##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933324.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 706400 Sequences flagged as poor quality 0 Sequence length 51 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.576138165345412 31.0 28.0 33.0 25.0 34.0 2 28.990131653454135 31.0 28.0 33.0 16.0 34.0 3 29.005864949037374 31.0 28.0 34.0 16.0 34.0 4 33.24007361268403 35.0 32.0 37.0 28.0 37.0 5 34.2596050396376 35.0 33.0 37.0 30.0 37.0 6 33.790668176670444 35.0 33.0 37.0 28.0 37.0 7 33.502814269535676 35.0 32.0 37.0 28.0 37.0 8 33.65438561721405 35.0 33.0 37.0 28.0 37.0 9 34.68472253680634 37.0 34.0 39.0 28.0 39.0 10 34.443745753114385 37.0 32.0 39.0 27.0 39.0 11 34.715709229898074 37.0 34.0 39.0 27.0 39.0 12 34.86011325028313 37.0 34.0 39.0 27.0 39.0 13 35.14609711211778 37.0 34.0 39.0 29.0 39.0 14 35.87987117780295 38.0 34.0 40.0 27.0 41.0 15 36.24893544733862 38.0 34.0 40.0 30.0 41.0 16 36.04445356738392 38.0 34.0 40.0 29.0 41.0 17 35.43397791619479 37.0 33.0 40.0 27.0 41.0 18 35.15197904869762 37.0 33.0 39.0 27.0 40.0 19 34.45843006795017 37.0 33.0 38.0 27.0 40.0 20 34.18598952434881 35.0 33.0 38.0 27.0 40.0 21 34.42607446206115 35.0 33.0 38.0 27.0 40.0 22 34.99485843714609 35.0 33.0 39.0 30.0 40.0 23 35.37730464326161 36.0 34.0 39.0 30.0 40.0 24 34.810423272933186 35.0 33.0 39.0 28.0 40.0 25 33.68793742921857 35.0 33.0 39.0 24.0 40.0 26 33.823999150622875 35.0 33.0 38.0 25.0 40.0 27 34.51846687429219 35.0 33.0 39.0 27.0 40.0 28 34.361838901472254 35.0 33.0 39.0 25.0 40.0 29 34.43678369195923 35.0 33.0 39.0 25.0 40.0 30 33.6494238391846 35.0 33.0 39.0 22.0 40.0 31 33.455251981879954 35.0 33.0 39.0 22.0 40.0 32 33.031186296715745 35.0 32.0 39.0 19.0 40.0 33 32.70225226500566 36.0 32.0 39.0 15.0 40.0 34 32.22762457531144 36.0 31.0 40.0 12.0 41.0 35 31.827614665911664 36.0 30.0 40.0 10.0 41.0 36 31.187120611551528 35.0 29.0 40.0 8.0 41.0 37 31.12885758776897 36.0 28.0 40.0 8.0 41.0 38 30.73073046432616 35.0 26.0 39.0 8.0 41.0 39 30.487357021517553 35.0 25.0 39.0 7.0 40.0 40 30.37400906002265 35.0 24.0 39.0 7.0 40.0 41 29.941940826727066 35.0 23.0 39.0 7.0 40.0 42 30.092477349943376 35.0 23.0 39.0 7.0 40.0 43 29.95922140430351 35.0 23.0 39.0 7.0 40.0 44 30.037246602491507 35.0 23.0 39.0 7.0 40.0 45 30.048311155152888 35.0 23.0 39.0 7.0 40.0 46 29.858195073612684 35.0 23.0 39.0 7.0 40.0 47 29.785904586636466 35.0 23.0 39.0 7.0 40.0 48 29.682961494903736 35.0 23.0 38.0 7.0 40.0 49 29.84800537938845 35.0 24.0 39.0 7.0 40.0 50 29.819031710079276 35.0 24.0 39.0 7.0 40.0 51 28.609518686296717 34.0 22.0 38.0 7.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 10.0 9 41.0 10 37.0 11 42.0 12 55.0 13 74.0 14 105.0 15 191.0 16 369.0 17 753.0 18 1391.0 19 2312.0 20 3871.0 21 5696.0 22 8308.0 23 11734.0 24 17068.0 25 24490.0 26 32119.0 27 34326.0 28 32445.0 29 30133.0 30 30740.0 31 34199.0 32 40112.0 33 48124.0 34 56095.0 35 66467.0 36 75066.0 37 78893.0 38 61827.0 39 9304.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.027463193657983 2.5669592298980746 35.08437146092865 37.32120611551529 2 36.25821064552661 13.117638731596829 35.59668742921857 15.027463193657983 3 13.759767836919593 13.35617214043035 57.99745186862967 14.886608154020383 4 12.022366930917327 3.07063986409966 66.87330124575311 18.0336919592299 5 19.495753114382786 4.022508493771235 58.23938278595696 18.242355605889017 6 14.781710079275198 12.403737259343147 60.9661664779162 11.84838618346546 7 57.39864099660249 1.4303510758776898 38.247451868629675 2.9235560588901475 8 57.07601925254813 8.326160815402037 31.654303510758773 2.9435164212910534 9 53.80124575311438 2.9963193657984144 31.12655719139298 12.075877689694224 10 31.454699886749715 18.661240090600227 36.90430351075878 12.97975651189128 11 23.737825594563986 17.319790486976217 44.308040770101925 14.63434314835787 12 17.77080973952435 16.10022650056625 48.20413363533409 17.924830124575312 13 17.35135900339751 16.54402604756512 52.59442242355606 13.510192525481312 14 16.07417893544734 20.492921857304644 46.65557757644394 16.777321630804074 15 13.875424688561722 15.923980747451868 53.92766138165346 16.272933182332956 16 16.300679501698752 17.70554926387316 45.64396942242356 20.349801812004532 17 16.246885617214044 17.740232163080407 48.70427519818799 17.308607021517552 18 16.619762174405437 17.128539071347678 47.72734994337486 18.524348810872027 19 16.518969422423556 18.863958097395244 45.191959229898075 19.425113250283125 20 19.03114382785957 18.934456398640997 48.79133635334088 13.243063420158553 21 19.167185730464325 21.83989241223103 44.94167610419026 14.051245753114383 22 17.766421291053227 15.850934314835788 47.544592298980746 18.838052095130237 23 17.19011891279728 21.346121177802946 46.65048131370328 14.813278595696488 24 17.625283125707814 18.444648924122312 45.685022650056624 18.24504530011325 25 15.896092865232164 24.38151189127973 43.128255945639864 16.594139297848244 26 16.60574745186863 17.55874858437146 46.406143827859566 19.42936013590034 27 18.330690826727068 18.884909399773502 44.45498301245753 18.3294167610419 28 15.120045300113249 19.30634201585504 47.619337485843715 17.954275198187997 29 20.42185730464326 17.81384484711212 43.84399773499434 17.920300113250285 30 18.80436013590034 20.053652321630803 45.77109286523216 15.370894677236693 31 19.009909399773502 18.240798414496037 44.359286523216305 18.390005662514156 32 20.45314269535674 23.048272933182332 41.0099093997735 15.48867497168743 33 20.08097395243488 19.352349943374858 38.86183465458664 21.704841449603624 34 20.891987542468858 21.251557191392976 39.74108154020385 18.115373725934315 35 20.049688561721403 23.03850509626274 39.01472253680634 17.897083805209512 36 20.8888731596829 25.115798414496037 36.60050962627406 17.394818799547 37 20.656002265005664 25.579133635334088 36.311438278595695 17.453425821064553 38 21.744337485843715 24.02477349943375 35.552095130237824 18.678793884484712 39 20.891138165345414 25.345554926387315 33.32686862967157 20.4364382785957 40 22.714184597961495 22.79742355605889 37.17780294450736 17.310588901472254 41 18.985560588901475 26.912938844847112 33.45144394110985 20.650056625141563 42 19.346545866364668 23.456257078142695 38.518120045300115 18.679077010192525 43 21.766987542468858 24.26174971687429 33.09258210645527 20.878680634201586 44 21.89864099660249 23.018686296715742 33.88250283125708 21.200169875424688 45 19.61169309173273 22.23272933182333 34.8728765571914 23.282701019252546 46 22.31823329558324 25.042893544733865 33.11452434881087 19.524348810872027 47 18.25552095130238 22.682049830124576 39.883069082672705 19.17936013590034 48 19.612400906002264 24.486834654586637 33.85461494903737 22.046149490373725 49 18.730181200453 22.52420724801812 38.15656851642129 20.589043035107586 50 19.263590033975085 22.753255945639864 36.29331823329559 21.689835787089468 51 19.133352208380522 21.92284824462061 34.572763306908264 24.3710362400906 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 107.0 1 1033.5 2 1960.0 3 21246.5 4 40533.0 5 30440.5 6 20348.0 7 19438.0 8 18528.0 9 18060.0 10 17592.0 11 16932.5 12 16273.0 13 15309.0 14 14345.0 15 13122.5 16 11900.0 17 11135.0 18 10370.0 19 9593.5 20 8817.0 21 8266.0 22 7715.0 23 7695.5 24 7676.0 25 7535.5 26 7659.0 27 7923.0 28 8613.0 29 9303.0 30 10619.5 31 11936.0 32 12465.0 33 12994.0 34 14661.5 35 16329.0 36 17319.5 37 18310.0 38 19425.5 39 20541.0 40 21360.5 41 22180.0 42 23027.0 43 23874.0 44 26150.5 45 28427.0 46 56917.0 47 85407.0 48 62880.0 49 40353.0 50 38683.0 51 37013.0 52 34553.5 53 32094.0 54 31524.0 55 30954.0 56 29708.5 57 28463.0 58 26496.5 59 24530.0 60 22404.0 61 20278.0 62 18251.5 63 16225.0 64 14197.5 65 12170.0 66 10183.0 67 8196.0 68 6854.0 69 5512.0 70 4574.5 71 3637.0 72 3018.0 73 2399.0 74 2053.0 75 1359.5 76 1012.0 77 812.0 78 612.0 79 455.5 80 299.0 81 196.5 82 94.0 83 68.5 84 43.0 85 28.5 86 14.0 87 8.5 88 3.0 89 4.5 90 6.0 91 4.5 92 3.0 93 1.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 706400.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.45551940283103 #Duplication Level Percentage of deduplicated Percentage of total 1 81.47205802928966 35.40410598480372 2 5.712349146221096 4.964661983187122 3 2.4880275869031028 3.243555932323399 4 1.7150977197617399 2.9812184895543017 5 1.3991907861891517 3.0401281178752546 6 1.158451264217043 3.0204660833650707 7 0.9740602242929561 2.962980508340195 8 0.8261595312724653 2.8720953232835527 9 0.7252003022864744 2.8362560226253937 >10 3.420889189476447 22.30091746569844 >50 0.06537521691113783 1.9856113876184998 >100 0.03716763350780831 2.8723513391031013 >500 0.001991123223632555 0.549579824948379 >1k 0.002654830964843407 2.6514234220679342 >5k 0.0 0.0 >10k+ 0.0013274154824217035 8.314648115205639 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 18347 2.5972536806342017 No Hit GAATCTGTCTCTTATACACATCTGACGCGGTAGCTATCGTATGCCGTCTTC 14425 2.042044167610419 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGGTAGCTATCGTATGCCG 13130 1.8587202718006794 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGGTAGCTATCGTATGC 11755 1.664071347678369 No Hit GAACTGTCTCTTATACACATCTGACGCGGTAGCTATCGTATGCCGTCTTCT 3810 0.5393544733861835 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGGTAGCTATCGTATGCCGTC 2754 0.38986409966024915 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGGTAGCTAT 2550 0.36098527746319364 No Hit GCTGTCTCTTATACACATCTGACGCGGTAGCTATCGTATGCCGTCTTCTGC 2395 0.33904303510758776 TruSeq Adapter, Index 13 (95% over 21bp) GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGGTAGCTATCGTA 2326 0.32927519818799544 No Hit GAATGACTGTCTCTTATACACATCTGACGCGGTAGCTATCGTATGCCGTCT 2160 0.30577576443941107 No Hit GCTCAACTTGACCCTGCATTAGAAATTGAAGACTGTAAATACAAAATAAAA 1270 0.17978482446206118 No Hit GAATGCTGTCTCTTATACACATCTGACGCGGTAGCTATCGTATGCCGTCTT 1121 0.15869195922989807 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCGGTAGCTATCGT 983 0.13915628539071348 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.052095130237825596 0.0 2 0.0 0.0 0.0 0.45101925254813136 0.0 3 0.0 0.0 0.0 0.5223669309173273 0.0 4 0.0 0.0 0.0 1.1693091732729333 0.0 5 0.0 0.0 0.0 3.585928652321631 0.0 6 0.0 0.0 0.0 3.834088335220838 0.0 7 0.0 0.0 0.0 4.253822197055492 0.0 8 0.0 0.0 0.0 4.781993204983013 0.0 9 0.0 0.0 0.0 4.873442808607021 0.0 10 0.0 0.0 0.0 7.1620894677236695 0.0 11 0.0 0.0 0.0 7.348952434881087 0.0 12 0.0 0.0 0.0 9.45300113250283 0.0 13 0.0 0.0 0.0 9.64977349943375 0.0 14 0.0 0.0 0.0 9.776047565118914 0.0 15 0.0 0.0 0.0 10.22777463193658 0.0 16 0.0 0.0 0.0 10.462768969422424 0.0 17 0.0 0.0 0.0 10.57757644394111 0.0 18 0.0 0.0 0.0 10.686013590033975 0.0 19 0.0 0.0 0.0 11.230181200453002 0.0 20 0.0 0.0 0.0 11.366506228765571 0.0 21 0.0 0.0 0.0 11.475084937712344 0.0 22 0.0 0.0 0.0 11.683748584371461 0.0 23 0.0 0.0 0.0 11.809456398640997 0.0 24 0.0 0.0 0.0 11.92199886749717 0.0 25 0.0 0.0 0.0 12.023924122310305 0.0 26 0.0 0.0 0.0 12.147508493771234 0.0 27 0.0 0.0 0.0 12.287938844847112 0.0 28 0.0 0.0 0.0 12.383776896942242 0.0 29 0.0 0.0 0.0 12.501840317100793 0.0 30 0.0 0.0 0.0 12.6388731596829 0.0 31 0.0 0.0 0.0 12.753822197055493 0.0 32 0.0 0.0 0.0 12.891704416761042 0.0 33 0.0 0.0 0.0 13.015430351075878 0.0 34 0.0 0.0 0.0 13.190543601359003 0.0 35 0.0 0.0 0.0 13.348103057757644 0.0 36 0.0 0.0 0.0 13.494337485843715 0.0 37 0.0 0.0 0.0 13.646517553793885 0.0 38 1.4156285390713478E-4 0.0 0.0 13.830832389580975 0.0 39 1.4156285390713478E-4 0.0 0.0 14.066251415628539 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTATACG 25 3.8892726E-5 45.000004 26 TATACGG 25 3.8892726E-5 45.000004 27 ACGATAC 20 7.031438E-4 45.0 3 TACGCGC 30 2.16431E-6 44.999996 34 TCATACG 30 2.16431E-6 44.999996 31 CGTTTTT 16090 0.0 44.300808 1 TGATACC 1585 0.0 42.728706 4 GATACCT 1600 0.0 42.60938 5 ATCGACG 70 0.0 41.785717 1 ACGGCTG 1400 0.0 41.785713 8 CCGATGA 340 0.0 41.691177 18 CGATGTG 65 0.0 41.538464 10 AGCTACG 65 0.0 41.538464 9 TACGGCT 1410 0.0 41.48936 7 CTACGAA 60 3.6379788E-12 41.249996 11 CGATGAA 360 0.0 40.625004 19 GAATGAT 5315 0.0 40.216366 1 ATGATAC 5160 0.0 40.159885 3 ATACCTG 1710 0.0 40.13158 6 GACCGAT 225 0.0 40.0 9 >>END_MODULE