625 2 CACCGGT 55 6.002665E-11 40.909092 16 GAATCTG 575 0.0 40.695652 1 ATACGGC 1175 0.0 40.595745 6 ATGATAC 2035 0.0 40.577393 3 GCGAGAC 50 1.0786607E-9 40.5 21 ACACGAC 50 1.0786607E-9 40.5 26 CACGACC 50 1.0786607E-9 40.5 27 ACGACCA 50 1.0786607E-9 40.5 28 TGCGTTG 50 1.0786607E-9 40.5 1 GTTTTTT 14245 0.0 40.293083 2 CGATGAA 95 0.0 40.263157 19 GAATGAT 2200 0.0 40.090908 1 >>END_MODULE